RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 TOMM7Q9P0U1 55 aa9.27□□□□□ -0.93
TDP2-205ENST00000480495 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
TDP2-205ENST00000480495 CDKN2A-AS1Q9UH64 79 aa9.27□□□□□ -0.93
TDP2-205ENST00000480495 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.93
TDP2-205ENST00000480495 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
TDP2-205ENST00000480495 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
TDP2-205ENST00000480495 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
TDP2-205ENST00000480495 FAM168BA1KXE4 195 aa9.25□□□□□ -0.93
TDP2-205ENST00000480495 TINCRA0A1B0GVN0 87 aa9.24□□□□□ -0.93
TDP2-205ENST00000480495 C1orf137Q5JT78 98 aa9.24□□□□□ -0.93
TDP2-205ENST00000480495 FAM19A5Q7Z5A7 132 aaPredicted RBP9.24□□□□□ -0.93
TDP2-205ENST00000480495 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
TDP2-205ENST00000480495 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
TDP2-205ENST00000480495 IGLV5-45A0A087WSX0 123 aa9.22□□□□□ -0.93
TDP2-205ENST00000480495 F8VRH5 84 aa9.22□□□□□ -0.93
TDP2-205ENST00000480495 CXCL5P42830 114 aa9.22□□□□□ -0.93
TDP2-205ENST00000480495 PMVKQ15126 192 aa9.22□□□□□ -0.93
TDP2-205ENST00000480495 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
TDP2-205ENST00000480495 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 M0QXV9 152 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 SNAPINO95295 136 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 APOC3P02656 99 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 PDZD11Q5EBL8 140 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.94
TDP2-205ENST00000480495 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 SVBPQ8N300 66 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
TDP2-205ENST00000480495 TNXBP22105 4242 aa9.2□□□□□ -0.94
TDP2-205ENST00000480495 KRTAP10-8P60410 259 aa9.2□□□□□ -0.94
TDP2-205ENST00000480495 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
TDP2-205ENST00000480495 IGLV7-43P04211 117 aa9.19□□□□□ -0.94
TDP2-205ENST00000480495 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
TDP2-205ENST00000480495 LINC00614P0C842 121 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 UBE2BP63146 152 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 ODF1Q14990 250 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 COX7B2Q8TF08 81 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
TDP2-205ENST00000480495 H3BRM9 83 aa9.17□□□□□ -0.94
TDP2-205ENST00000480495 A0A096LNJ9 63 aa9.16□□□□□ -0.94
TDP2-205ENST00000480495 RAB5BP61020 215 aa9.16□□□□□ -0.94
TDP2-205ENST00000480495 URB1-AS1Q96HZ7 61 aa9.16□□□□□ -0.94
TDP2-205ENST00000480495 HBDP02042 147 aa9.15□□□□□ -0.94
TDP2-205ENST00000480495 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
TDP2-205ENST00000480495 IGLC3P0DOY3 106 aa9.15□□□□□ -0.94
TDP2-205ENST00000480495 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
TDP2-205ENST00000480495 NDUFA6P56556 154 aa9.14□□□□□ -0.95
TDP2-205ENST00000480495 LBHQ53QV2 105 aaPredicted RBP9.14□□□□□ -0.95
TDP2-205ENST00000480495 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
TDP2-205ENST00000480495 H0Y9J4 135 aa9.13□□□□□ -0.95
TDP2-205ENST00000480495 ATP5LO75964 103 aa9.13□□□□□ -0.95
TDP2-205ENST00000480495 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
TDP2-205ENST00000480495 IGLV5-39A0A0G2JS06 123 aa9.11□□□□□ -0.95
TDP2-205ENST00000480495 NUPR1O60356 82 aa9.11□□□□□ -0.95
TDP2-205ENST00000480495 PMCHL1Q16048 86 aa9.11□□□□□ -0.95
TDP2-205ENST00000480495 YPEL4Q96NS1 127 aa9.11□□□□□ -0.95
TDP2-205ENST00000480495 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
TDP2-205ENST00000480495 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
TDP2-205ENST00000480495 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
TDP2-205ENST00000480495 CHCHD1Q96BP2 118 aaKnown RBP9.08□□□□□ -0.96
TDP2-205ENST00000480495 ZNF861PO60384 105 aa9.07□□□□□ -0.96
TDP2-205ENST00000480495 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
TDP2-205ENST00000480495 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
TDP2-205ENST00000480495 TMEM170BQ5T4T1 132 aa9.06□□□□□ -0.96
TDP2-205ENST00000480495 SFTA2Q6UW10 78 aa9.06□□□□□ -0.96
TDP2-205ENST00000480495 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
TDP2-205ENST00000480495 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
TDP2-205ENST00000480495 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
TDP2-205ENST00000480495 LINC00167Q96N53 147 aa9.05□□□□□ -0.96
TDP2-205ENST00000480495 CHTOPQ9Y3Y2 248 aaKnown RBP9.05□□□□□ -0.96
TDP2-205ENST00000480495 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 BCE1O60756 84 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 PFN2P35080 140 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 COX17Q14061 63 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 NKAPP1Q8N9T2 125 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 IFI27L1Q96BM0 104 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
TDP2-205ENST00000480495 CBLN2Q8IUK8 224 aa9.03□□□□□ -0.96
TDP2-205ENST00000480495 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
TDP2-205ENST00000480495 RPL13AP40429 203 aaKnown RBP9.02□□□□□ -0.97
TDP2-205ENST00000480495 RPL28P46779 137 aaKnown RBP9.02□□□□□ -0.97
TDP2-205ENST00000480495 GAGE10A6NGK3 116 aa9.01□□□□□ -0.97
TDP2-205ENST00000480495 HSBP1O75506 76 aa9□□□□□ -0.97
TDP2-205ENST00000480495 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
TDP2-205ENST00000480495 SND1-IT1Q9HBX3 110 aa9□□□□□ -0.97
TDP2-205ENST00000480495 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
TDP2-205ENST00000480495 RPL24P83731 157 aaKnown RBP8.99□□□□□ -0.97
TDP2-205ENST00000480495 UBR4Q5T4S7 5183 aa8.99□□□□□ -0.97
TDP2-205ENST00000480495 TRGC2P03986 189 aa8.98□□□□□ -0.97
TDP2-205ENST00000480495 VPREB1P12018 145 aa8.98□□□□□ -0.97
TDP2-205ENST00000480495 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
TDP2-205ENST00000480495 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
TDP2-205ENST00000480495 SCO1O75880 301 aa8.95□□□□□ -0.98
TDP2-205ENST00000480495 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
TDP2-205ENST00000480495 UBE2AP49459 152 aa8.95□□□□□ -0.98
TDP2-205ENST00000480495 LINC00158P58513 81 aa8.95□□□□□ -0.98
TDP2-205ENST00000480495 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
TDP2-205ENST00000480495 SLC7A5P1Q8MH63 180 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms