RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 ODF1Q14990 250 aa13.19□□□□□ -0.3
SYPL1-206ENST00000483448 Q8IZM0 81 aa13.19□□□□□ -0.3
SYPL1-206ENST00000483448 M0QXV9 152 aa13.18□□□□□ -0.3
SYPL1-206ENST00000483448 IGLV7-43P04211 117 aa13.18□□□□□ -0.3
SYPL1-206ENST00000483448 FABP9Q0Z7S8 132 aa13.17□□□□□ -0.3
SYPL1-206ENST00000483448 COX19Q49B96 90 aa13.17□□□□□ -0.3
SYPL1-206ENST00000483448 TNXBP22105 4242 aa13.16□□□□□ -0.3
SYPL1-206ENST00000483448 C9orf129Q5T035 196 aaKnown RBP13.16□□□□□ -0.3
SYPL1-206ENST00000483448 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
SYPL1-206ENST00000483448 KRTAP11-1Q8IUC1 163 aa13.16□□□□□ -0.3
SYPL1-206ENST00000483448 LINC00469Q8N7U9 141 aa13.16□□□□□ -0.3
SYPL1-206ENST00000483448 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
SYPL1-206ENST00000483448 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
SYPL1-206ENST00000483448 KRTAP7-1Q8IUC3 87 aa13.15□□□□□ -0.3
SYPL1-206ENST00000483448 MRPL18Q9H0U6 180 aaKnown RBP13.15□□□□□ -0.3
SYPL1-206ENST00000483448 SMCO4Q9NRQ5 59 aa13.15□□□□□ -0.3
SYPL1-206ENST00000483448 LINC01549A6NIU2 74 aa13.14□□□□□ -0.31
SYPL1-206ENST00000483448 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
SYPL1-206ENST00000483448 F8VRH5 84 aa13.12□□□□□ -0.31
SYPL1-206ENST00000483448 RHEBQ15382 184 aa13.12□□□□□ -0.31
SYPL1-206ENST00000483448 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
SYPL1-206ENST00000483448 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
SYPL1-206ENST00000483448 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
SYPL1-206ENST00000483448 UBR4Q5T4S7 5183 aa13.1□□□□□ -0.31
SYPL1-206ENST00000483448 C10orf91Q5T1B1 145 aa13.1□□□□□ -0.31
SYPL1-206ENST00000483448 CXCL5P42830 114 aa13.09□□□□□ -0.31
SYPL1-206ENST00000483448 PDZD11Q5EBL8 140 aa13.09□□□□□ -0.31
SYPL1-206ENST00000483448 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
SYPL1-206ENST00000483448 CARHSP1Q9Y2V2 147 aaKnown RBP13.09□□□□□ -0.31
SYPL1-206ENST00000483448 SMIM1B2RUZ4 78 aa13.08□□□□□ -0.32
SYPL1-206ENST00000483448 H0Y9J4 135 aa13.08□□□□□ -0.32
SYPL1-206ENST00000483448 PMVKQ15126 192 aa13.08□□□□□ -0.32
SYPL1-206ENST00000483448 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
SYPL1-206ENST00000483448 LBHQ53QV2 105 aaPredicted RBP13.07□□□□□ -0.32
SYPL1-206ENST00000483448 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
SYPL1-206ENST00000483448 NDUFA6P56556 154 aa13.06□□□□□ -0.32
SYPL1-206ENST00000483448 TRAPPC1Q9Y5R8 145 aa13.06□□□□□ -0.32
SYPL1-206ENST00000483448 PRR26Q8N8Z3 221 aa13.05□□□□□ -0.32
SYPL1-206ENST00000483448 IGLV5-45A0A087WSX0 123 aa13.04□□□□□ -0.32
SYPL1-206ENST00000483448 H3BRM9 83 aa13.03□□□□□ -0.32
SYPL1-206ENST00000483448 RAB5BP61020 215 aa13.03□□□□□ -0.32
SYPL1-206ENST00000483448 APOC3P02656 99 aa13.01□□□□□ -0.33
SYPL1-206ENST00000483448 LINC00614P0C842 121 aa13.01□□□□□ -0.33
SYPL1-206ENST00000483448 NUPR1O60356 82 aa12.99□□□□□ -0.33
SYPL1-206ENST00000483448 MRPL55Q7Z7F7 128 aaKnown RBP12.99□□□□□ -0.33
SYPL1-206ENST00000483448 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
SYPL1-206ENST00000483448 ATP5LO75964 103 aa12.98□□□□□ -0.33
SYPL1-206ENST00000483448 NDUFA5Q16718 116 aa12.98□□□□□ -0.33
SYPL1-206ENST00000483448 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
SYPL1-206ENST00000483448 ZNF861PO60384 105 aa12.97□□□□□ -0.33
SYPL1-206ENST00000483448 PMCHL1Q16048 86 aa12.97□□□□□ -0.33
SYPL1-206ENST00000483448 IGLV1-50A0A075B6I6 118 aa12.96□□□□□ -0.33
SYPL1-206ENST00000483448 A0A096LNJ9 63 aa12.96□□□□□ -0.33
SYPL1-206ENST00000483448 SNAPINO95295 136 aa12.96□□□□□ -0.33
SYPL1-206ENST00000483448 HBDP02042 147 aa12.96□□□□□ -0.33
SYPL1-206ENST00000483448 IGLC3P0DOY3 106 aa12.96□□□□□ -0.33
SYPL1-206ENST00000483448 URB1-AS1Q96HZ7 61 aa12.96□□□□□ -0.33
SYPL1-206ENST00000483448 GAGE10A6NGK3 116 aa12.95□□□□□ -0.34
SYPL1-206ENST00000483448 SVBPQ8N300 66 aa12.95□□□□□ -0.34
SYPL1-206ENST00000483448 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
SYPL1-206ENST00000483448 RPL37AP8A6NKH3 93 aa12.94□□□□□ -0.34
SYPL1-206ENST00000483448 KRTAP1-4P0C5Y4 121 aa12.93□□□□□ -0.34
SYPL1-206ENST00000483448 PFN2P35080 140 aa12.93□□□□□ -0.34
SYPL1-206ENST00000483448 NKAPP1Q8N9T2 125 aa12.93□□□□□ -0.34
SYPL1-206ENST00000483448 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
SYPL1-206ENST00000483448 BAGE3Q86Y29 109 aa12.92□□□□□ -0.34
SYPL1-206ENST00000483448 BCE1O60756 84 aa12.91□□□□□ -0.34
SYPL1-206ENST00000483448 RPL28P46779 137 aaKnown RBP12.91□□□□□ -0.34
SYPL1-206ENST00000483448 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
SYPL1-206ENST00000483448 RPL13AP40429 203 aaKnown RBP12.9□□□□□ -0.34
SYPL1-206ENST00000483448 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
SYPL1-206ENST00000483448 LRP2P98164 4655 aa12.89□□□□□ -0.35
SYPL1-206ENST00000483448 IGLV5-37A0A075B6J1 123 aa12.87□□□□□ -0.35
SYPL1-206ENST00000483448 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
SYPL1-206ENST00000483448 C11orf86A6NJI1 115 aa12.86□□□□□ -0.35
SYPL1-206ENST00000483448 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
SYPL1-206ENST00000483448 CHTOPQ9Y3Y2 248 aaKnown RBP12.85□□□□□ -0.35
SYPL1-206ENST00000483448 SCO1O75880 301 aa12.84□□□□□ -0.35
SYPL1-206ENST00000483448 UBE2AP49459 152 aa12.84□□□□□ -0.35
SYPL1-206ENST00000483448 IGKV2-28A0A075B6P5 120 aa12.83□□□□□ -0.36
SYPL1-206ENST00000483448 IGKV2D-28P01615 120 aa12.83□□□□□ -0.36
SYPL1-206ENST00000483448 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
SYPL1-206ENST00000483448 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
SYPL1-206ENST00000483448 COX17Q14061 63 aa12.82□□□□□ -0.36
SYPL1-206ENST00000483448 CHCHD1Q96BP2 118 aaKnown RBP12.82□□□□□ -0.36
SYPL1-206ENST00000483448 SFTA2Q6UW10 78 aa12.8□□□□□ -0.36
SYPL1-206ENST00000483448 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
SYPL1-206ENST00000483448 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
SYPL1-206ENST00000483448 CRYGAP11844 174 aa12.78□□□□□ -0.36
SYPL1-206ENST00000483448 VPREB1P12018 145 aa12.78□□□□□ -0.36
SYPL1-206ENST00000483448 LINC00158P58513 81 aa12.78□□□□□ -0.36
SYPL1-206ENST00000483448 TRAV12-1A0A0B4J245 112 aa12.77□□□□□ -0.37
SYPL1-206ENST00000483448 PRR4Q16378 134 aa12.77□□□□□ -0.37
SYPL1-206ENST00000483448 TSPAN13O95857 204 aa12.76□□□□□ -0.37
SYPL1-206ENST00000483448 CBLN2Q8IUK8 224 aa12.76□□□□□ -0.37
SYPL1-206ENST00000483448 TYMSOSQ8TAI1 123 aa12.76□□□□□ -0.37
SYPL1-206ENST00000483448 ANAPC11Q9NYG5 84 aa12.76□□□□□ -0.37
SYPL1-206ENST00000483448 A0A087X002 238 aa12.75□□□□□ -0.37
SYPL1-206ENST00000483448 A0A0U1RRA0 63 aa12.75□□□□□ -0.37
SYPL1-206ENST00000483448 TMEM223A0PJW6 202 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms