RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 LRP2P98164 4655 aa9.7□□□□□ -0.86
SIK3-211ENST00000485363 UBE2BP63146 152 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 C9orf129Q5T035 196 aaKnown RBP9.69□□□□□ -0.86
SIK3-211ENST00000485363 ERASQ7Z444 233 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 GNB1LQ9BYB4 327 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
SIK3-211ENST00000485363 LINC01549A6NIU2 74 aa9.67□□□□□ -0.86
SIK3-211ENST00000485363 COX19Q49B96 90 aa9.67□□□□□ -0.86
SIK3-211ENST00000485363 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
SIK3-211ENST00000485363 F8VRH5 84 aa9.65□□□□□ -0.86
SIK3-211ENST00000485363 H0Y9J4 135 aa9.65□□□□□ -0.86
SIK3-211ENST00000485363 CXCL5P42830 114 aa9.65□□□□□ -0.86
SIK3-211ENST00000485363 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
SIK3-211ENST00000485363 LINC00469Q8N7U9 141 aa9.65□□□□□ -0.86
SIK3-211ENST00000485363 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
SIK3-211ENST00000485363 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
SIK3-211ENST00000485363 MRPL18Q9H0U6 180 aaKnown RBP9.63□□□□□ -0.87
SIK3-211ENST00000485363 SMIM1B2RUZ4 78 aa9.62□□□□□ -0.87
SIK3-211ENST00000485363 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
SIK3-211ENST00000485363 RHEBQ15382 184 aa9.62□□□□□ -0.87
SIK3-211ENST00000485363 PDZD11Q5EBL8 140 aa9.62□□□□□ -0.87
SIK3-211ENST00000485363 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
SIK3-211ENST00000485363 SMCO4Q9NRQ5 59 aa9.62□□□□□ -0.87
SIK3-211ENST00000485363 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
SIK3-211ENST00000485363 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
SIK3-211ENST00000485363 PMVKQ15126 192 aa9.6□□□□□ -0.87
SIK3-211ENST00000485363 CARHSP1Q9Y2V2 147 aaKnown RBP9.6□□□□□ -0.87
SIK3-211ENST00000485363 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
SIK3-211ENST00000485363 NUPR1O60356 82 aa9.58□□□□□ -0.88
SIK3-211ENST00000485363 TP73-AS1Q9UF72 201 aa9.58□□□□□ -0.88
SIK3-211ENST00000485363 SPINK8P0C7L1 97 aa9.57□□□□□ -0.88
SIK3-211ENST00000485363 H3BRM9 83 aa9.56□□□□□ -0.88
SIK3-211ENST00000485363 ZNF861PO60384 105 aa9.56□□□□□ -0.88
SIK3-211ENST00000485363 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
SIK3-211ENST00000485363 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
SIK3-211ENST00000485363 RNF213Q63HN8 5207 aa9.56□□□□□ -0.88
SIK3-211ENST00000485363 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
SIK3-211ENST00000485363 ATP5LO75964 103 aa9.53□□□□□ -0.88
SIK3-211ENST00000485363 LINC00614P0C842 121 aa9.53□□□□□ -0.88
SIK3-211ENST00000485363 IGLC3P0DOY3 106 aa9.53□□□□□ -0.88
SIK3-211ENST00000485363 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
SIK3-211ENST00000485363 NDUFA6P56556 154 aa9.53□□□□□ -0.88
SIK3-211ENST00000485363 RAB5BP61020 215 aa9.53□□□□□ -0.88
SIK3-211ENST00000485363 C18orf32Q8TCD1 76 aa9.53□□□□□ -0.88
SIK3-211ENST00000485363 A0A096LNJ9 63 aa9.52□□□□□ -0.89
SIK3-211ENST00000485363 HBDP02042 147 aa9.51□□□□□ -0.89
SIK3-211ENST00000485363 URB1-AS1Q96HZ7 61 aa9.51□□□□□ -0.89
SIK3-211ENST00000485363 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
SIK3-211ENST00000485363 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
SIK3-211ENST00000485363 BCE1O60756 84 aa9.5□□□□□ -0.89
SIK3-211ENST00000485363 APOC3P02656 99 aa9.5□□□□□ -0.89
SIK3-211ENST00000485363 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
SIK3-211ENST00000485363 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
SIK3-211ENST00000485363 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
SIK3-211ENST00000485363 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
SIK3-211ENST00000485363 NDUFA5Q16718 116 aa9.49□□□□□ -0.89
SIK3-211ENST00000485363 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
SIK3-211ENST00000485363 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
SIK3-211ENST00000485363 SNAPINO95295 136 aa9.48□□□□□ -0.89
SIK3-211ENST00000485363 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
SIK3-211ENST00000485363 SVBPQ8N300 66 aa9.48□□□□□ -0.89
SIK3-211ENST00000485363 PFN2P35080 140 aa9.47□□□□□ -0.89
SIK3-211ENST00000485363 LPAP08519 4548 aa9.46□□□□□ -0.89
SIK3-211ENST00000485363 BAGE3Q86Y29 109 aa9.46□□□□□ -0.9
SIK3-211ENST00000485363 COX17Q14061 63 aa9.45□□□□□ -0.9
SIK3-211ENST00000485363 ERG28Q9UKR5 140 aa9.45□□□□□ -0.9
SIK3-211ENST00000485363 C11orf86A6NJI1 115 aa9.44□□□□□ -0.9
SIK3-211ENST00000485363 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
SIK3-211ENST00000485363 SFTA2Q6UW10 78 aa9.44□□□□□ -0.9
SIK3-211ENST00000485363 UBE2AP49459 152 aa9.43□□□□□ -0.9
SIK3-211ENST00000485363 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
SIK3-211ENST00000485363 IGKV2-28A0A075B6P5 120 aa9.42□□□□□ -0.9
SIK3-211ENST00000485363 IGKV2D-28P01615 120 aa9.42□□□□□ -0.9
SIK3-211ENST00000485363 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
SIK3-211ENST00000485363 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
SIK3-211ENST00000485363 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
SIK3-211ENST00000485363 SCO1O75880 301 aa9.41□□□□□ -0.9
SIK3-211ENST00000485363 CRYGAP11844 174 aa9.41□□□□□ -0.9
SIK3-211ENST00000485363 VPREB1P12018 145 aa9.41□□□□□ -0.9
SIK3-211ENST00000485363 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
SIK3-211ENST00000485363 A0A087X002 238 aa9.4□□□□□ -0.9
SIK3-211ENST00000485363 KRTAP13-1Q8IUC0 172 aa9.4□□□□□ -0.9
SIK3-211ENST00000485363 PRR4Q16378 134 aa9.39□□□□□ -0.91
SIK3-211ENST00000485363 TYMSOSQ8TAI1 123 aa9.39□□□□□ -0.91
SIK3-211ENST00000485363 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
SIK3-211ENST00000485363 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
SIK3-211ENST00000485363 IFI27L1Q96BM0 104 aa9.38□□□□□ -0.91
SIK3-211ENST00000485363 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
SIK3-211ENST00000485363 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
SIK3-211ENST00000485363 TSPAN13O95857 204 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1172.7 ms