RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
CCDC78-207ENST00000466708 PRO0461Q9UI25 63 aa13.97□□□□□ -0.17
CCDC78-207ENST00000466708 IGLV10-54A0A075B6I4 117 aa13.96□□□□□ -0.17
CCDC78-207ENST00000466708 K7ERU9 68 aa13.96□□□□□ -0.17
CCDC78-207ENST00000466708 MIR7-3HGQ8N6C7 128 aa13.96□□□□□ -0.17
CCDC78-207ENST00000466708 TM2D3Q9BRN9 247 aa13.96□□□□□ -0.17
CCDC78-207ENST00000466708 K7EIL1 84 aa13.95□□□□□ -0.18
CCDC78-207ENST00000466708 MALP21145 153 aa13.95□□□□□ -0.18
CCDC78-207ENST00000466708 LINC00158P58513 81 aa13.95□□□□□ -0.18
CCDC78-207ENST00000466708 KLK12Q9UKR0 248 aa13.95□□□□□ -0.18
CCDC78-207ENST00000466708 CXCL5P42830 114 aa13.94□□□□□ -0.18
CCDC78-207ENST00000466708 FOXI1Q12951 378 aa13.94□□□□□ -0.18
CCDC78-207ENST00000466708 ANK2Q01484 3957 aa13.94□□□□□ -0.18
CCDC78-207ENST00000466708 RPL13AP40429 203 aaKnown RBP13.94□□□□□ -0.18
CCDC78-207ENST00000466708 WFDC2Q14508 124 aa13.94□□□□□ -0.18
CCDC78-207ENST00000466708 PRB2P02812 416 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-207ENST00000466708 COX6CP09669 75 aa13.93□□□□□ -0.18
CCDC78-207ENST00000466708 TRAV8-4A0A0B4J246 113 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 TRIAP1O43715 76 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 CKS1BP61024 79 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 KIAA0087Q14695 138 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 CFAP161Q6P656 301 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 DEFB121Q5J5C9 76 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 ENHOQ6UWT2 76 aa13.92□□□□□ -0.18
CCDC78-207ENST00000466708 NOTCH1P46531 2555 aa13.91□□□□□ -0.18
CCDC78-207ENST00000466708 GAGE12HA6NDE8 117 aa13.9□□□□□ -0.18
CCDC78-207ENST00000466708 CRPP02741 224 aa13.9□□□□□ -0.18
CCDC78-207ENST00000466708 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-207ENST00000466708 ESRGQ1W209 222 aa13.9□□□□□ -0.18
CCDC78-207ENST00000466708 WFDC10BQ8IUB3 73 aa13.9□□□□□ -0.18
CCDC78-207ENST00000466708 TENM3Q9P273 2699 aa13.9□□□□□ -0.18
CCDC78-207ENST00000466708 PFN2P35080 140 aa13.89□□□□□ -0.19
CCDC78-207ENST00000466708 ATXN8Q156A1 80 aa13.89□□□□□ -0.19
CCDC78-207ENST00000466708 TRAV10A0A0B4J240 114 aa13.88□□□□□ -0.19
CCDC78-207ENST00000466708 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
CCDC78-207ENST00000466708 COX17Q14061 63 aa13.87□□□□□ -0.19
CCDC78-207ENST00000466708 C2orf82Q6UX34 121 aa13.87□□□□□ -0.19
CCDC78-207ENST00000466708 MTURNQ8N3F0 131 aa13.87□□□□□ -0.19
CCDC78-207ENST00000466708 SND1-IT1Q9HBX3 110 aa13.87□□□□□ -0.19
CCDC78-207ENST00000466708 UBE2WQ96B02 151 aa13.87□□□□□ -0.19
CCDC78-207ENST00000466708 CCL18P55774 89 aa13.86□□□□□ -0.19
CCDC78-207ENST00000466708 MRAPQ8TCY5 172 aa13.86□□□□□ -0.19
CCDC78-207ENST00000466708 NBEAL1Q6ZS30 2694 aa13.86□□□□□ -0.19
CCDC78-207ENST00000466708 SMCPP49901 116 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-207ENST00000466708 ETDBQ3ZM63 59 aa13.85□□□□□ -0.19
CCDC78-207ENST00000466708 C15orf53Q8NAA6 179 aa13.85□□□□□ -0.19
CCDC78-207ENST00000466708 MDFIQ99750 246 aa13.83□□□□□ -0.2
CCDC78-207ENST00000466708 M0QXV9 152 aa13.83□□□□□ -0.2
CCDC78-207ENST00000466708 LINC01556Q5JQF7 62 aa13.83□□□□□ -0.2
CCDC78-207ENST00000466708 SPAG11BQ08648 103 aa13.82□□□□□ -0.2
CCDC78-207ENST00000466708 LINC01620Q4KN68 170 aa13.82□□□□□ -0.2
CCDC78-207ENST00000466708 IGKV2-28A0A075B6P5 120 aa13.8□□□□□ -0.2
CCDC78-207ENST00000466708 C9JAW5 83 aa13.8□□□□□ -0.2
CCDC78-207ENST00000466708 IGKV2D-28P01615 120 aa13.8□□□□□ -0.2
CCDC78-207ENST00000466708 MUC7Q8TAX7 377 aa13.8□□□□□ -0.2
CCDC78-207ENST00000466708 J3QR89 54 aa13.8□□□□□ -0.2
CCDC78-207ENST00000466708 SLC25A20O43772 301 aa13.8□□□□□ -0.2
CCDC78-207ENST00000466708 LST1O00453 97 aa13.79□□□□□ -0.2
CCDC78-207ENST00000466708 RNF151Q2KHN1 245 aa13.79□□□□□ -0.2
CCDC78-207ENST00000466708 LINC00337Q8N6G1 96 aa13.79□□□□□ -0.2
CCDC78-207ENST00000466708 LINC01600Q96MT4 127 aa13.78□□□□□ -0.2
CCDC78-207ENST00000466708 TEN1Q86WV5 123 aa13.77□□□□□ -0.21
CCDC78-207ENST00000466708 CLEC2BQ92478 149 aa13.77□□□□□ -0.21
CCDC78-207ENST00000466708 DNAH10OSP0CZ25 163 aa13.76□□□□□ -0.21
CCDC78-207ENST00000466708 RPL28P46779 137 aaKnown RBP13.76□□□□□ -0.21
CCDC78-207ENST00000466708 KRTAP26-1Q6PEX3 210 aa13.76□□□□□ -0.21
CCDC78-207ENST00000466708 MGAM2Q2M2H8 2515 aa13.76□□□□□ -0.21
CCDC78-207ENST00000466708 TRBV10-2A0A0K0K1G8 114 aa13.76□□□□□ -0.21
CCDC78-207ENST00000466708 C6orf223Q8N319 242 aa13.75□□□□□ -0.21
CCDC78-207ENST00000466708 VPS25Q9BRG1 176 aa13.75□□□□□ -0.21
CCDC78-207ENST00000466708 GVQW2A0A096LPI5 108 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-207ENST00000466708 NDUFC2O95298 119 aa13.74□□□□□ -0.21
CCDC78-207ENST00000466708 UNQ6190/PRO20217Q6UXQ8 127 aa13.74□□□□□ -0.21
CCDC78-207ENST00000466708 ANKRD29Q8N6D5 301 aa13.74□□□□□ -0.21
CCDC78-207ENST00000466708 NTN5Q8WTR8 489 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-207ENST00000466708 C1orf43Q9BWL3 253 aa13.74□□□□□ -0.21
CCDC78-207ENST00000466708 CBY1Q9Y3M2 126 aa13.74□□□□□ -0.21
CCDC78-207ENST00000466708 C9orf116Q5BN46 136 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-207ENST00000466708 C10orf25Q5T742 122 aa13.72□□□□□ -0.21
CCDC78-207ENST00000466708 PPDPFLQ8WWR9 84 aa13.71□□□□□ -0.21
CCDC78-207ENST00000466708 H3BT86 120 aa13.71□□□□□ -0.22
CCDC78-207ENST00000466708 ZNF561-AS1K7EIQ3 104 aa13.7□□□□□ -0.22
CCDC78-207ENST00000466708 LINC00526Q96FQ7 95 aa13.7□□□□□ -0.22
CCDC78-207ENST00000466708 LINC00588Q9Y4M8 146 aa13.7□□□□□ -0.22
CCDC78-207ENST00000466708 SMIM11BQ8TCY0 68 aa13.69□□□□□ -0.22
CCDC78-207ENST00000466708 OR13C6PQ8NH95 151 aa13.69□□□□□ -0.22
CCDC78-207ENST00000466708 TRACP01848 142 aa13.68□□□□□ -0.22
CCDC78-207ENST00000466708 HUWE1Q7Z6Z7 4374 aaKnown RBP13.67□□□□□ -0.22
CCDC78-207ENST00000466708 IGKV2D-24A0A075B6R9 120 aa13.67□□□□□ -0.22
CCDC78-207ENST00000466708 F8WDY8 70 aa13.67□□□□□ -0.22
CCDC78-207ENST00000466708 H0YGX0 51 aa13.67□□□□□ -0.22
CCDC78-207ENST00000466708 C2orf48Q96LS8 159 aa13.67□□□□□ -0.22
CCDC78-207ENST00000466708 CARD19Q96LW7 228 aa13.67□□□□□ -0.22
CCDC78-207ENST00000466708 B9D2Q9BPU9 175 aa13.67□□□□□ -0.22
CCDC78-207ENST00000466708 C6orf48Q9UBA6 75 aa13.66□□□□□ -0.22
CCDC78-207ENST00000466708 C15orf56Q8N910 161 aa13.65□□□□□ -0.22
CCDC78-207ENST00000466708 CAMK2N2Q96S95 79 aa13.65□□□□□ -0.22
CCDC78-207ENST00000466708 UPK3BQ9BT76 320 aa13.64□□□□□ -0.23
CCDC78-207ENST00000466708 HIGD2BQ4VC39 106 aa13.64□□□□□ -0.23
CCDC78-207ENST00000466708 TMEM126AQ9H061 195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms