RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 USP24Q9UPU5 2620 aa6.36□□□□□ -1.39
LINC01140-201ENST00000461990 SYCNQ0VAF6 134 aa6.36□□□□□ -1.39
LINC01140-201ENST00000461990 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
LINC01140-201ENST00000461990 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
LINC01140-201ENST00000461990 NDUFS5O43920 106 aa6.35□□□□□ -1.39
LINC01140-201ENST00000461990 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
LINC01140-201ENST00000461990 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
LINC01140-201ENST00000461990 M0R378 163 aa6.35□□□□□ -1.39
LINC01140-201ENST00000461990 IGKV4-1P06312 121 aa6.35□□□□□ -1.39
LINC01140-201ENST00000461990 CEP295Q9C0D2 2601 aa6.35□□□□□ -1.39
LINC01140-201ENST00000461990 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
LINC01140-201ENST00000461990 SPATA3Q8NHX4 192 aa6.34□□□□□ -1.39
LINC01140-201ENST00000461990 HIGD2AQ9BW72 106 aa6.34□□□□□ -1.39
LINC01140-201ENST00000461990 ACACBO00763 2458 aa6.34□□□□□ -1.39
LINC01140-201ENST00000461990 IGFL3Q6UXB1 125 aa6.33□□□□□ -1.4
LINC01140-201ENST00000461990 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
LINC01140-201ENST00000461990 TOMM7Q9P0U1 55 aa6.33□□□□□ -1.4
LINC01140-201ENST00000461990 PSPHP1O15172 72 aa6.33□□□□□ -1.4
LINC01140-201ENST00000461990 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
LINC01140-201ENST00000461990 DEFB114Q30KQ6 69 aa6.32□□□□□ -1.4
LINC01140-201ENST00000461990 LINC01356Q8N9X3 169 aa6.32□□□□□ -1.4
LINC01140-201ENST00000461990 AKAP13Q12802 2813 aa6.32□□□□□ -1.4
LINC01140-201ENST00000461990 PSCAO43653 123 aa6.32□□□□□ -1.4
LINC01140-201ENST00000461990 APC2O95996 2303 aa6.32□□□□□ -1.4
LINC01140-201ENST00000461990 DOPEY2Q9Y3R5 2298 aa6.32□□□□□ -1.4
LINC01140-201ENST00000461990 MAP1AP78559 2803 aaPredicted RBP6.31□□□□□ -1.4
LINC01140-201ENST00000461990 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
LINC01140-201ENST00000461990 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
LINC01140-201ENST00000461990 RNASE1P07998 156 aaKnown RBP6.31□□□□□ -1.4
LINC01140-201ENST00000461990 Q5VV11 94 aa6.31□□□□□ -1.4
LINC01140-201ENST00000461990 PLA2G2AP14555 144 aa6.31□□□□□ -1.4
LINC01140-201ENST00000461990 ZFP36P26651 326 aaKnown RBP6.31□□□□□ -1.4
LINC01140-201ENST00000461990 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
LINC01140-201ENST00000461990 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
LINC01140-201ENST00000461990 UBE2AP49459 152 aa6.3□□□□□ -1.4
LINC01140-201ENST00000461990 UBE2E2Q96LR5 201 aa6.3□□□□□ -1.4
LINC01140-201ENST00000461990 ANKRD11Q6UB99 2663 aaPredicted RBP6.3□□□□□ -1.4
LINC01140-201ENST00000461990 TRBV6-8A0A0A6YYG3 113 aa6.3□□□□□ -1.4
LINC01140-201ENST00000461990 COX17Q14061 63 aa6.3□□□□□ -1.4
LINC01140-201ENST00000461990 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
LINC01140-201ENST00000461990 CHD8Q9HCK8 2581 aa6.3□□□□□ -1.4
LINC01140-201ENST00000461990 RELNP78509 3460 aa6.29□□□□□ -1.4
LINC01140-201ENST00000461990 COL6A6A6NMZ7 2263 aa6.29□□□□□ -1.4
LINC01140-201ENST00000461990 UBE2L6O14933 153 aa6.29□□□□□ -1.4
LINC01140-201ENST00000461990 APOC4P55056 127 aa6.29□□□□□ -1.4
LINC01140-201ENST00000461990 A6NN06 94 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 Q8IZM0 81 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 IGHV4-30-2A0A087WSY4 118 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 A8MUN3 132 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 C16orf90A8MZG2 172 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 LINC00269Q8N2A0 174 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 HTN1P15515 57 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 COX7BP24311 80 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
LINC01140-201ENST00000461990 TLN1Q9Y490 2541 aaKnown RBP6.28□□□□□ -1.4
LINC01140-201ENST00000461990 IGF2RP11717 2491 aa6.27□□□□□ -1.41
LINC01140-201ENST00000461990 ATRXP46100 2492 aa6.27□□□□□ -1.41
LINC01140-201ENST00000461990 EPG5Q9HCE0 2579 aa6.27□□□□□ -1.41
LINC01140-201ENST00000461990 C11orf45Q8TAV5 145 aa6.27□□□□□ -1.41
LINC01140-201ENST00000461990 A8MU10 97 aa6.27□□□□□ -1.41
LINC01140-201ENST00000461990 PRR3P79522 188 aaKnown RBP6.27□□□□□ -1.41
LINC01140-201ENST00000461990 LINC01006Q8NI28 216 aa6.27□□□□□ -1.41
LINC01140-201ENST00000461990 COL12A1Q99715 3063 aa6.26□□□□□ -1.41
LINC01140-201ENST00000461990 ASH1LQ9NR48 2969 aaKnown RBP6.26□□□□□ -1.41
LINC01140-201ENST00000461990 FAM208BQ5VWN6 2430 aa6.26□□□□□ -1.41
LINC01140-201ENST00000461990 ZNF73O43830 326 aaPredicted RBP6.26□□□□□ -1.41
LINC01140-201ENST00000461990 PRM2P04554 102 aa6.26□□□□□ -1.41
LINC01140-201ENST00000461990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
LINC01140-201ENST00000461990 Q6ZQY7 126 aa6.26□□□□□ -1.41
LINC01140-201ENST00000461990 SVEP1Q4LDE5 3571 aa6.26□□□□□ -1.41
LINC01140-201ENST00000461990 LRBAP50851 2863 aa6.25□□□□□ -1.41
LINC01140-201ENST00000461990 LINC00612Q8N6U2 182 aa6.25□□□□□ -1.41
LINC01140-201ENST00000461990 CELA1Q9UNI1 258 aa6.25□□□□□ -1.41
LINC01140-201ENST00000461990 LIMD2Q9BT23 127 aa6.25□□□□□ -1.41
LINC01140-201ENST00000461990 IGLV4-60A0A075B6I1 120 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 ITPR1Q14643 2758 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 IGHV4-28A0A0C4DH34 117 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 DEFB109BQ30KR1 87 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 C11orf71Q6IPW1 123 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 IGLV6-57P01721 117 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
LINC01140-201ENST00000461990 Q8N9L7 120 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 DIRC1Q969H9 104 aa6.24□□□□□ -1.41
LINC01140-201ENST00000461990 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
LINC01140-201ENST00000461990 C19orf84I3L1E1 186 aa6.23□□□□□ -1.41
LINC01140-201ENST00000461990 C7orf65Q6ZTY9 151 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 CCL24O00175 119 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 Q8NDZ9 215 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 LINC00959A0A1B0GUT2 108 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 NDUFB1O75438 58 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 Q75L30 129 aa6.22□□□□□ -1.41
LINC01140-201ENST00000461990 HCG22E2RYF7 251 aa6.21□□□□□ -1.41
LINC01140-201ENST00000461990 INSP01308 110 aa6.21□□□□□ -1.41
LINC01140-201ENST00000461990 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.41
LINC01140-201ENST00000461990 CHD6Q8TD26 2715 aa6.21□□□□□ -1.42
LINC01140-201ENST00000461990 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms