RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PTPRZ1P23471 2315 aaPredicted RBP0.77□□□□□ -2.29
HDAC6-212ENST00000461608 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 LAMA3Q16787 3333 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 UNC80Q8N2C7 3258 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 ZDBF2Q9HCK1 2354 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 TET1Q8NFU7 2136 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 CHD3Q12873 2000 aaKnown RBP0.76□□□□□ -2.29
HDAC6-212ENST00000461608 TANC1Q9C0D5 1861 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 KIAA1549LQ6ZVL6 1849 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 A0A087WTM6 91 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 TRBV7-7A0A0K0K1E9 115 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 HMGN4O00479 90 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 TMEM170BQ5T4T1 132 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 FAM74A4Q5TZK3 123 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 Q6ZQY7 126 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 FAM223AQ8IWN6 122 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 Q8N6K4 173 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 LCN9Q8WX39 176 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 TRGV9Q99603 122 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 DYNLRB1Q9NP97 96 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 HIGD1BQ9P298 99 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 UQCR10Q9UDW1 63 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 PRO1854Q9UHT4 67 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 ARL2-SNX15V9GYD0 113 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 V9GYH0 126 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
HDAC6-212ENST00000461608 VCANP13611 3396 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 MUC3AQ02505 3323 aa0.76□□□□□ -2.29
HDAC6-212ENST00000461608 PLXNA2O75051 1894 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 COL4A6Q14031 1691 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 ROS1P08922 2347 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 MYO7AQ13402 2215 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 PRUNE2Q8WUY3 3088 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 UQCRHLA0A096LP55 91 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 TRGV1A0A0A0MS02 117 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 CTXND1A0A1B0GTU2 59 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 SYS1-DBNDD2H3BUS1 97 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 M0R135 149 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 M0R3E3 92 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 CAV3P56539 151 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 UBE2D3P61077 147 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 UBE2D2P62837 147 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 ZNF720Q7Z2F6 126 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 FAM167A-AS1Q96KT0 104 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 SPTBN5Q9NRC6 3674 aaKnown RBP0.75□□□□□ -2.29
HDAC6-212ENST00000461608 MYH4Q9Y623 1939 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 CDH23Q9H251 3354 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 A0A0C4DFX4 3053 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 CACNA1HO95180 2353 aa0.75□□□□□ -2.29
HDAC6-212ENST00000461608 SPAG17Q6Q759 2223 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 SNRNP200O75643 2136 aaKnown RBP0.74□□□□□ -2.29
HDAC6-212ENST00000461608 EYSQ5T1H1 3165 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 CACNA1AO00555 2505 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 RIF1Q5UIP0 2472 aaKnown RBP0.74□□□□□ -2.29
HDAC6-212ENST00000461608 TPRP12270 2363 aaKnown RBP0.74□□□□□ -2.29
HDAC6-212ENST00000461608 PATJQ8NI35 1801 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 TRBV30A0A0K0K1B3 111 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 IGLC7A0M8Q6 106 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 TMEM14DPA8MWL7 114 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 LOC730098B7Z3J9 87 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 F8VRH5 84 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 H7BZZ5 65 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 NDUFC1O43677 76 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 WFDC2Q14508 124 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 ETDBQ3ZM63 59 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 NMSQ5H8A3 153 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 FDCSPQ8NFU4 85 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 PPP1R1CQ8WVI7 109 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 Q96NJ1 140 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 S100A13Q99584 98 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 WFDC6Q9BQY6 131 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 CDC42SE2Q9NRR3 84 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 Q9Y3F1 56 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 LENEPQ9Y5L5 61 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 SPCS1Q9Y6A9 102 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 R4GMQ9 66 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 MED12Q93074 2177 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 LAMA2P24043 3122 aaKnown RBP0.74□□□□□ -2.29
HDAC6-212ENST00000461608 PTPRDP23468 1912 aa0.74□□□□□ -2.29
HDAC6-212ENST00000461608 PI4KAP42356 2102 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 MAP1BP46821 2468 aaKnown RBP0.73□□□□□ -2.29
HDAC6-212ENST00000461608 NINQ8N4C6 2090 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 TRAV1-2A0A0B4J238 106 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 FAM223BA6NKX1 122 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 ZNF815PA8K554 130 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 LY6G6CO95867 125 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 UQCRHP07919 91 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 COX6CP09669 75 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 ACYP2P14621 99 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 SPINT3P49223 89 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 CCL18P55774 89 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 KLKP1Q107X0 134 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 PMCHL1Q16048 86 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 PRR15LQ9BU68 103 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 TMEM14BQ9NUH8 114 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 PSENENQ9NZ42 101 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 SPTBN4Q9H254 2564 aa0.73□□□□□ -2.29
HDAC6-212ENST00000461608 PDCD11Q14690 1871 aaKnown RBP0.73□□□□□ -2.29
HDAC6-212ENST00000461608 PKD1L2Q7Z442 2459 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms