RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 APCP25054 2843 aa12.27□□□□□ -0.45
PTPN6-204ENST00000456013 GYPEP15421 78 aa12.27□□□□□ -0.45
PTPN6-204ENST00000456013 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.45
PTPN6-204ENST00000456013 XCL1P47992 114 aa12.26□□□□□ -0.45
PTPN6-204ENST00000456013 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
PTPN6-204ENST00000456013 ZFYVE26Q68DK2 2539 aa12.26□□□□□ -0.45
PTPN6-204ENST00000456013 USP24Q9UPU5 2620 aa12.26□□□□□ -0.45
PTPN6-204ENST00000456013 LINC01561Q8N1V8 128 aa12.26□□□□□ -0.45
PTPN6-204ENST00000456013 UQCRQO14949 82 aa12.25□□□□□ -0.45
PTPN6-204ENST00000456013 HIST1H4AP62805 103 aaKnown RBP12.23□□□□□ -0.45
PTPN6-204ENST00000456013 KRTAP1-1Q07627 177 aa12.23□□□□□ -0.45
PTPN6-204ENST00000456013 SMIM20Q8N5G0 67 aa12.23□□□□□ -0.45
PTPN6-204ENST00000456013 ORMDL1Q9P0S3 153 aa12.23□□□□□ -0.45
PTPN6-204ENST00000456013 SLPIP03973 132 aa12.22□□□□□ -0.45
PTPN6-204ENST00000456013 C3orf56Q8N813 242 aa12.22□□□□□ -0.45
PTPN6-204ENST00000456013 NCR3O14931 201 aa12.22□□□□□ -0.45
PTPN6-204ENST00000456013 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
PTPN6-204ENST00000456013 Q6JHZ5 121 aa12.21□□□□□ -0.45
PTPN6-204ENST00000456013 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
PTPN6-204ENST00000456013 LINC00846Q9NV44 126 aa12.21□□□□□ -0.45
PTPN6-204ENST00000456013 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
PTPN6-204ENST00000456013 CUBNO60494 3623 aa12.21□□□□□ -0.45
PTPN6-204ENST00000456013 NIPBLQ6KC79 2804 aaeCLIP12.21□□□□□ -0.45
PTPN6-204ENST00000456013 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.45
PTPN6-204ENST00000456013 LINC00167Q96N53 147 aa12.21□□□□□ -0.46
PTPN6-204ENST00000456013 CLPSL2Q6UWE3 100 aa12.2□□□□□ -0.46
PTPN6-204ENST00000456013 A0A1B0GX51 115 aa12.2□□□□□ -0.46
PTPN6-204ENST00000456013 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
PTPN6-204ENST00000456013 X6R8D5 127 aa12.19□□□□□ -0.46
PTPN6-204ENST00000456013 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
PTPN6-204ENST00000456013 ATOX1O00244 68 aa12.19□□□□□ -0.46
PTPN6-204ENST00000456013 COX7CP15954 63 aa12.19□□□□□ -0.46
PTPN6-204ENST00000456013 NDUFC2O95298 119 aa12.18□□□□□ -0.46
PTPN6-204ENST00000456013 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
PTPN6-204ENST00000456013 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
PTPN6-204ENST00000456013 COX17Q14061 63 aa12.18□□□□□ -0.46
PTPN6-204ENST00000456013 C2orf48Q96LS8 159 aa12.18□□□□□ -0.46
PTPN6-204ENST00000456013 A0A096LPF7 62 aa12.16□□□□□ -0.46
PTPN6-204ENST00000456013 CD164L2Q6UWJ8 174 aa12.16□□□□□ -0.46
PTPN6-204ENST00000456013 IGKV3D-7A0A0C4DH55 119 aa12.16□□□□□ -0.46
PTPN6-204ENST00000456013 Q8N814 137 aa12.16□□□□□ -0.46
PTPN6-204ENST00000456013 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
PTPN6-204ENST00000456013 CCKP06307 115 aa12.15□□□□□ -0.46
PTPN6-204ENST00000456013 PRR3P79522 188 aaKnown RBP12.15□□□□□ -0.46
PTPN6-204ENST00000456013 CCDC168Q8NDH2 2452 aa12.15□□□□□ -0.46
PTPN6-204ENST00000456013 HILS1P60008 231 aa12.15□□□□□ -0.46
PTPN6-204ENST00000456013 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
PTPN6-204ENST00000456013 RPL18AQ02543 176 aaKnown RBP12.14□□□□□ -0.47
PTPN6-204ENST00000456013 LINC00269Q8N2A0 174 aa12.14□□□□□ -0.47
PTPN6-204ENST00000456013 IGHV4-28A0A0C4DH34 117 aa12.14□□□□□ -0.47
PTPN6-204ENST00000456013 JMJD7-PLA2G4BH0Y9G9 81 aa12.14□□□□□ -0.47
PTPN6-204ENST00000456013 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
PTPN6-204ENST00000456013 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
PTPN6-204ENST00000456013 TMEM256-PLSCR3K7ERE1 68 aa12.12□□□□□ -0.47
PTPN6-204ENST00000456013 LINC00482Q8N8I6 264 aa12.12□□□□□ -0.47
PTPN6-204ENST00000456013 CRYGAP11844 174 aa12.12□□□□□ -0.47
PTPN6-204ENST00000456013 KRTAP10-3P60369 221 aa12.11□□□□□ -0.47
PTPN6-204ENST00000456013 REG3AQ06141 175 aa12.1□□□□□ -0.47
PTPN6-204ENST00000456013 ANGP03950 147 aaKnown RBP12.1□□□□□ -0.47
PTPN6-204ENST00000456013 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
PTPN6-204ENST00000456013 IGLV10-54A0A075B6I4 117 aa12.08□□□□□ -0.47
PTPN6-204ENST00000456013 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.47
PTPN6-204ENST00000456013 A0A087WVE0 104 aa12.08□□□□□ -0.48
PTPN6-204ENST00000456013 S100A7L2Q5SY68 101 aa12.08□□□□□ -0.48
PTPN6-204ENST00000456013 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
PTPN6-204ENST00000456013 Q8N3U1 123 aa12.07□□□□□ -0.48
PTPN6-204ENST00000456013 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
PTPN6-204ENST00000456013 Q8NDZ9 215 aa12.06□□□□□ -0.48
PTPN6-204ENST00000456013 SERP2Q8N6R1 65 aa12.05□□□□□ -0.48
PTPN6-204ENST00000456013 PDZD2O15018 2839 aa12.04□□□□□ -0.48
PTPN6-204ENST00000456013 ACANP16112 2415 aa12.04□□□□□ -0.48
PTPN6-204ENST00000456013 USP17L23D6RBM5 183 aa12.04□□□□□ -0.48
PTPN6-204ENST00000456013 ATP5EP2Q5VTU8 51 aa12.04□□□□□ -0.48
PTPN6-204ENST00000456013 LINC00575Q6W349 94 aa12.04□□□□□ -0.48
PTPN6-204ENST00000456013 MUC7Q8TAX7 377 aa12.04□□□□□ -0.48
PTPN6-204ENST00000456013 hADV29S1A0JD25 119 aa12.03□□□□□ -0.48
PTPN6-204ENST00000456013 DEFB4AO15263 64 aa12.03□□□□□ -0.48
PTPN6-204ENST00000456013 DEFB135Q30KP9 77 aa12.03□□□□□ -0.48
PTPN6-204ENST00000456013 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
PTPN6-204ENST00000456013 MTORP42345 2549 aa12.02□□□□□ -0.48
PTPN6-204ENST00000456013 DAD1P61803 113 aa12.02□□□□□ -0.49
PTPN6-204ENST00000456013 C10orf25Q5T742 122 aa12□□□□□ -0.49
PTPN6-204ENST00000456013 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
PTPN6-204ENST00000456013 SPAG11BQ08648 103 aa12□□□□□ -0.49
PTPN6-204ENST00000456013 C9orf66Q5T8R8 295 aa12□□□□□ -0.49
PTPN6-204ENST00000456013 C6orf223Q8N319 242 aa12□□□□□ -0.49
PTPN6-204ENST00000456013 UPK3BQ9BT76 320 aa12□□□□□ -0.49
PTPN6-204ENST00000456013 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
PTPN6-204ENST00000456013 IGHV4-30-4P0DP06 118 aa11.99□□□□□ -0.49
PTPN6-204ENST00000456013 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
PTPN6-204ENST00000456013 CYSTM1Q9H1C7 97 aa11.98□□□□□ -0.49
PTPN6-204ENST00000456013 APOC4P55056 127 aa11.98□□□□□ -0.49
PTPN6-204ENST00000456013 SPATA3Q8NHX4 192 aa11.98□□□□□ -0.49
PTPN6-204ENST00000456013 LELP1Q5T871 98 aa11.97□□□□□ -0.49
PTPN6-204ENST00000456013 UBL5Q9BZL1 73 aa11.97□□□□□ -0.49
PTPN6-204ENST00000456013 CELA1Q9UNI1 258 aa11.97□□□□□ -0.49
PTPN6-204ENST00000456013 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
PTPN6-204ENST00000456013 CYSRT1A8MQ03 144 aa11.97□□□□□ -0.49
PTPN6-204ENST00000456013 ZNF561-AS1K7EIQ3 104 aa11.97□□□□□ -0.49
PTPN6-204ENST00000456013 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms