RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 CDKN2A-AS1Q9UH64 79 aa12.7□□□□□ -0.38
EPHB3-202ENST00000473079 CKS1BP61024 79 aa12.69□□□□□ -0.38
EPHB3-202ENST00000473079 SCGB3A1Q96QR1 104 aa12.69□□□□□ -0.38
EPHB3-202ENST00000473079 GEMIN7Q9H840 131 aaKnown RBP12.69□□□□□ -0.38
EPHB3-202ENST00000473079 IGLV7-43P04211 117 aa12.68□□□□□ -0.38
EPHB3-202ENST00000473079 C9orf129Q5T035 196 aaKnown RBP12.68□□□□□ -0.38
EPHB3-202ENST00000473079 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
EPHB3-202ENST00000473079 TOMM7Q9P0U1 55 aa12.68□□□□□ -0.38
EPHB3-202ENST00000473079 COMMD7Q86VX2 200 aa12.67□□□□□ -0.38
EPHB3-202ENST00000473079 M0QXV9 152 aa12.65□□□□□ -0.38
EPHB3-202ENST00000473079 RHEBQ15382 184 aa12.65□□□□□ -0.38
EPHB3-202ENST00000473079 DIRC1Q969H9 104 aa12.65□□□□□ -0.38
EPHB3-202ENST00000473079 CARHSP1Q9Y2V2 147 aaKnown RBP12.65□□□□□ -0.38
EPHB3-202ENST00000473079 UBR4Q5T4S7 5183 aa12.64□□□□□ -0.39
EPHB3-202ENST00000473079 TINCRA0A1B0GVN0 87 aa12.64□□□□□ -0.39
EPHB3-202ENST00000473079 F8VRH5 84 aa12.64□□□□□ -0.39
EPHB3-202ENST00000473079 ODF1Q14990 250 aa12.64□□□□□ -0.39
EPHB3-202ENST00000473079 IGLV5-45A0A087WSX0 123 aa12.63□□□□□ -0.39
EPHB3-202ENST00000473079 CXCL5P42830 114 aa12.63□□□□□ -0.39
EPHB3-202ENST00000473079 MRPL18Q9H0U6 180 aaKnown RBP12.63□□□□□ -0.39
EPHB3-202ENST00000473079 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
EPHB3-202ENST00000473079 LINC00469Q8N7U9 141 aa12.62□□□□□ -0.39
EPHB3-202ENST00000473079 CST9LQ9H4G1 147 aa12.62□□□□□ -0.39
EPHB3-202ENST00000473079 SMIM1B2RUZ4 78 aa12.61□□□□□ -0.39
EPHB3-202ENST00000473079 UBE2BP63146 152 aa12.61□□□□□ -0.39
EPHB3-202ENST00000473079 PDZD11Q5EBL8 140 aa12.61□□□□□ -0.39
EPHB3-202ENST00000473079 RPS10P5Q9NQ39 176 aa12.61□□□□□ -0.39
EPHB3-202ENST00000473079 H0Y9J4 135 aa12.6□□□□□ -0.39
EPHB3-202ENST00000473079 FA2HQ7L5A8 372 aa12.6□□□□□ -0.39
EPHB3-202ENST00000473079 PMVKQ15126 192 aa12.59□□□□□ -0.39
EPHB3-202ENST00000473079 SMCO4Q9NRQ5 59 aa12.59□□□□□ -0.39
EPHB3-202ENST00000473079 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
EPHB3-202ENST00000473079 XAGE1AQ9HD64 81 aa12.57□□□□□ -0.4
EPHB3-202ENST00000473079 C22orf24Q9Y442 160 aa12.57□□□□□ -0.4
EPHB3-202ENST00000473079 LBHQ53QV2 105 aaPredicted RBP12.56□□□□□ -0.4
EPHB3-202ENST00000473079 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
EPHB3-202ENST00000473079 A0A096LNJ9 63 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 NUPR1O60356 82 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 SPINK8P0C7L1 97 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 LINC00614P0C842 121 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 C18orf32Q8TCD1 76 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 URB1-AS1Q96HZ7 61 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 TRAPPC1Q9Y5R8 145 aa12.52□□□□□ -0.41
EPHB3-202ENST00000473079 H3BRM9 83 aa12.51□□□□□ -0.41
EPHB3-202ENST00000473079 KRTAP1-4P0C5Y4 121 aa12.51□□□□□ -0.41
EPHB3-202ENST00000473079 LRP2P98164 4655 aa12.51□□□□□ -0.41
EPHB3-202ENST00000473079 IGLV1-50A0A075B6I6 118 aa12.5□□□□□ -0.41
EPHB3-202ENST00000473079 ZNF861PO60384 105 aa12.5□□□□□ -0.41
EPHB3-202ENST00000473079 IGLC3P0DOY3 106 aa12.5□□□□□ -0.41
EPHB3-202ENST00000473079 MRPL55Q7Z7F7 128 aaKnown RBP12.49□□□□□ -0.41
EPHB3-202ENST00000473079 SNAPINO95295 136 aa12.48□□□□□ -0.41
EPHB3-202ENST00000473079 HBDP02042 147 aa12.48□□□□□ -0.41
EPHB3-202ENST00000473079 APOC3P02656 99 aa12.48□□□□□ -0.41
EPHB3-202ENST00000473079 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
EPHB3-202ENST00000473079 SVBPQ8N300 66 aa12.47□□□□□ -0.41
EPHB3-202ENST00000473079 RAB5BP61020 215 aa12.46□□□□□ -0.41
EPHB3-202ENST00000473079 IGLV5-37A0A075B6J1 123 aa12.45□□□□□ -0.42
EPHB3-202ENST00000473079 ATP5LO75964 103 aa12.45□□□□□ -0.42
EPHB3-202ENST00000473079 NDUFA6P56556 154 aa12.45□□□□□ -0.42
EPHB3-202ENST00000473079 NDUFA5Q16718 116 aa12.45□□□□□ -0.42
EPHB3-202ENST00000473079 ZNF22P17026 224 aaPredicted RBP12.44□□□□□ -0.42
EPHB3-202ENST00000473079 LINC00167Q96N53 147 aa12.44□□□□□ -0.42
EPHB3-202ENST00000473079 RPL13AP40429 203 aaKnown RBP12.43□□□□□ -0.42
EPHB3-202ENST00000473079 BCE1O60756 84 aa12.42□□□□□ -0.42
EPHB3-202ENST00000473079 PMCHL1Q16048 86 aa12.42□□□□□ -0.42
EPHB3-202ENST00000473079 RPL28P46779 137 aaKnown RBP12.4□□□□□ -0.42
EPHB3-202ENST00000473079 BAGE3Q86Y29 109 aa12.4□□□□□ -0.42
EPHB3-202ENST00000473079 YPEL4Q96NS1 127 aa12.4□□□□□ -0.42
EPHB3-202ENST00000473079 RPL37AP8A6NKH3 93 aa12.39□□□□□ -0.43
EPHB3-202ENST00000473079 COX17Q14061 63 aa12.39□□□□□ -0.43
EPHB3-202ENST00000473079 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
EPHB3-202ENST00000473079 SFTA2Q6UW10 78 aa12.38□□□□□ -0.43
EPHB3-202ENST00000473079 NKAPP1Q8N9T2 125 aa12.38□□□□□ -0.43
EPHB3-202ENST00000473079 PFN2P35080 140 aa12.37□□□□□ -0.43
EPHB3-202ENST00000473079 ERG28Q9UKR5 140 aa12.37□□□□□ -0.43
EPHB3-202ENST00000473079 GAGE10A6NGK3 116 aa12.36□□□□□ -0.43
EPHB3-202ENST00000473079 CHCHD1Q96BP2 118 aaKnown RBP12.36□□□□□ -0.43
EPHB3-202ENST00000473079 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
EPHB3-202ENST00000473079 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
EPHB3-202ENST00000473079 CHTOPQ9Y3Y2 248 aaKnown RBP12.34□□□□□ -0.43
EPHB3-202ENST00000473079 TRAV12-1A0A0B4J245 112 aa12.33□□□□□ -0.44
EPHB3-202ENST00000473079 KRTAP13-1Q8IUC0 172 aa12.33□□□□□ -0.44
EPHB3-202ENST00000473079 VPREB1P12018 145 aa12.32□□□□□ -0.44
EPHB3-202ENST00000473079 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
EPHB3-202ENST00000473079 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
EPHB3-202ENST00000473079 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
EPHB3-202ENST00000473079 IGKV2-28A0A075B6P5 120 aa12.29□□□□□ -0.44
EPHB3-202ENST00000473079 SCO1O75880 301 aa12.29□□□□□ -0.44
EPHB3-202ENST00000473079 IGKV2D-28P01615 120 aa12.29□□□□□ -0.44
EPHB3-202ENST00000473079 TMEM223A0PJW6 202 aa12.28□□□□□ -0.44
EPHB3-202ENST00000473079 UBE2AP49459 152 aa12.28□□□□□ -0.44
EPHB3-202ENST00000473079 RNF213Q63HN8 5207 aa12.28□□□□□ -0.44
EPHB3-202ENST00000473079 A0A087X002 238 aa12.27□□□□□ -0.45
EPHB3-202ENST00000473079 CRYGAP11844 174 aa12.27□□□□□ -0.45
EPHB3-202ENST00000473079 Q8NDZ9 215 aa12.25□□□□□ -0.45
EPHB3-202ENST00000473079 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
EPHB3-202ENST00000473079 HSBP1O75506 76 aa12.24□□□□□ -0.45
EPHB3-202ENST00000473079 CBLN2Q8IUK8 224 aa12.24□□□□□ -0.45
EPHB3-202ENST00000473079 LINC00158P58513 81 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms