RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TMEM101Q96IK0 257 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 OVOL2Q9BRP0 275 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 GTSF1LQ9H1H1 148 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 CDKN2A-AS1Q9UH64 79 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 RYR1P21817 5038 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 TRBV6-4A0A1B0GX49 114 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE12JA6NER3 117 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 C9JAW5 83 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 H7C2G1 150 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 UBE2L6O14933 153 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 SLC25A20O43772 301 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 PRSS2P07478 247 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 COX6CP09669 75 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 HILS1P60008 231 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 HERV-K104P63124 156 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE4Q13068 117 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE5Q13069 117 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 LINC01620Q4KN68 170 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 ADAMTSL4-AS1Q5T5F5 129 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 LINC00242Q5T6M2 205 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 NTM-AS1Q6ZSK4 140 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 NOP10Q9NPE3 64 aaKnown RBP3.49□□□□□ -1.85
SF3B6-202ENST00000478050 ICOSQ9Y6W8 199 aa3.49□□□□□ -1.85
SF3B6-202ENST00000478050 TENM3Q9P273 2699 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 TRGV2A0A075B6R0 118 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 TRBV10-2A0A0K0K1G8 114 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 PLAC8L1A1L4L8 177 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 TMEM262E9PQX1 116 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE7O76087 117 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 GIG44P09565 113 aaPredicted RBP3.48□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE12FP0CL80 117 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE12GP0CL81 117 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 GAGE12IP0CL82 117 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 LINC00694P0DN24 101 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
SF3B6-202ENST00000478050 INSL3P51460 131 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 COX6A2Q02221 97 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 ANKRD29Q8N6D5 301 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 CSNK1G2-AS1Q8NCQ2 148 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 CARD19Q96LW7 228 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 Q9H8V8 135 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
SF3B6-202ENST00000478050 TRAV13-1A0A0B4J241 112 aa3.47□□□□□ -1.85
SF3B6-202ENST00000478050 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
SF3B6-202ENST00000478050 F5H768 121 aa3.47□□□□□ -1.85
SF3B6-202ENST00000478050 H3BT86 120 aa3.47□□□□□ -1.85
SF3B6-202ENST00000478050 RPL13AP40429 203 aaKnown RBP3.47□□□□□ -1.85
SF3B6-202ENST00000478050 KIR2DL5BQ8NHK3 375 aa3.47□□□□□ -1.85
SF3B6-202ENST00000478050 LINC00308Q8TCZ7 52 aa3.47□□□□□ -1.85
SF3B6-202ENST00000478050 LST1O00453 97 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 NPC2P61916 151 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 MEIG1Q5JSS6 88 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 LINC00612Q8N6U2 182 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 UBE2WQ96B02 151 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
SF3B6-202ENST00000478050 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 WFDC10AQ9H1F0 79 aa3.46□□□□□ -1.86
SF3B6-202ENST00000478050 HYDINQ4G0P3 5121 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 LOC100131303A0A0U1RQF7 123 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 SMIM9A6NGZ8 99 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 GAGE6Q13070 117 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 FAM222AQ5U5X8 452 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 C2orf82Q6UX34 121 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 DAND5Q8N907 189 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
SF3B6-202ENST00000478050 TRAV8-4A0A0B4J246 113 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 A0A1B0GV72 72 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 COX7A2LO14548 114 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 IGKV2-30P06310 120 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 C9orf66Q5T8R8 295 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 SOSTDC1Q6X4U4 206 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 LINC01561Q8N1V8 128 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 CLEC2BQ92478 149 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 CHCHD5Q9BSY4 110 aa3.44□□□□□ -1.86
SF3B6-202ENST00000478050 A0A087WZ39 114 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 TRAV13-2A0A0B4J235 113 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 IGHV3OR16-9A0A0B4J2B5 98 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 LYRM9A8MSI8 78 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 TRACP01848 142 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 CRPP02741 224 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 XGP55808 180 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 KRTAP10-3P60369 221 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 MRPL23Q16540 153 aaKnown RBP3.43□□□□□ -1.86
SF3B6-202ENST00000478050 DEFB121Q5J5C9 76 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
SF3B6-202ENST00000478050 IGLV4-60A0A075B6I1 120 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 TEX49A0A1B0GTD5 131 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 LINC00959A0A1B0GUT2 108 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 A0A1B0GUV1 79 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 FAM240AA0A1B0GVK7 77 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 451.5 ms