RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
PHGDH-205ENST00000482968 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-205ENST00000482968 KRTAP3-3Q9BYR6 98 aa10.11□□□□□ -0.79
PHGDH-205ENST00000482968 KRTAP3-2Q9BYR7 98 aa10.11□□□□□ -0.79
PHGDH-205ENST00000482968 KRTAP1-5Q9BYS1 174 aa10.11□□□□□ -0.79
PHGDH-205ENST00000482968 APOMO95445 188 aa10.1□□□□□ -0.79
PHGDH-205ENST00000482968 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
PHGDH-205ENST00000482968 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
PHGDH-205ENST00000482968 LINC00476Q8WZB0 136 aa10.1□□□□□ -0.79
PHGDH-205ENST00000482968 TRAV8-4A0A0B4J246 113 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 HERVK_113P63121 156 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 TRAV8-3A0A0A6YYJ7 113 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 NBDYA0A0U1RRE5 68 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 M0R2N4 97 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 CDKN2A-AS1Q9UH64 79 aa10.09□□□□□ -0.79
PHGDH-205ENST00000482968 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-205ENST00000482968 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
PHGDH-205ENST00000482968 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
PHGDH-205ENST00000482968 IGKV2D-24A0A075B6R9 120 aa10.07□□□□□ -0.8
PHGDH-205ENST00000482968 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
PHGDH-205ENST00000482968 C1orf43Q9BWL3 253 aa10.07□□□□□ -0.8
PHGDH-205ENST00000482968 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
PHGDH-205ENST00000482968 FOXI1Q12951 378 aa10.06□□□□□ -0.8
PHGDH-205ENST00000482968 TTC32Q5I0X7 151 aa10.06□□□□□ -0.8
PHGDH-205ENST00000482968 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
PHGDH-205ENST00000482968 VPS13DQ5THJ4 4388 aa10.06□□□□□ -0.8
PHGDH-205ENST00000482968 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
PHGDH-205ENST00000482968 PPDPFLQ8WWR9 84 aa10.05□□□□□ -0.8
PHGDH-205ENST00000482968 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
PHGDH-205ENST00000482968 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
PHGDH-205ENST00000482968 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 SPINK8P0C7L1 97 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 PSMB2P49721 201 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 KRTAP26-1Q6PEX3 210 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 A0A087WZ39 114 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 M0QXV9 152 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 COX7A2LO14548 114 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 RMI2Q96E14 147 aa10.03□□□□□ -0.8
PHGDH-205ENST00000482968 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
PHGDH-205ENST00000482968 TSPAN13O95857 204 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 MALP21145 153 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 CKS1BP61024 79 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 KMT2AQ03164 3969 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 SCGB1C2P0DMR2 95 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 Q6ZR54 194 aa10.01□□□□□ -0.81
PHGDH-205ENST00000482968 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
PHGDH-205ENST00000482968 PRO1854Q9UHT4 67 aa10□□□□□ -0.81
PHGDH-205ENST00000482968 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-205ENST00000482968 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
PHGDH-205ENST00000482968 PLEKHB2Q96CS7 222 aa9.98□□□□□ -0.81
PHGDH-205ENST00000482968 J3QQQ9 107 aa9.98□□□□□ -0.81
PHGDH-205ENST00000482968 LEPROTO15243 131 aa9.98□□□□□ -0.81
PHGDH-205ENST00000482968 PSCAO43653 123 aa9.98□□□□□ -0.81
PHGDH-205ENST00000482968 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
PHGDH-205ENST00000482968 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
PHGDH-205ENST00000482968 ALMS1Q8TCU4 4167 aa9.97□□□□□ -0.81
PHGDH-205ENST00000482968 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.81
PHGDH-205ENST00000482968 C6orf223Q8N319 242 aa9.96□□□□□ -0.81
PHGDH-205ENST00000482968 A0A0B4J2C4 111 aa9.96□□□□□ -0.82
PHGDH-205ENST00000482968 LCE6AA0A183 80 aa9.95□□□□□ -0.82
PHGDH-205ENST00000482968 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
PHGDH-205ENST00000482968 CFC1P0CG37 223 aa9.95□□□□□ -0.82
PHGDH-205ENST00000482968 ERG28Q9UKR5 140 aa9.95□□□□□ -0.82
PHGDH-205ENST00000482968 LECT2O14960 151 aa9.94□□□□□ -0.82
PHGDH-205ENST00000482968 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
PHGDH-205ENST00000482968 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
PHGDH-205ENST00000482968 Q6ZRN7 208 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-205ENST00000482968 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
PHGDH-205ENST00000482968 TCL1BO95988 128 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-205ENST00000482968 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 PRSS2P07478 247 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 ATXN8Q156A1 80 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 C15orf56Q8N910 161 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
PHGDH-205ENST00000482968 USP17L23D6RBM5 183 aa9.92□□□□□ -0.82
PHGDH-205ENST00000482968 HYDINQ4G0P3 5121 aa9.92□□□□□ -0.82
PHGDH-205ENST00000482968 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
PHGDH-205ENST00000482968 KIAA0087Q14695 138 aa9.91□□□□□ -0.82
PHGDH-205ENST00000482968 Q8IZM0 81 aa9.91□□□□□ -0.82
PHGDH-205ENST00000482968 DNAH10Q8IVF4 4471 aa9.91□□□□□ -0.82
PHGDH-205ENST00000482968 ZNF561-AS1K7EIQ3 104 aa9.91□□□□□ -0.82
PHGDH-205ENST00000482968 SLC25A20O43772 301 aa9.91□□□□□ -0.82
PHGDH-205ENST00000482968 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
PHGDH-205ENST00000482968 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
PHGDH-205ENST00000482968 COX6CP09669 75 aa9.89□□□□□ -0.83
PHGDH-205ENST00000482968 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
PHGDH-205ENST00000482968 DNAH6Q9C0G6 4158 aa9.89□□□□□ -0.83
PHGDH-205ENST00000482968 A4D1N5 150 aa9.88□□□□□ -0.83
PHGDH-205ENST00000482968 Q1RN00 199 aa9.88□□□□□ -0.83
PHGDH-205ENST00000482968 GVQW2A0A096LPI5 108 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-205ENST00000482968 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
PHGDH-205ENST00000482968 ANKRD29Q8N6D5 301 aa9.88□□□□□ -0.83
PHGDH-205ENST00000482968 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-205ENST00000482968 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms