RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 MUC3AQ02505 3323 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 TRBV6-5A0A0K0K1A5 114 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 M0R135 149 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 M0R2N4 97 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 IFI27P40305 119 aaPredicted RBP1.94□□□□□ -2.1
COL11A1-208ENST00000470170 SPINT3P49223 89 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 CCL18P55774 89 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 RPL37AP61513 92 aaKnown RBP1.94□□□□□ -2.1
COL11A1-208ENST00000470170 Q6JHZ5 121 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 COA5Q86WW8 74 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 BAGE2Q86Y30 109 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 RGPD2P0DJD1 1756 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 NCOR2Q9Y618 2525 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 PAPPAQ13219 1627 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 C2CD3Q4AC94 2353 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 MRC1P22897 1456 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 ATP7BP35670 1465 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 FBN3Q75N90 2809 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 AFDNP55196 1824 aaKnown RBP1.94□□□□□ -2.1
COL11A1-208ENST00000470170 MKI67P46013 3256 aaKnown RBP1.93□□□□□ -2.1
COL11A1-208ENST00000470170 RANBP2P49792 3224 aaKnown RBP1.93□□□□□ -2.1
COL11A1-208ENST00000470170 LMTK2Q8IWU2 1503 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 ZFHX2Q9C0A1 2572 aaPredicted RBP1.93□□□□□ -2.1
COL11A1-208ENST00000470170 EXPH5Q8NEV8 1989 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 LOC110117498A0A087WWA1 95 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 CTXND1A0A1B0GTU2 59 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 C10orf142B7Z368 130 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 MGPP08493 103 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 FXYD3Q14802 87 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 BAGE3Q86Y29 109 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 ZNF563Q8TA94 476 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 ITPR3Q14573 2671 aa1.93□□□□□ -2.1
COL11A1-208ENST00000470170 COL14A1Q05707 1796 aaKnown RBP1.93□□□□□ -2.1
COL11A1-208ENST00000470170 EYSQ5T1H1 3165 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 NRAPQ86VF7 1730 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 CFAP47Q6ZTR5 3102 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 FXYD4P59646 89 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 NUMA1Q14980 2115 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 GNG13Q9P2W3 67 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 ABCA2Q9BZC7 2435 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 PRXQ9BXM0 1461 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 MYO9AB2RTY4 2548 aa1.92□□□□□ -2.1
COL11A1-208ENST00000470170 SIP14410 1827 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 MAP1BP46821 2468 aaKnown RBP1.91□□□□□ -2.1
COL11A1-208ENST00000470170 RP1P56715 2156 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 MPDZO75970 2070 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 DLEC1Q9Y238 1755 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 NBDYA0A0U1RRE5 68 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
COL11A1-208ENST00000470170 H3BVH4 76 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 M0R3E3 92 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 C3orf79P0CE67 100 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 IL9P15248 144 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 SMIM4Q8WVI0 70 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 WFDC6Q9BQY6 131 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 LINC00846Q9NV44 126 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 UBE2D4Q9Y2X8 147 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 HEATR1Q9H583 2144 aaKnown RBP1.91□□□□□ -2.1
COL11A1-208ENST00000470170 QSER1Q2KHR3 1735 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 FMN2Q9NZ56 1722 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 CLTCL1P53675 1640 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 PHRF1Q9P1Y6 1649 aaKnown RBP1.91□□□□□ -2.1
COL11A1-208ENST00000470170 MED13Q9UHV7 2174 aa1.91□□□□□ -2.1
COL11A1-208ENST00000470170 PAPPA2Q9BXP8 1791 aa1.9□□□□□ -2.1
COL11A1-208ENST00000470170 CENPFP49454 3210 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 DLG5Q8TDM6 1919 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 CEP192Q8TEP8 1941 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 COX17Q14061 63 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 HCP5Q6MZN7 132 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 C5orf56Q8N8D9 126 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 KDM3BQ7LBC6 1761 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 SPTAN1Q13813 2472 aaKnown RBP1.9□□□□□ -2.11
COL11A1-208ENST00000470170 CTTNBP2Q8WZ74 1663 aa1.9□□□□□ -2.11
COL11A1-208ENST00000470170 BRCA2P51587 3418 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 COL4A2P08572 1712 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 GDF5OSQ5U4N7 250 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 ZNF625Q96I27 306 aaPredicted RBP1.89□□□□□ -2.11
COL11A1-208ENST00000470170 LINC00208Q96KT6 92 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 HILPDAQ9Y5L2 63 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 HECTD1Q9ULT8 2610 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 LAMA3Q16787 3333 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 BTAF1O14981 1849 aa1.89□□□□□ -2.11
COL11A1-208ENST00000470170 FAM186AA6NE01 2351 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 PDCD11Q14690 1871 aaKnown RBP1.88□□□□□ -2.11
COL11A1-208ENST00000470170 CFAP54Q96N23 3096 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 RIF1Q5UIP0 2472 aaKnown RBP1.88□□□□□ -2.11
COL11A1-208ENST00000470170 A0A0D9SFI3 127 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 A0A1B0GUT8 65 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 J3QKU1 62 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 ZNF137PP52743 207 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 ATXN8Q156A1 80 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 PROK2Q9HC23 129 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 USP24Q9UPU5 2620 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 PARP4Q9UKK3 1724 aaKnown RBP1.88□□□□□ -2.11
COL11A1-208ENST00000470170 SPTA1P02549 2419 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 GBF1Q92538 1859 aa1.88□□□□□ -2.11
COL11A1-208ENST00000470170 RP1L1Q8IWN7 2480 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms