RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 C11orf68Q9H3H3 251 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-203ENST00000464525 RPL13AP40429 203 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-203ENST00000464525 C5orf47Q569G3 176 aa13.55□□□□□ -0.24
POLR2J3-203ENST00000464525 ICOSQ9Y6W8 199 aa13.55□□□□□ -0.24
POLR2J3-203ENST00000464525 TRBV30A0A0K0K1B3 111 aa13.54□□□□□ -0.24
POLR2J3-203ENST00000464525 IGLV10-54A0A075B6I4 117 aa13.53□□□□□ -0.24
POLR2J3-203ENST00000464525 SS18Q15532 418 aa13.53□□□□□ -0.24
POLR2J3-203ENST00000464525 SMIM20Q8N5G0 67 aa13.53□□□□□ -0.24
POLR2J3-203ENST00000464525 C9JAW5 83 aa13.52□□□□□ -0.24
POLR2J3-203ENST00000464525 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-203ENST00000464525 MIR7-3HGQ8N6C7 128 aa13.52□□□□□ -0.25
POLR2J3-203ENST00000464525 F8WDY8 70 aa13.51□□□□□ -0.25
POLR2J3-203ENST00000464525 CLEC2BQ92478 149 aa13.51□□□□□ -0.25
POLR2J3-203ENST00000464525 PFN2P35080 140 aa13.5□□□□□ -0.25
POLR2J3-203ENST00000464525 LINC00158P58513 81 aa13.5□□□□□ -0.25
POLR2J3-203ENST00000464525 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-203ENST00000464525 SIGMAR1Q99720 223 aa13.5□□□□□ -0.25
POLR2J3-203ENST00000464525 K7EIL1 84 aa13.49□□□□□ -0.25
POLR2J3-203ENST00000464525 C6orf226Q5I0X4 101 aa13.49□□□□□ -0.25
POLR2J3-203ENST00000464525 DEFB121Q5J5C9 76 aa13.49□□□□□ -0.25
POLR2J3-203ENST00000464525 C2orf82Q6UX34 121 aa13.49□□□□□ -0.25
POLR2J3-203ENST00000464525 SLC25A20O43772 301 aa13.48□□□□□ -0.25
POLR2J3-203ENST00000464525 MRAPQ8TCY5 172 aa13.48□□□□□ -0.25
POLR2J3-203ENST00000464525 REG3AQ06141 175 aa13.48□□□□□ -0.25
POLR2J3-203ENST00000464525 ATXN8Q156A1 80 aa13.48□□□□□ -0.25
POLR2J3-203ENST00000464525 FOXI1Q12951 378 aa13.47□□□□□ -0.25
POLR2J3-203ENST00000464525 LINC01620Q4KN68 170 aa13.47□□□□□ -0.25
POLR2J3-203ENST00000464525 CHCHD10Q8WYQ3 142 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-203ENST00000464525 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
POLR2J3-203ENST00000464525 ANKRD29Q8N6D5 301 aa13.46□□□□□ -0.26
POLR2J3-203ENST00000464525 TEN1Q86WV5 123 aa13.45□□□□□ -0.26
POLR2J3-203ENST00000464525 COX6CP09669 75 aa13.44□□□□□ -0.26
POLR2J3-203ENST00000464525 COPS9Q8WXC6 57 aa13.44□□□□□ -0.26
POLR2J3-203ENST00000464525 LELP1Q5T871 98 aa13.43□□□□□ -0.26
POLR2J3-203ENST00000464525 CD164L2Q6UWJ8 174 aa13.43□□□□□ -0.26
POLR2J3-203ENST00000464525 Q6ZTC4 211 aa13.43□□□□□ -0.26
POLR2J3-203ENST00000464525 J3QR89 54 aa13.42□□□□□ -0.26
POLR2J3-203ENST00000464525 CCL18P55774 89 aa13.42□□□□□ -0.26
POLR2J3-203ENST00000464525 SND1-IT1Q9HBX3 110 aa13.42□□□□□ -0.26
POLR2J3-203ENST00000464525 IGKV2-28A0A075B6P5 120 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 IGKV2D-28P01615 120 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 A0A0J9YWU9 116 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 COX7A2LO14548 114 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 LYPD5Q6UWN5 251 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 LINC00337Q8N6G1 96 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
POLR2J3-203ENST00000464525 KPRPQ5T749 579 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-203ENST00000464525 Q8IZM0 81 aa13.4□□□□□ -0.26
POLR2J3-203ENST00000464525 KIAA0087Q14695 138 aa13.39□□□□□ -0.27
POLR2J3-203ENST00000464525 LST1O00453 97 aa13.39□□□□□ -0.27
POLR2J3-203ENST00000464525 PPDPFLQ8WWR9 84 aa13.38□□□□□ -0.27
POLR2J3-203ENST00000464525 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
POLR2J3-203ENST00000464525 MALP21145 153 aa13.38□□□□□ -0.27
POLR2J3-203ENST00000464525 LINC00526Q96FQ7 95 aa13.37□□□□□ -0.27
POLR2J3-203ENST00000464525 TRBV10-2A0A0K0K1G8 114 aa13.37□□□□□ -0.27
POLR2J3-203ENST00000464525 C9orf116Q5BN46 136 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-203ENST00000464525 NTN5Q8WTR8 489 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-203ENST00000464525 NANOS2P60321 138 aaKnown RBP13.36□□□□□ -0.27
POLR2J3-203ENST00000464525 ENHOQ6UWT2 76 aa13.35□□□□□ -0.27
POLR2J3-203ENST00000464525 CRPP02741 224 aa13.35□□□□□ -0.27
POLR2J3-203ENST00000464525 WFDC10BQ8IUB3 73 aa13.35□□□□□ -0.27
POLR2J3-203ENST00000464525 DNHD1Q96M86 4753 aa13.35□□□□□ -0.27
POLR2J3-203ENST00000464525 TEX49A0A1B0GTD5 131 aa13.34□□□□□ -0.27
POLR2J3-203ENST00000464525 C6orf223Q8N319 242 aa13.34□□□□□ -0.27
POLR2J3-203ENST00000464525 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
POLR2J3-203ENST00000464525 LINC01561Q8N1V8 128 aa13.34□□□□□ -0.27
POLR2J3-203ENST00000464525 TM2D3Q9BRN9 247 aa13.34□□□□□ -0.27
POLR2J3-203ENST00000464525 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
POLR2J3-203ENST00000464525 HUWE1Q7Z6Z7 4374 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-203ENST00000464525 TRAV13-2A0A0B4J235 113 aa13.33□□□□□ -0.28
POLR2J3-203ENST00000464525 PRR34Q9NV39 138 aa13.33□□□□□ -0.28
POLR2J3-203ENST00000464525 FAM218AQ96MZ4 157 aa13.32□□□□□ -0.28
POLR2J3-203ENST00000464525 PRR3P79522 188 aaKnown RBP13.31□□□□□ -0.28
POLR2J3-203ENST00000464525 C11orf45Q8TAV5 145 aa13.31□□□□□ -0.28
POLR2J3-203ENST00000464525 UBE2WQ96B02 151 aa13.31□□□□□ -0.28
POLR2J3-203ENST00000464525 C10orf25Q5T742 122 aa13.31□□□□□ -0.28
POLR2J3-203ENST00000464525 SMIM11BQ8TCY0 68 aa13.3□□□□□ -0.28
POLR2J3-203ENST00000464525 CDIP1Q9H305 208 aa13.29□□□□□ -0.28
POLR2J3-203ENST00000464525 ESRGQ1W209 222 aa13.29□□□□□ -0.28
POLR2J3-203ENST00000464525 UNQ6190/PRO20217Q6UXQ8 127 aa13.29□□□□□ -0.28
POLR2J3-203ENST00000464525 OR13C6PQ8NH95 151 aa13.29□□□□□ -0.28
POLR2J3-203ENST00000464525 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
POLR2J3-203ENST00000464525 RPL28P46779 137 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-203ENST00000464525 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
POLR2J3-203ENST00000464525 B5MCH6 92 aa13.27□□□□□ -0.29
POLR2J3-203ENST00000464525 SPAG11BQ08648 103 aa13.27□□□□□ -0.29
POLR2J3-203ENST00000464525 LINC01600Q96MT4 127 aa13.27□□□□□ -0.29
POLR2J3-203ENST00000464525 H3BNG1 76 aa13.27□□□□□ -0.29
POLR2J3-203ENST00000464525 H3BT86 120 aa13.25□□□□□ -0.29
POLR2J3-203ENST00000464525 KLK5Q9Y337 293 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-203ENST00000464525 CXCL5P42830 114 aa13.24□□□□□ -0.29
POLR2J3-203ENST00000464525 Q9HAA7 133 aa13.24□□□□□ -0.29
POLR2J3-203ENST00000464525 Q8NDZ9 215 aa13.23□□□□□ -0.29
POLR2J3-203ENST00000464525 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
POLR2J3-203ENST00000464525 A0A087WYN8 130 aa13.21□□□□□ -0.29
POLR2J3-203ENST00000464525 COX17Q14061 63 aa13.21□□□□□ -0.29
POLR2J3-203ENST00000464525 DNAH9Q9NYC9 4486 aa13.21□□□□□ -0.29
POLR2J3-203ENST00000464525 TRACP01848 142 aa13.19□□□□□ -0.3
POLR2J3-203ENST00000464525 XGP55808 180 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms