RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	IQSEC2	Q5JU85	1478 aa		0.15	□□□□□ -2.39
CCNL1-223	ENST00000481173	LRP1	Q07954	4544 aa	Known RBP	0.15	□□□□□ -2.39
CCNL1-223	ENST00000481173	CUL7	Q14999	1698 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CSMD3	Q7Z407	3707 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	TNC	P24821	2201 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CACNA1A	O00555	2505 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	FLNA	P21333	2647 aa	Known RBP	0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	AHCTF1	Q8WYP5	2266 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CPSF4L	A6NMK7	179 aa	Known RBP	0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173		K7EQZ3	153 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CCL22	O00626	93 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	PLGLA	Q15195	96 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	PYY3	Q5JQD4	70 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	DEFB105A	Q8NG35	78 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	C2CD3	Q4AC94	2353 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CCNB3	Q8WWL7	1395 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CACNA1C	Q13936	2221 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	TET3	O43151	1660 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	KDM5A	P29375	1690 aa	Known RBP	0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	CHD6	Q8TD26	2715 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	MYH9	P35579	1960 aa	Known RBP	0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	PKD1L1	Q8TDX9	2849 aa		0.14	□□□□□ -2.39
CCNL1-223	ENST00000481173	EDC4	Q6P2E9	1401 aa	Known RBP	0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	EPRS	P07814	1512 aa	Known RBP	0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	TULP4	Q9NRJ4	1543 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	SPHKAP	Q2M3C7	1700 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	FOCAD	Q5VW36	1801 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173		A0A1B0GUT8	65 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	PVALEF	A0A1B0GWK0	134 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	HMGN2	P05204	90 aa	Known RBP	0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	SNHG12	Q9BXW3	62 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	RABAC1	Q9UI14	185 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	ROBO1	Q9Y6N7	1651 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	ATR	Q13535	2644 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	PATJ	Q8NI35	1801 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	ARFGEF1	Q9Y6D6	1849 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	TOP2B	Q02880	1626 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	CLIP1	P30622	1438 aa		0.13	□□□□□ -2.39
CCNL1-223	ENST00000481173	SETX	Q7Z333	2677 aa	Known RBP	0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	SPTBN1	Q01082	2364 aa	Known RBP	0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	ATP10B	O94823	1461 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	PLEKHH2	Q8IVE3	1493 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	NLRP1	Q9C000	1473 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173		F8WEM9	126 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	NDUFB1	O75438	58 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	ACYP1	P07311	99 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	SNRPF	P62306	86 aa	Known RBP	0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	APLN	Q9ULZ1	77 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	SBF2	Q86WG5	1849 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173		A0A0G2JMZ2	1700 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	PAPPA	Q13219	1627 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	PKDREJ	Q9NTG1	2253 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	PTPRQ	Q9UMZ3	2332 aa		0.12	□□□□□ -2.39
CCNL1-223	ENST00000481173	KDM3B	Q7LBC6	1761 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	MYH7	P12883	1935 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	FANCA	O15360	1455 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	ABCC10	Q5T3U5	1492 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	PLIN4	Q96Q06	1357 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	KANTR	A0A1W2PQU2	76 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	IGLC2	P0DOY2	106 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	IGLC3	P0DOY3	106 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	DEFB112	Q30KQ8	113 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	NMS	Q5H8A3	153 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	HEPN1	Q6WQI6	88 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	S100A16	Q96FQ6	103 aa	Known RBP	0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	CELSR1	Q9NYQ6	3014 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	DCHS2	Q6V1P9	2916 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	DOCK1	Q14185	1865 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	CUX1	P39880	1505 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	TRO	Q12816	1431 aa	Predicted RBP	0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	ARHGEF5	Q12774	1597 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	SPTA1	P02549	2419 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	GVINP1	Q7Z2Y8	2422 aa		0.11	□□□□□ -2.39
CCNL1-223	ENST00000481173	DOCK2	Q92608	1830 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	WNK3	Q9BYP7	1800 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	SHROOM2	Q13796	1616 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	CC2D2A	Q9P2K1	1620 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	DOPEY2	Q9Y3R5	2298 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	GNG2	P59768	71 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	COX6B2	Q6YFQ2	88 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	LINC00643	Q86TS7	51 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	GAFA1	Q96PS6	74 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	SPRR2G	Q9BYE4	73 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	HIGD1B	Q9P298	99 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	CDKN2A-AS1	Q9UH64	79 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	UBE2D4	Q9Y2X8	147 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	TOPAZ1	Q8N9V7	1692 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	TRANK1	O15050	2925 aa		0.1	□□□□□ -2.39
CCNL1-223	ENST00000481173	VWF	P04275	2813 aa		0.09	□□□□□ -2.39
CCNL1-223	ENST00000481173	CHD8	Q9HCK8	2581 aa		0.09	□□□□□ -2.39
CCNL1-223	ENST00000481173	MYH8	P13535	1937 aa		0.09	□□□□□ -2.39
CCNL1-223	ENST00000481173	GPR98	Q8WXG9	6306 aa		0.09	□□□□□ -2.39
CCNL1-223	ENST00000481173	PPRC1	Q5VV67	1664 aa	Known RBP	0.09	□□□□□ -2.39
CCNL1-223	ENST00000481173	ZNF236	Q9UL36	1845 aa		0.09	□□□□□ -2.39
CCNL1-223	ENST00000481173	MYMX	A0A1B0GTQ4	84 aa		0.09	□□□□□ -2.4
CCNL1-223	ENST00000481173	CEBPZOS	A8MTT3	80 aa		0.09	□□□□□ -2.4

Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms