RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 C16orf95Q9H693 158 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 SMIM26A0A096LP01 95 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 A8MTW9 85 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 DEFB114Q30KQ6 69 aa8.38□□□□□ -1.07
SYNE2-207ENST00000458046 DAND5Q8N907 189 aa8.38□□□□□ -1.07
SYNE2-207ENST00000458046 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
SYNE2-207ENST00000458046 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
SYNE2-207ENST00000458046 C4orf3Q8WVX3 66 aa8.37□□□□□ -1.07
SYNE2-207ENST00000458046 INSP01308 110 aa8.36□□□□□ -1.07
SYNE2-207ENST00000458046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-207ENST00000458046 BIRC6Q9NR09 4857 aa8.36□□□□□ -1.07
SYNE2-207ENST00000458046 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
SYNE2-207ENST00000458046 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
SYNE2-207ENST00000458046 COX6A2Q02221 97 aa8.36□□□□□ -1.07
SYNE2-207ENST00000458046 Q8N2B8 174 aa8.36□□□□□ -1.07
SYNE2-207ENST00000458046 TRGV1A0A0A0MS02 117 aa8.35□□□□□ -1.07
SYNE2-207ENST00000458046 MIAQ16674 131 aa8.35□□□□□ -1.07
SYNE2-207ENST00000458046 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-207ENST00000458046 ODF3L2Q3SX64 289 aa8.35□□□□□ -1.07
SYNE2-207ENST00000458046 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-207ENST00000458046 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-207ENST00000458046 CR1P17927 2039 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 A8MUN3 132 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 C6orf99Q4VX62 202 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 CCDC168Q8NDH2 2452 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 DEFB113Q30KQ7 82 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 ICOSQ9Y6W8 199 aa8.34□□□□□ -1.07
SYNE2-207ENST00000458046 NBEAL1Q6ZS30 2694 aa8.34□□□□□ -1.08
SYNE2-207ENST00000458046 C9orf153Q5TBE3 101 aa8.33□□□□□ -1.08
SYNE2-207ENST00000458046 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
SYNE2-207ENST00000458046 KTN1-AS1Q86SY8 53 aa8.33□□□□□ -1.08
SYNE2-207ENST00000458046 CLEC2BQ92478 149 aa8.33□□□□□ -1.08
SYNE2-207ENST00000458046 LINC00313P59037 77 aa8.32□□□□□ -1.08
SYNE2-207ENST00000458046 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
SYNE2-207ENST00000458046 Q6ZTI0 123 aa8.32□□□□□ -1.08
SYNE2-207ENST00000458046 TMEM262E9PQX1 116 aa8.31□□□□□ -1.08
SYNE2-207ENST00000458046 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
SYNE2-207ENST00000458046 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
SYNE2-207ENST00000458046 K7EQD1 137 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 LST1O00453 97 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 H7C423 109 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 COX6CP09669 75 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
SYNE2-207ENST00000458046 NDUFA1O15239 70 aa8.29□□□□□ -1.08
SYNE2-207ENST00000458046 TMEM258P61165 79 aa8.29□□□□□ -1.08
SYNE2-207ENST00000458046 STAB1Q9NY15 2570 aa8.29□□□□□ -1.08
SYNE2-207ENST00000458046 MP68P56378 58 aa8.29□□□□□ -1.08
SYNE2-207ENST00000458046 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
SYNE2-207ENST00000458046 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
SYNE2-207ENST00000458046 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
SYNE2-207ENST00000458046 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
SYNE2-207ENST00000458046 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
SYNE2-207ENST00000458046 NOP10Q9NPE3 64 aaKnown RBP8.28□□□□□ -1.08
SYNE2-207ENST00000458046 EPM2AB3EWF7 344 aa8.27□□□□□ -1.08
SYNE2-207ENST00000458046 LINC00308Q8TCZ7 52 aa8.27□□□□□ -1.08
SYNE2-207ENST00000458046 IGHV3OR16-9A0A0B4J2B5 98 aa8.27□□□□□ -1.09
SYNE2-207ENST00000458046 DNAJC9-AS1A6NH13 148 aa8.27□□□□□ -1.09
SYNE2-207ENST00000458046 M0R378 163 aa8.27□□□□□ -1.09
SYNE2-207ENST00000458046 TIMM17BO60830 172 aa8.27□□□□□ -1.09
SYNE2-207ENST00000458046 UBE2WQ96B02 151 aa8.27□□□□□ -1.09
SYNE2-207ENST00000458046 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
SYNE2-207ENST00000458046 FLNAP21333 2647 aaKnown RBP8.27□□□□□ -1.09
SYNE2-207ENST00000458046 SNCGO76070 127 aa8.26□□□□□ -1.09
SYNE2-207ENST00000458046 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
SYNE2-207ENST00000458046 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
SYNE2-207ENST00000458046 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
SYNE2-207ENST00000458046 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-207ENST00000458046 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
SYNE2-207ENST00000458046 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
SYNE2-207ENST00000458046 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
SYNE2-207ENST00000458046 UQCRQO14949 82 aa8.25□□□□□ -1.09
SYNE2-207ENST00000458046 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-207ENST00000458046 ACANP16112 2415 aa8.24□□□□□ -1.09
SYNE2-207ENST00000458046 TRGV2A0A075B6R0 118 aa8.24□□□□□ -1.09
SYNE2-207ENST00000458046 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
SYNE2-207ENST00000458046 TRBV10-1A0A0K0K1A3 114 aa8.24□□□□□ -1.09
SYNE2-207ENST00000458046 UBE2L6O14933 153 aa8.23□□□□□ -1.09
SYNE2-207ENST00000458046 GIG44P09565 113 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-207ENST00000458046 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
SYNE2-207ENST00000458046 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
SYNE2-207ENST00000458046 H3BT86 120 aa8.22□□□□□ -1.09
SYNE2-207ENST00000458046 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
SYNE2-207ENST00000458046 C15orf53Q8NAA6 179 aa8.21□□□□□ -1.09
SYNE2-207ENST00000458046 TMEM243Q9BU79 118 aa8.21□□□□□ -1.09
SYNE2-207ENST00000458046 ANK2Q01484 3957 aa8.21□□□□□ -1.1
SYNE2-207ENST00000458046 DSCR8Q96T75 97 aa8.21□□□□□ -1.1
SYNE2-207ENST00000458046 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
SYNE2-207ENST00000458046 LY6G6DO95868 133 aa8.2□□□□□ -1.1
SYNE2-207ENST00000458046 CRYGAP11844 174 aa8.2□□□□□ -1.1
SYNE2-207ENST00000458046 REG3GQ6UW15 175 aa8.2□□□□□ -1.1
SYNE2-207ENST00000458046 TRGV4A0A0C4DH28 118 aa8.19□□□□□ -1.1
SYNE2-207ENST00000458046 LINC01006Q8NI28 216 aa8.19□□□□□ -1.1
SYNE2-207ENST00000458046 COL6A5A8TX70 2615 aa8.19□□□□□ -1.1
SYNE2-207ENST00000458046 IGHV4-28A0A0C4DH34 117 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms