RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 SPAG11BQ08648 103 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 SPAG11AQ6PDA7 123 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 SMIM4Q8WVI0 70 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 V9GYH0 126 aa1.18□□□□□ -2.22
HERC4-208ENST00000463478 PRKDCP78527 4128 aaKnown RBP1.18□□□□□ -2.22
HERC4-208ENST00000463478 AFDNP55196 1824 aaKnown RBP1.17□□□□□ -2.22
HERC4-208ENST00000463478 ZNF469Q96JG9 3925 aaPredicted RBP1.17□□□□□ -2.22
HERC4-208ENST00000463478 NSD3Q9BZ95 1437 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 TRGV1A0A0A0MS02 117 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 PIN1P1O15428 100 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 LY6G6CO95867 125 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 COX6CP09669 75 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 ACYP2P14621 99 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 DEFB123Q8N688 67 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 NDUFA4L2Q9NRX3 87 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 LINC00474Q9P2X8 69 aa1.17□□□□□ -2.22
HERC4-208ENST00000463478 TNS1Q9HBL0 1735 aaKnown RBP1.17□□□□□ -2.22
HERC4-208ENST00000463478 ZNF609O15014 1411 aa1.16□□□□□ -2.22
HERC4-208ENST00000463478 GVQW2A0A096LPI5 108 aaPredicted RBP1.16□□□□□ -2.22
HERC4-208ENST00000463478 PRR15LQ9BU68 103 aa1.16□□□□□ -2.22
HERC4-208ENST00000463478 GAPVD1Q14C86 1478 aa1.16□□□□□ -2.22
HERC4-208ENST00000463478 SPHKAPQ2M3C7 1700 aa1.15□□□□□ -2.22
HERC4-208ENST00000463478 PHIPQ8WWQ0 1821 aa1.15□□□□□ -2.22
HERC4-208ENST00000463478 UQCR11O14957 56 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 SNCAP37840 140 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 UBE2D3P61077 147 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 UBE2D2P62837 147 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 COX17Q14061 63 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 NCMAPQ5T1S8 102 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 TMEM170BQ5T4T1 132 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 PROK2Q9HC23 129 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 KIF21AQ7Z4S6 1674 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 ARAP2Q8WZ64 1704 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 CPS1P31327 1500 aa1.15□□□□□ -2.23
HERC4-208ENST00000463478 TROQ12816 1431 aaPredicted RBP1.15□□□□□ -2.23
HERC4-208ENST00000463478 PLXNA1Q9UIW2 1896 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 HECTD4Q9Y4D8 3996 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 MRC1P22897 1456 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 FYCO1Q9BQS8 1478 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 ACACAQ13085 2346 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 M0R135 149 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 HMGN4O00479 90 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 APOC3P02656 99 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 SPTBP11277 2137 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 Q6ZRX8 168 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 PRO1854Q9UHT4 67 aa1.14□□□□□ -2.23
HERC4-208ENST00000463478 RNF17Q9BXT8 1623 aaKnown RBP1.14□□□□□ -2.23
HERC4-208ENST00000463478 ESPL1Q14674 2120 aa1.13□□□□□ -2.23
HERC4-208ENST00000463478 TRAV1-2A0A0B4J238 106 aa1.13□□□□□ -2.23
HERC4-208ENST00000463478 F8VRH5 84 aa1.13□□□□□ -2.23
HERC4-208ENST00000463478 CHKB-CPT1BH3BT56 60 aa1.13□□□□□ -2.23
HERC4-208ENST00000463478 MPC2O95563 127 aa1.13□□□□□ -2.23
HERC4-208ENST00000463478 ABCC5O15440 1437 aa1.13□□□□□ -2.23
HERC4-208ENST00000463478 USH2AO75445 5202 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 TULP4Q9NRJ4 1543 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 TRAV22A0A0B4J277 110 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 CRYM-AS1A6NIL9 109 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 SFT2D2O95562 160 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 GCHFRP30047 84 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 Q0VG73 95 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 BAGE2Q86Y30 109 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 TSLPQ969D9 159 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 LINC01558Q9Y6Z2 57 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 ROBO1Q9Y6N7 1651 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 AKAP9Q99996 3911 aa1.12□□□□□ -2.23
HERC4-208ENST00000463478 ROS1P08922 2347 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 ATOX1O00244 68 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 GNGT2O14610 69 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 UBA52P62987 128 aaKnown RBP1.11□□□□□ -2.23
HERC4-208ENST00000463478 SEC11AP67812 179 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 SNHG12Q9BXW3 62 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 MANBALQ9NQG1 85 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 PKDREJQ9NTG1 2253 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 MAGI1Q96QZ7 1491 aaPredicted RBP1.11□□□□□ -2.23
HERC4-208ENST00000463478 SHROOM2Q13796 1616 aa1.11□□□□□ -2.23
HERC4-208ENST00000463478 LAMA4Q16363 1823 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 PATJQ8NI35 1801 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 PRDM15P57071 1507 aaPredicted RBP1.1□□□□□ -2.23
HERC4-208ENST00000463478 CTXND1A0A1B0GTU2 59 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 IGLC7A0M8Q6 106 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 ASIPP42127 132 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 NXT2Q9NPJ8 142 aaKnown RBP1.1□□□□□ -2.23
HERC4-208ENST00000463478 MYCBP2O75592 4640 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 DNAH7Q8WXX0 4024 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 AHCTF1Q8WYP5 2266 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 FAT3Q8TDW7 4589 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 PARP14Q460N5 1801 aa1.1□□□□□ -2.23
HERC4-208ENST00000463478 ASXL3Q9C0F0 2248 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 hADV29S1A0JD25 119 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 MT-ATP8P03928 68 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 TRAPPC2P0DI81 140 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 TRAPPC2BP0DI82 140 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 CFAP126Q5VTH2 177 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 FAM213BQ8TBF2 198 aa1.09□□□□□ -2.23
HERC4-208ENST00000463478 GOLGA3Q08378 1498 aa1.09□□□□□ -2.24
HERC4-208ENST00000463478 RGPD1P0DJD0 1748 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms