RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 SMIM1B2RUZ4 78 aa11.23□□□□□ -0.61
VARS2-207ENST00000476162 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
VARS2-207ENST00000476162 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
VARS2-207ENST00000476162 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
VARS2-207ENST00000476162 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.61
VARS2-207ENST00000476162 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.61
VARS2-207ENST00000476162 Q9H8V8 135 aa11.21□□□□□ -0.61
VARS2-207ENST00000476162 DAND5Q8N907 189 aa11.21□□□□□ -0.62
VARS2-207ENST00000476162 F5H768 121 aa11.2□□□□□ -0.62
VARS2-207ENST00000476162 TIMM17BO60830 172 aa11.2□□□□□ -0.62
VARS2-207ENST00000476162 CXCL5P42830 114 aa11.2□□□□□ -0.62
VARS2-207ENST00000476162 ZNF625Q96I27 306 aaPredicted RBP11.2□□□□□ -0.62
VARS2-207ENST00000476162 IGLV4-60A0A075B6I1 120 aa11.19□□□□□ -0.62
VARS2-207ENST00000476162 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
VARS2-207ENST00000476162 GYPEP15421 78 aa11.17□□□□□ -0.62
VARS2-207ENST00000476162 CIRBPQ14011 172 aaKnown RBP11.17□□□□□ -0.62
VARS2-207ENST00000476162 ATRQ13535 2644 aa11.17□□□□□ -0.62
VARS2-207ENST00000476162 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
VARS2-207ENST00000476162 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
VARS2-207ENST00000476162 DPH3Q96FX2 82 aa11.17□□□□□ -0.62
VARS2-207ENST00000476162 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
VARS2-207ENST00000476162 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
VARS2-207ENST00000476162 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
VARS2-207ENST00000476162 CYSTM1Q9H1C7 97 aa11.16□□□□□ -0.62
VARS2-207ENST00000476162 DEFB4AO15263 64 aa11.15□□□□□ -0.62
VARS2-207ENST00000476162 TRACP01848 142 aa11.15□□□□□ -0.62
VARS2-207ENST00000476162 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
VARS2-207ENST00000476162 ATOX1O00244 68 aa11.14□□□□□ -0.63
VARS2-207ENST00000476162 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
VARS2-207ENST00000476162 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
VARS2-207ENST00000476162 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
VARS2-207ENST00000476162 APOC4P55056 127 aa11.13□□□□□ -0.63
VARS2-207ENST00000476162 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
VARS2-207ENST00000476162 LYRM9A8MSI8 78 aa11.12□□□□□ -0.63
VARS2-207ENST00000476162 OXTP01178 125 aa11.12□□□□□ -0.63
VARS2-207ENST00000476162 TMEM258P61165 79 aa11.12□□□□□ -0.63
VARS2-207ENST00000476162 A0A096LPF7 62 aa11.12□□□□□ -0.63
VARS2-207ENST00000476162 C4orf26Q17RF5 130 aa11.12□□□□□ -0.63
VARS2-207ENST00000476162 IGHV3OR16-9A0A0B4J2B5 98 aa11.11□□□□□ -0.63
VARS2-207ENST00000476162 IGHV4-28A0A0C4DH34 117 aa11.11□□□□□ -0.63
VARS2-207ENST00000476162 PAX4O43316 350 aa11.1□□□□□ -0.63
VARS2-207ENST00000476162 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
VARS2-207ENST00000476162 Q5XG85 94 aa11.09□□□□□ -0.63
VARS2-207ENST00000476162 WFDC9Q8NEX5 89 aa11.09□□□□□ -0.63
VARS2-207ENST00000476162 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
VARS2-207ENST00000476162 TOMM7Q9P0U1 55 aa11.09□□□□□ -0.63
VARS2-207ENST00000476162 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.64
VARS2-207ENST00000476162 UPK3BQ9BT76 320 aa11.08□□□□□ -0.64
VARS2-207ENST00000476162 A0A087WZ39 114 aa11.07□□□□□ -0.64
VARS2-207ENST00000476162 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
VARS2-207ENST00000476162 HRCT1Q6UXD1 115 aa11.07□□□□□ -0.64
VARS2-207ENST00000476162 Q8NAQ8 132 aa11.07□□□□□ -0.64
VARS2-207ENST00000476162 CELA1Q9UNI1 258 aa11.07□□□□□ -0.64
VARS2-207ENST00000476162 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
VARS2-207ENST00000476162 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
VARS2-207ENST00000476162 DAD1P61803 113 aa11.06□□□□□ -0.64
VARS2-207ENST00000476162 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
VARS2-207ENST00000476162 COX7A2LO14548 114 aa11.05□□□□□ -0.64
VARS2-207ENST00000476162 IGHV4-30-4P0DP06 118 aa11.05□□□□□ -0.64
VARS2-207ENST00000476162 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
VARS2-207ENST00000476162 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
VARS2-207ENST00000476162 MIFP14174 115 aa11.04□□□□□ -0.64
VARS2-207ENST00000476162 CLPSL2Q6UWE3 100 aa11.04□□□□□ -0.64
VARS2-207ENST00000476162 XCL1P47992 114 aa11.04□□□□□ -0.64
VARS2-207ENST00000476162 SERP2Q8N6R1 65 aa11.04□□□□□ -0.64
VARS2-207ENST00000476162 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
VARS2-207ENST00000476162 F8P00451 2351 aa11.02□□□□□ -0.64
VARS2-207ENST00000476162 SS18Q15532 418 aa11.02□□□□□ -0.65
VARS2-207ENST00000476162 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
VARS2-207ENST00000476162 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
VARS2-207ENST00000476162 SPART-AS1P0CW21 52 aa11□□□□□ -0.65
VARS2-207ENST00000476162 HTN3P15516 51 aa11□□□□□ -0.65
VARS2-207ENST00000476162 LINC00158P58513 81 aa11□□□□□ -0.65
VARS2-207ENST00000476162 Q8N3U1 123 aa11□□□□□ -0.65
VARS2-207ENST00000476162 LINC00269Q8N2A0 174 aa10.99□□□□□ -0.65
VARS2-207ENST00000476162 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
VARS2-207ENST00000476162 C11orf68Q9H3H3 251 aaKnown RBP10.99□□□□□ -0.65
VARS2-207ENST00000476162 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
VARS2-207ENST00000476162 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
VARS2-207ENST00000476162 PFN2P35080 140 aa10.97□□□□□ -0.65
VARS2-207ENST00000476162 FLNBO75369 2602 aaKnown RBP10.97□□□□□ -0.65
VARS2-207ENST00000476162 ANGP03950 147 aaKnown RBP10.96□□□□□ -0.65
VARS2-207ENST00000476162 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
VARS2-207ENST00000476162 Q6JHZ5 121 aa10.96□□□□□ -0.66
VARS2-207ENST00000476162 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 CCL18P55774 89 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 REG3AQ06141 175 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 LINC01561Q8N1V8 128 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 FAM218AQ96MZ4 157 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 IGKV3D-7A0A0C4DH55 119 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 Q8IZM0 81 aa10.94□□□□□ -0.66
VARS2-207ENST00000476162 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
VARS2-207ENST00000476162 USP17L23D6RBM5 183 aa10.93□□□□□ -0.66
VARS2-207ENST00000476162 MALP21145 153 aa10.93□□□□□ -0.66
VARS2-207ENST00000476162 CD164L2Q6UWJ8 174 aa10.93□□□□□ -0.66
VARS2-207ENST00000476162 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
VARS2-207ENST00000476162 CHCHD10Q8WYQ3 142 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms