RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
VAPB-203ENST00000463370 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
VAPB-203ENST00000463370 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 WFDC2Q14508 124 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 H3BNG1 76 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 FOXI1Q12951 378 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 Q1RN00 199 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
VAPB-203ENST00000463370 ESRGQ1W209 222 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 TM2D3Q9BRN9 247 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 DNAH9Q9NYC9 4486 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 COX7A2LO14548 114 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 PFN2P35080 140 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 OCIAD2Q56VL3 154 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
VAPB-203ENST00000463370 TRIAP1O43715 76 aa8.68□□□□□ -1.02
VAPB-203ENST00000463370 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
VAPB-203ENST00000463370 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
VAPB-203ENST00000463370 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
VAPB-203ENST00000463370 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
VAPB-203ENST00000463370 LINC00158P58513 81 aa8.68□□□□□ -1.02
VAPB-203ENST00000463370 Q8IZM0 81 aa8.68□□□□□ -1.02
VAPB-203ENST00000463370 GAGE12HA6NDE8 117 aa8.67□□□□□ -1.02
VAPB-203ENST00000463370 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
VAPB-203ENST00000463370 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
VAPB-203ENST00000463370 F8W1H4 67 aa8.66□□□□□ -1.02
VAPB-203ENST00000463370 UBE2WQ96B02 151 aa8.66□□□□□ -1.02
VAPB-203ENST00000463370 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.02
VAPB-203ENST00000463370 MALP21145 153 aa8.65□□□□□ -1.02
VAPB-203ENST00000463370 LINC01561Q8N1V8 128 aa8.65□□□□□ -1.02
VAPB-203ENST00000463370 LINC00526Q96FQ7 95 aa8.65□□□□□ -1.02
VAPB-203ENST00000463370 LYSTQ99698 3801 aa8.65□□□□□ -1.02
VAPB-203ENST00000463370 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
VAPB-203ENST00000463370 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
VAPB-203ENST00000463370 CCL18P55774 89 aa8.64□□□□□ -1.03
VAPB-203ENST00000463370 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
VAPB-203ENST00000463370 LYRM7Q5U5X0 104 aa8.64□□□□□ -1.03
VAPB-203ENST00000463370 TRBV20-1A0A075B6N2 111 aa8.63□□□□□ -1.03
VAPB-203ENST00000463370 ETDBQ3ZM63 59 aa8.63□□□□□ -1.03
VAPB-203ENST00000463370 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
VAPB-203ENST00000463370 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
VAPB-203ENST00000463370 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
VAPB-203ENST00000463370 CKS1BP61024 79 aa8.63□□□□□ -1.03
VAPB-203ENST00000463370 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 STAB2Q8WWQ8 2551 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 CRPP02741 224 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 DNHD1Q96M86 4753 aa8.62□□□□□ -1.03
VAPB-203ENST00000463370 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
VAPB-203ENST00000463370 RNF151Q2KHN1 245 aa8.61□□□□□ -1.03
VAPB-203ENST00000463370 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
VAPB-203ENST00000463370 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
VAPB-203ENST00000463370 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
VAPB-203ENST00000463370 PPDPFQ9H3Y8 114 aa8.6□□□□□ -1.03
VAPB-203ENST00000463370 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
VAPB-203ENST00000463370 UNQ6190/PRO20217Q6UXQ8 127 aa8.59□□□□□ -1.03
VAPB-203ENST00000463370 C9JAW5 83 aa8.58□□□□□ -1.04
VAPB-203ENST00000463370 K7ERU9 68 aa8.58□□□□□ -1.04
VAPB-203ENST00000463370 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
VAPB-203ENST00000463370 ATXN8Q156A1 80 aa8.58□□□□□ -1.04
VAPB-203ENST00000463370 CXCL5P42830 114 aa8.57□□□□□ -1.04
VAPB-203ENST00000463370 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
VAPB-203ENST00000463370 LINC01620Q4KN68 170 aa8.57□□□□□ -1.04
VAPB-203ENST00000463370 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
VAPB-203ENST00000463370 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
VAPB-203ENST00000463370 Q8NDZ9 215 aa8.56□□□□□ -1.04
VAPB-203ENST00000463370 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
VAPB-203ENST00000463370 SLC25A20O43772 301 aa8.56□□□□□ -1.04
VAPB-203ENST00000463370 COX6CP09669 75 aa8.56□□□□□ -1.04
VAPB-203ENST00000463370 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
VAPB-203ENST00000463370 TRAV13-2A0A0B4J235 113 aa8.55□□□□□ -1.04
VAPB-203ENST00000463370 LST1O00453 97 aa8.55□□□□□ -1.04
VAPB-203ENST00000463370 PRKDCP78527 4128 aaKnown RBP8.55□□□□□ -1.04
VAPB-203ENST00000463370 C15orf53Q8NAA6 179 aa8.54□□□□□ -1.04
VAPB-203ENST00000463370 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
VAPB-203ENST00000463370 COX17Q14061 63 aa8.54□□□□□ -1.04
VAPB-203ENST00000463370 NTN5Q8WTR8 489 aaPredicted RBP8.54□□□□□ -1.04
VAPB-203ENST00000463370 Q9HAA7 133 aa8.54□□□□□ -1.04
VAPB-203ENST00000463370 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 SMIM11BQ8TCY0 68 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 FAM218AQ96MZ4 157 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
VAPB-203ENST00000463370 DYNC2H1Q8NCM8 4307 aaKnown RBP8.52□□□□□ -1.05
VAPB-203ENST00000463370 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
VAPB-203ENST00000463370 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
VAPB-203ENST00000463370 DNAH10Q8IVF4 4471 aa8.52□□□□□ -1.05
VAPB-203ENST00000463370 DNAH7Q8WXX0 4024 aa8.51□□□□□ -1.05
VAPB-203ENST00000463370 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
VAPB-203ENST00000463370 OR13C6PQ8NH95 151 aa8.51□□□□□ -1.05
VAPB-203ENST00000463370 VPS25Q9BRG1 176 aa8.51□□□□□ -1.05
VAPB-203ENST00000463370 TRBV10-2A0A0K0K1G8 114 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms