RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 LINC01561Q8N1V8 128 aa12.45□□□□□ -0.42
SEC61A2-213ENST00000475268 MALP21145 153 aa12.45□□□□□ -0.42
SEC61A2-213ENST00000475268 Q1RN00 199 aa12.45□□□□□ -0.42
SEC61A2-213ENST00000475268 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
SEC61A2-213ENST00000475268 PRR34Q9NV39 138 aa12.45□□□□□ -0.42
SEC61A2-213ENST00000475268 Q8IZM0 81 aa12.44□□□□□ -0.42
SEC61A2-213ENST00000475268 COPS9Q8WXC6 57 aa12.44□□□□□ -0.42
SEC61A2-213ENST00000475268 FOXI1Q12951 378 aa12.43□□□□□ -0.42
SEC61A2-213ENST00000475268 ENHOQ6UWT2 76 aa12.43□□□□□ -0.42
SEC61A2-213ENST00000475268 PSMB2P49721 201 aa12.43□□□□□ -0.42
SEC61A2-213ENST00000475268 LINC00158P58513 81 aa12.43□□□□□ -0.42
SEC61A2-213ENST00000475268 GAGE12HA6NDE8 117 aa12.42□□□□□ -0.42
SEC61A2-213ENST00000475268 SCGB1C2P0DMR2 95 aa12.42□□□□□ -0.42
SEC61A2-213ENST00000475268 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
SEC61A2-213ENST00000475268 CRPP02741 224 aa12.42□□□□□ -0.42
SEC61A2-213ENST00000475268 LYRM7Q5U5X0 104 aa12.42□□□□□ -0.42
SEC61A2-213ENST00000475268 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
SEC61A2-213ENST00000475268 TRAV10A0A0B4J240 114 aa12.41□□□□□ -0.42
SEC61A2-213ENST00000475268 PFN2P35080 140 aa12.41□□□□□ -0.42
SEC61A2-213ENST00000475268 C2orf82Q6UX34 121 aa12.41□□□□□ -0.42
SEC61A2-213ENST00000475268 IBA57-AS1B1ANH7 110 aa12.4□□□□□ -0.42
SEC61A2-213ENST00000475268 CKS1BP61024 79 aa12.4□□□□□ -0.42
SEC61A2-213ENST00000475268 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
SEC61A2-213ENST00000475268 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
SEC61A2-213ENST00000475268 KIAA0087Q14695 138 aa12.38□□□□□ -0.43
SEC61A2-213ENST00000475268 TCL1BO95988 128 aa12.37□□□□□ -0.43
SEC61A2-213ENST00000475268 MTURNQ8N3F0 131 aa12.37□□□□□ -0.43
SEC61A2-213ENST00000475268 HUWE1Q7Z6Z7 4374 aaKnown RBP12.36□□□□□ -0.43
SEC61A2-213ENST00000475268 TRAV8-4A0A0B4J246 113 aa12.36□□□□□ -0.43
SEC61A2-213ENST00000475268 F8W1H4 67 aa12.36□□□□□ -0.43
SEC61A2-213ENST00000475268 TRBV20-1A0A075B6N2 111 aa12.35□□□□□ -0.43
SEC61A2-213ENST00000475268 TRIAP1O43715 76 aa12.35□□□□□ -0.43
SEC61A2-213ENST00000475268 PPDPFQ9H3Y8 114 aa12.35□□□□□ -0.43
SEC61A2-213ENST00000475268 CXCL5P42830 114 aa12.35□□□□□ -0.43
SEC61A2-213ENST00000475268 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
SEC61A2-213ENST00000475268 WFDC2Q14508 124 aa12.34□□□□□ -0.43
SEC61A2-213ENST00000475268 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
SEC61A2-213ENST00000475268 KLK5Q9Y337 293 aaPredicted RBP12.34□□□□□ -0.43
SEC61A2-213ENST00000475268 SND1-IT1Q9HBX3 110 aa12.33□□□□□ -0.44
SEC61A2-213ENST00000475268 CCL18P55774 89 aa12.33□□□□□ -0.44
SEC61A2-213ENST00000475268 SPAG11BQ08648 103 aa12.33□□□□□ -0.44
SEC61A2-213ENST00000475268 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
SEC61A2-213ENST00000475268 LINC01556Q5JQF7 62 aa12.32□□□□□ -0.44
SEC61A2-213ENST00000475268 OCIAD2Q56VL3 154 aa12.32□□□□□ -0.44
SEC61A2-213ENST00000475268 C6orf223Q8N319 242 aa12.32□□□□□ -0.44
SEC61A2-213ENST00000475268 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
SEC61A2-213ENST00000475268 C9orf116Q5BN46 136 aaPredicted RBP12.3□□□□□ -0.44
SEC61A2-213ENST00000475268 COX6CP09669 75 aa12.29□□□□□ -0.44
SEC61A2-213ENST00000475268 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
SEC61A2-213ENST00000475268 UNQ6190/PRO20217Q6UXQ8 127 aa12.28□□□□□ -0.44
SEC61A2-213ENST00000475268 IGKV2-28A0A075B6P5 120 aa12.28□□□□□ -0.44
SEC61A2-213ENST00000475268 IGKV2D-28P01615 120 aa12.28□□□□□ -0.44
SEC61A2-213ENST00000475268 COX17Q14061 63 aa12.28□□□□□ -0.44
SEC61A2-213ENST00000475268 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
SEC61A2-213ENST00000475268 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
SEC61A2-213ENST00000475268 ATXN8Q156A1 80 aa12.27□□□□□ -0.45
SEC61A2-213ENST00000475268 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.45
SEC61A2-213ENST00000475268 TRAV13-2A0A0B4J235 113 aa12.26□□□□□ -0.45
SEC61A2-213ENST00000475268 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
SEC61A2-213ENST00000475268 SMCPP49901 116 aaPredicted RBP12.26□□□□□ -0.45
SEC61A2-213ENST00000475268 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
SEC61A2-213ENST00000475268 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
SEC61A2-213ENST00000475268 COL7A1Q02388 2944 aa12.25□□□□□ -0.45
SEC61A2-213ENST00000475268 ETDBQ3ZM63 59 aa12.25□□□□□ -0.45
SEC61A2-213ENST00000475268 CLEC2BQ92478 149 aa12.25□□□□□ -0.45
SEC61A2-213ENST00000475268 IGKV2D-24A0A075B6R9 120 aa12.24□□□□□ -0.45
SEC61A2-213ENST00000475268 K7ERU9 68 aa12.24□□□□□ -0.45
SEC61A2-213ENST00000475268 Q9HAA7 133 aa12.23□□□□□ -0.45
SEC61A2-213ENST00000475268 C9JAW5 83 aa12.23□□□□□ -0.45
SEC61A2-213ENST00000475268 HIGD2BQ4VC39 106 aa12.23□□□□□ -0.45
SEC61A2-213ENST00000475268 NTN5Q8WTR8 489 aaPredicted RBP12.23□□□□□ -0.45
SEC61A2-213ENST00000475268 STAB2Q8WWQ8 2551 aa12.22□□□□□ -0.45
SEC61A2-213ENST00000475268 ZNF561-AS1K7EIQ3 104 aa12.22□□□□□ -0.45
SEC61A2-213ENST00000475268 LINC01620Q4KN68 170 aa12.21□□□□□ -0.45
SEC61A2-213ENST00000475268 RNF151Q2KHN1 245 aa12.2□□□□□ -0.46
SEC61A2-213ENST00000475268 DNAH9Q9NYC9 4486 aa12.19□□□□□ -0.46
SEC61A2-213ENST00000475268 SLC25A20O43772 301 aa12.19□□□□□ -0.46
SEC61A2-213ENST00000475268 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
SEC61A2-213ENST00000475268 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
SEC61A2-213ENST00000475268 C6orf48Q9UBA6 75 aa12.19□□□□□ -0.46
SEC61A2-213ENST00000475268 LST1O00453 97 aa12.18□□□□□ -0.46
SEC61A2-213ENST00000475268 PRR3P79522 188 aaKnown RBP12.18□□□□□ -0.46
SEC61A2-213ENST00000475268 CAMK2N2Q96S95 79 aa12.18□□□□□ -0.46
SEC61A2-213ENST00000475268 RPL28P46779 137 aaKnown RBP12.18□□□□□ -0.46
SEC61A2-213ENST00000475268 GVQW2A0A096LPI5 108 aaPredicted RBP12.17□□□□□ -0.46
SEC61A2-213ENST00000475268 SMIM11BQ8TCY0 68 aa12.16□□□□□ -0.46
SEC61A2-213ENST00000475268 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
SEC61A2-213ENST00000475268 NDUFC2O95298 119 aa12.15□□□□□ -0.47
SEC61A2-213ENST00000475268 MUC7Q8TAX7 377 aa12.15□□□□□ -0.47
SEC61A2-213ENST00000475268 TRBV10-2A0A0K0K1G8 114 aa12.14□□□□□ -0.47
SEC61A2-213ENST00000475268 TEN1Q86WV5 123 aa12.13□□□□□ -0.47
SEC61A2-213ENST00000475268 ANKRD29Q8N6D5 301 aa12.13□□□□□ -0.47
SEC61A2-213ENST00000475268 Q6ZRU5 148 aa12.13□□□□□ -0.47
SEC61A2-213ENST00000475268 Q8NDZ9 215 aa12.13□□□□□ -0.47
SEC61A2-213ENST00000475268 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
SEC61A2-213ENST00000475268 NHLRC4P0CG21 123 aaPredicted RBP12.11□□□□□ -0.47
SEC61A2-213ENST00000475268 VPS25Q9BRG1 176 aa12.11□□□□□ -0.47
SEC61A2-213ENST00000475268 M0QXV9 152 aa12.11□□□□□ -0.47
SEC61A2-213ENST00000475268 NCR3O14931 201 aa12.11□□□□□ -0.47
SEC61A2-213ENST00000475268 FAM218AQ96MZ4 157 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms