RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 KLK12Q9UKR0 248 aa17.83■□□□□ 0.44
SHOX2-204ENST00000483851 TRAV8-4A0A0B4J246 113 aa17.82■□□□□ 0.44
SHOX2-204ENST00000483851 DNHD1Q96M86 4753 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 TRBV20-1A0A075B6N2 111 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 TCL1BO95988 128 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 PRSS2P07478 247 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 IFITM1P13164 125 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 CIRBPQ14011 172 aaKnown RBP17.81■□□□□ 0.44
SHOX2-204ENST00000483851 LINC01556Q5JQF7 62 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 ERG28Q9UKR5 140 aa17.81■□□□□ 0.44
SHOX2-204ENST00000483851 PSMB2P49721 201 aa17.8■□□□□ 0.44
SHOX2-204ENST00000483851 COX7A2LO14548 114 aa17.8■□□□□ 0.44
SHOX2-204ENST00000483851 SMCPP49901 116 aaPredicted RBP17.8■□□□□ 0.44
SHOX2-204ENST00000483851 CRPP02741 224 aa17.79■□□□□ 0.44
SHOX2-204ENST00000483851 ENHOQ6UWT2 76 aa17.79■□□□□ 0.44
SHOX2-204ENST00000483851 MTURNQ8N3F0 131 aa17.78■□□□□ 0.44
SHOX2-204ENST00000483851 VPS25Q9BRG1 176 aa17.78■□□□□ 0.44
SHOX2-204ENST00000483851 Q8IZM0 81 aa17.76■□□□□ 0.43
SHOX2-204ENST00000483851 DNAH10OSP0CZ25 163 aa17.75■□□□□ 0.43
SHOX2-204ENST00000483851 CCL18P55774 89 aa17.75■□□□□ 0.43
SHOX2-204ENST00000483851 FOXI1Q12951 378 aa17.75■□□□□ 0.43
SHOX2-204ENST00000483851 ETDBQ3ZM63 59 aa17.75■□□□□ 0.43
SHOX2-204ENST00000483851 IGLV10-54A0A075B6I4 117 aa17.75■□□□□ 0.43
SHOX2-204ENST00000483851 TOMM7Q9P0U1 55 aa17.75■□□□□ 0.43
SHOX2-204ENST00000483851 UBE2WQ96B02 151 aa17.73■□□□□ 0.43
SHOX2-204ENST00000483851 TRBV30A0A0K0K1B3 111 aa17.72■□□□□ 0.43
SHOX2-204ENST00000483851 DAND5Q8N907 189 aa17.72■□□□□ 0.43
SHOX2-204ENST00000483851 DNAH9Q9NYC9 4486 aa17.72■□□□□ 0.43
SHOX2-204ENST00000483851 SCGB1C2P0DMR2 95 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 MALP21145 153 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 C6orf226Q5I0X4 101 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 LINC00588Q9Y4M8 146 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 GAGE12HA6NDE8 117 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 NPC2P61916 151 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 LINC00308Q8TCZ7 52 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 COPS9Q8WXC6 57 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 UPK3BQ9BT76 320 aa17.71■□□□□ 0.43
SHOX2-204ENST00000483851 H7C2G1 150 aa17.69■□□□□ 0.42
SHOX2-204ENST00000483851 CXCL5P42830 114 aa17.69■□□□□ 0.42
SHOX2-204ENST00000483851 PPDPFQ9H3Y8 114 aa17.69■□□□□ 0.42
SHOX2-204ENST00000483851 MEIG1Q5JSS6 88 aa17.69■□□□□ 0.42
SHOX2-204ENST00000483851 KLK5Q9Y337 293 aaPredicted RBP17.69■□□□□ 0.42
SHOX2-204ENST00000483851 IBA57-AS1B1ANH7 110 aa17.66■□□□□ 0.42
SHOX2-204ENST00000483851 TRIAP1O43715 76 aa17.66■□□□□ 0.42
SHOX2-204ENST00000483851 SOSTDC1Q6X4U4 206 aa17.66■□□□□ 0.42
SHOX2-204ENST00000483851 STAB2Q8WWQ8 2551 aa17.66■□□□□ 0.42
SHOX2-204ENST00000483851 KIAA0087Q14695 138 aa17.65■□□□□ 0.42
SHOX2-204ENST00000483851 Q1RN00 199 aa17.65■□□□□ 0.42
SHOX2-204ENST00000483851 COL7A1Q02388 2944 aa17.64■□□□□ 0.41
SHOX2-204ENST00000483851 CFAP161Q6P656 301 aa17.64■□□□□ 0.41
SHOX2-204ENST00000483851 M0QXV9 152 aa17.63■□□□□ 0.41
SHOX2-204ENST00000483851 CKS1BP61024 79 aa17.63■□□□□ 0.41
SHOX2-204ENST00000483851 KRTAP26-1Q6PEX3 210 aa17.62■□□□□ 0.41
SHOX2-204ENST00000483851 J3QR89 54 aa17.61■□□□□ 0.41
SHOX2-204ENST00000483851 LINC01600Q96MT4 127 aa17.61■□□□□ 0.41
SHOX2-204ENST00000483851 NUPR2A6NF83 97 aa17.61■□□□□ 0.41
SHOX2-204ENST00000483851 C1orf43Q9BWL3 253 aa17.61■□□□□ 0.41
SHOX2-204ENST00000483851 A0A0U1RRA0 63 aa17.6■□□□□ 0.41
SHOX2-204ENST00000483851 ATXN8Q156A1 80 aa17.6■□□□□ 0.41
SHOX2-204ENST00000483851 APLNQ9ULZ1 77 aa17.6■□□□□ 0.41
SHOX2-204ENST00000483851 RPL13AP40429 203 aaKnown RBP17.59■□□□□ 0.41
SHOX2-204ENST00000483851 TEN1Q86WV5 123 aa17.59■□□□□ 0.41
SHOX2-204ENST00000483851 PCP4P48539 62 aa17.57■□□□□ 0.4
SHOX2-204ENST00000483851 SLC25A20O43772 301 aa17.56■□□□□ 0.4
SHOX2-204ENST00000483851 SPAG11BQ08648 103 aa17.56■□□□□ 0.4
SHOX2-204ENST00000483851 LINC01620Q4KN68 170 aa17.56■□□□□ 0.4
SHOX2-204ENST00000483851 COX17Q14061 63 aa17.56■□□□□ 0.4
SHOX2-204ENST00000483851 CARD19Q96LW7 228 aa17.56■□□□□ 0.4
SHOX2-204ENST00000483851 C9JAW5 83 aa17.55■□□□□ 0.4
SHOX2-204ENST00000483851 LINC00158P58513 81 aa17.55■□□□□ 0.4
SHOX2-204ENST00000483851 C2orf82Q6UX34 121 aa17.54■□□□□ 0.4
SHOX2-204ENST00000483851 MIR7-3HGQ8N6C7 128 aa17.54■□□□□ 0.4
SHOX2-204ENST00000483851 COX6CP09669 75 aa17.53■□□□□ 0.4
SHOX2-204ENST00000483851 PPDPFLQ8WWR9 84 aa17.53■□□□□ 0.4
SHOX2-204ENST00000483851 MUC7Q8TAX7 377 aa17.52■□□□□ 0.39
SHOX2-204ENST00000483851 RMI2Q96E14 147 aa17.52■□□□□ 0.39
SHOX2-204ENST00000483851 IGKV2D-24A0A075B6R9 120 aa17.51■□□□□ 0.39
SHOX2-204ENST00000483851 ANKRD29Q8N6D5 301 aa17.51■□□□□ 0.39
SHOX2-204ENST00000483851 LST1O00453 97 aa17.49■□□□□ 0.39
SHOX2-204ENST00000483851 PFN2P35080 140 aa17.49■□□□□ 0.39
SHOX2-204ENST00000483851 NTN5Q8WTR8 489 aaPredicted RBP17.49■□□□□ 0.39
SHOX2-204ENST00000483851 GVQW2A0A096LPI5 108 aaPredicted RBP17.48■□□□□ 0.39
SHOX2-204ENST00000483851 TRBV10-2A0A0K0K1G8 114 aa17.48■□□□□ 0.39
SHOX2-204ENST00000483851 F8WDY8 70 aa17.48■□□□□ 0.39
SHOX2-204ENST00000483851 MEGF8Q7Z7M0 2845 aa17.47■□□□□ 0.39
SHOX2-204ENST00000483851 ZNF561-AS1K7EIQ3 104 aa17.46■□□□□ 0.39
SHOX2-204ENST00000483851 UBE2DNLQ8IWF7 75 aa17.46■□□□□ 0.39
SHOX2-204ENST00000483851 CLEC2BQ92478 149 aa17.46■□□□□ 0.39
SHOX2-204ENST00000483851 C2orf48Q96LS8 159 aa17.46■□□□□ 0.38
SHOX2-204ENST00000483851 Q9HAA7 133 aa17.46■□□□□ 0.38
SHOX2-204ENST00000483851 C15orf56Q8N910 161 aa17.44■□□□□ 0.38
SHOX2-204ENST00000483851 C6orf223Q8N319 242 aa17.44■□□□□ 0.38
SHOX2-204ENST00000483851 UNQ6190/PRO20217Q6UXQ8 127 aa17.43■□□□□ 0.38
SHOX2-204ENST00000483851 IGKV2-28A0A075B6P5 120 aa17.41■□□□□ 0.38
SHOX2-204ENST00000483851 IGKV2D-28P01615 120 aa17.41■□□□□ 0.38
SHOX2-204ENST00000483851 SND1-IT1Q9HBX3 110 aa17.41■□□□□ 0.38
SHOX2-204ENST00000483851 PRKDCP78527 4128 aaKnown RBP17.41■□□□□ 0.38
SHOX2-204ENST00000483851 DYNC2H1Q8NCM8 4307 aaKnown RBP17.4■□□□□ 0.38
SHOX2-204ENST00000483851 C10orf25Q5T742 122 aa17.4■□□□□ 0.38
SHOX2-204ENST00000483851 TRAV13-2A0A0B4J235 113 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms