RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
CCNL1-223ENST00000481173 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
CCNL1-223ENST00000481173 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
CCNL1-223ENST00000481173 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
CCNL1-223ENST00000481173 FOXD1Q16676 465 aa20.27■□□□□ 0.84
CCNL1-223ENST00000481173 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
CCNL1-223ENST00000481173 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
CCNL1-223ENST00000481173 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
CCNL1-223ENST00000481173 MSH5O43196 834 aa18.94■□□□□ 0.62
CCNL1-223ENST00000481173 ADRA2BP18089 450 aa18.9■□□□□ 0.62
CCNL1-223ENST00000481173 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
CCNL1-223ENST00000481173 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
CCNL1-223ENST00000481173 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
CCNL1-223ENST00000481173 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
CCNL1-223ENST00000481173 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
CCNL1-223ENST00000481173 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
CCNL1-223ENST00000481173 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
CCNL1-223ENST00000481173 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
CCNL1-223ENST00000481173 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
CCNL1-223ENST00000481173 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
CCNL1-223ENST00000481173 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
CCNL1-223ENST00000481173 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
CCNL1-223ENST00000481173 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
CCNL1-223ENST00000481173 C1QBPQ07021 282 aaKnown RBP15.91■□□□□ 0.14
CCNL1-223ENST00000481173 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
CCNL1-223ENST00000481173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.122e-9■■■□□ 15.3
CCNL1-223ENST00000481173 KCNA4P22459 653 aa15.69■□□□□ 0.1
CCNL1-223ENST00000481173 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
CCNL1-223ENST00000481173 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
CCNL1-223ENST00000481173 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
CCNL1-223ENST00000481173 CAPN15O75808 1086 aa15.26■□□□□ 0.03
CCNL1-223ENST00000481173 DSG3P32926 999 aa15.15■□□□□ 0.02
CCNL1-223ENST00000481173 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
CCNL1-223ENST00000481173 APLP2Q06481 763 aa14.96□□□□□ -0.01
CCNL1-223ENST00000481173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
CCNL1-223ENST00000481173 ABCB7O75027 752 aa14.94□□□□□ -0.02
CCNL1-223ENST00000481173 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
CCNL1-223ENST00000481173 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
CCNL1-223ENST00000481173 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
CCNL1-223ENST00000481173 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
CCNL1-223ENST00000481173 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
CCNL1-223ENST00000481173 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
CCNL1-223ENST00000481173 POLA2Q14181 598 aa14.58□□□□□ -0.08
CCNL1-223ENST00000481173 POTEHQ6S545 545 aa14.58□□□□□ -0.08
CCNL1-223ENST00000481173 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
CCNL1-223ENST00000481173 ZBTB22O15209 634 aa14.43□□□□□ -0.1
CCNL1-223ENST00000481173 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
CCNL1-223ENST00000481173 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
CCNL1-223ENST00000481173 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
CCNL1-223ENST00000481173 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
CCNL1-223ENST00000481173 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
CCNL1-223ENST00000481173 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
CCNL1-223ENST00000481173 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
CCNL1-223ENST00000481173 FBLN2P98095 1184 aa13.89□□□□□ -0.19
CCNL1-223ENST00000481173 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
CCNL1-223ENST00000481173 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
CCNL1-223ENST00000481173 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-223ENST00000481173 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
CCNL1-223ENST00000481173 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
CCNL1-223ENST00000481173 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
CCNL1-223ENST00000481173 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
CCNL1-223ENST00000481173 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCNL1-223ENST00000481173 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
CCNL1-223ENST00000481173 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-223ENST00000481173 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
CCNL1-223ENST00000481173 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
CCNL1-223ENST00000481173 HAX1O00165 279 aa13.6□□□□□ -0.23
CCNL1-223ENST00000481173 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
CCNL1-223ENST00000481173 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
CCNL1-223ENST00000481173 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
CCNL1-223ENST00000481173 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCNL1-223ENST00000481173 EVX2Q03828 476 aa13.45□□□□□ -0.26
CCNL1-223ENST00000481173 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
CCNL1-223ENST00000481173 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
CCNL1-223ENST00000481173 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
CCNL1-223ENST00000481173 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
CCNL1-223ENST00000481173 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
CCNL1-223ENST00000481173 GABBR2O75899 941 aa13.11□□□□□ -0.31
CCNL1-223ENST00000481173 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
CCNL1-223ENST00000481173 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
CCNL1-223ENST00000481173 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
CCNL1-223ENST00000481173 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
CCNL1-223ENST00000481173 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
CCNL1-223ENST00000481173 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
CCNL1-223ENST00000481173 LHX8Q68G74 356 aa12.8□□□□□ -0.36
CCNL1-223ENST00000481173 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
CCNL1-223ENST00000481173 CLCN6P51797 869 aa12.77□□□□□ -0.37
CCNL1-223ENST00000481173 PROM2Q8N271 834 aa12.75□□□□□ -0.37
CCNL1-223ENST00000481173 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
CCNL1-223ENST00000481173 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
CCNL1-223ENST00000481173 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
CCNL1-223ENST00000481173 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCNL1-223ENST00000481173 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
CCNL1-223ENST00000481173 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-223ENST00000481173 MIER1Q8N108 512 aa12.54□□□□□ -0.4
CCNL1-223ENST00000481173 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
CCNL1-223ENST00000481173 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
CCNL1-223ENST00000481173 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
CCNL1-223ENST00000481173 FKBP8Q14318 412 aa12.46□□□□□ -0.41
CCNL1-223ENST00000481173 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms