RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PF4P02776 101 aa9.94□□□□□ -0.82
ERCC3-203ENST00000445889 NOTCH2Q04721 2471 aa9.93□□□□□ -0.82
ERCC3-203ENST00000445889 TMEM126AQ9H061 195 aa9.93□□□□□ -0.82
ERCC3-203ENST00000445889 LINC00846Q9NV44 126 aa9.93□□□□□ -0.82
ERCC3-203ENST00000445889 ITPR2Q14571 2701 aa9.93□□□□□ -0.82
ERCC3-203ENST00000445889 FHL2Q14192 279 aa9.93□□□□□ -0.82
ERCC3-203ENST00000445889 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
ERCC3-203ENST00000445889 UQCRQO14949 82 aa9.92□□□□□ -0.82
ERCC3-203ENST00000445889 RNASE1P07998 156 aaKnown RBP9.92□□□□□ -0.82
ERCC3-203ENST00000445889 LRRC75A-AS1Q8N1F1 130 aa9.92□□□□□ -0.82
ERCC3-203ENST00000445889 Q8N3U1 123 aa9.92□□□□□ -0.82
ERCC3-203ENST00000445889 IGLV10-54A0A075B6I4 117 aa9.91□□□□□ -0.82
ERCC3-203ENST00000445889 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
ERCC3-203ENST00000445889 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
ERCC3-203ENST00000445889 DEFB4AO15263 64 aa9.9□□□□□ -0.82
ERCC3-203ENST00000445889 TRAV25A0A0B4J276 109 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 LINC00959A0A1B0GUT2 108 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 LINC00526Q96FQ7 95 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 hADV29S1A0JD25 119 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 CXCL5P42830 114 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-203ENST00000445889 GYPEP15421 78 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 KRTAP1-3Q8IUG1 177 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 LINC01006Q8NI28 216 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 CYSTM1Q9H1C7 97 aa9.89□□□□□ -0.83
ERCC3-203ENST00000445889 A0A087WZ39 114 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 IBA57-AS1B1ANH7 110 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 H0YGX0 51 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 COX7CP15954 63 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 A0A1B0GX51 115 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 WFDC9Q8NEX5 89 aa9.88□□□□□ -0.83
ERCC3-203ENST00000445889 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
ERCC3-203ENST00000445889 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
ERCC3-203ENST00000445889 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
ERCC3-203ENST00000445889 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
ERCC3-203ENST00000445889 TENM4Q6N022 2769 aa9.84□□□□□ -0.83
ERCC3-203ENST00000445889 ATOX1O00244 68 aa9.84□□□□□ -0.83
ERCC3-203ENST00000445889 ORMDL1Q9P0S3 153 aa9.84□□□□□ -0.83
ERCC3-203ENST00000445889 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
ERCC3-203ENST00000445889 LINC00269Q8N2A0 174 aa9.83□□□□□ -0.84
ERCC3-203ENST00000445889 IGLV1-51P01701 117 aa9.83□□□□□ -0.84
ERCC3-203ENST00000445889 SS18Q15532 418 aa9.83□□□□□ -0.84
ERCC3-203ENST00000445889 LINC01561Q8N1V8 128 aa9.83□□□□□ -0.84
ERCC3-203ENST00000445889 HILS1P60008 231 aa9.82□□□□□ -0.84
ERCC3-203ENST00000445889 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
ERCC3-203ENST00000445889 OBSCN-AS1Q96MR7 158 aa9.82□□□□□ -0.84
ERCC3-203ENST00000445889 TMEM86BQ8N661 226 aa9.81□□□□□ -0.84
ERCC3-203ENST00000445889 Q8NDZ9 215 aa9.81□□□□□ -0.84
ERCC3-203ENST00000445889 ZNF843Q8N446 348 aa9.81□□□□□ -0.84
ERCC3-203ENST00000445889 ANK3Q12955 4377 aaKnown RBP9.8□□□□□ -0.84
ERCC3-203ENST00000445889 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
ERCC3-203ENST00000445889 SPATA3Q8NHX4 192 aa9.8□□□□□ -0.84
ERCC3-203ENST00000445889 USP17L23D6RBM5 183 aa9.79□□□□□ -0.84
ERCC3-203ENST00000445889 Q6JHZ5 121 aa9.79□□□□□ -0.84
ERCC3-203ENST00000445889 CRYGAP11844 174 aa9.79□□□□□ -0.84
ERCC3-203ENST00000445889 KIR2DL5BQ8NHK3 375 aa9.79□□□□□ -0.84
ERCC3-203ENST00000445889 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
ERCC3-203ENST00000445889 ANGP03950 147 aaKnown RBP9.78□□□□□ -0.84
ERCC3-203ENST00000445889 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
ERCC3-203ENST00000445889 C6orf223Q8N319 242 aa9.78□□□□□ -0.84
ERCC3-203ENST00000445889 CCKP06307 115 aa9.77□□□□□ -0.84
ERCC3-203ENST00000445889 Q8N814 137 aa9.77□□□□□ -0.84
ERCC3-203ENST00000445889 SMR3AQ99954 134 aa9.77□□□□□ -0.84
ERCC3-203ENST00000445889 C6orf99Q4VX62 202 aa9.77□□□□□ -0.85
ERCC3-203ENST00000445889 TENM1Q9UKZ4 2725 aa9.77□□□□□ -0.85
ERCC3-203ENST00000445889 TRAV23DV6A0A075B6W5 121 aa9.76□□□□□ -0.85
ERCC3-203ENST00000445889 LY6G6DO95868 133 aa9.76□□□□□ -0.85
ERCC3-203ENST00000445889 FAM19A1Q7Z5A9 133 aa9.76□□□□□ -0.85
ERCC3-203ENST00000445889 PDZD2O15018 2839 aa9.76□□□□□ -0.85
ERCC3-203ENST00000445889 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
ERCC3-203ENST00000445889 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
ERCC3-203ENST00000445889 Q8IZM0 81 aa9.76□□□□□ -0.85
ERCC3-203ENST00000445889 HTN3P15516 51 aa9.75□□□□□ -0.85
ERCC3-203ENST00000445889 C10orf25Q5T742 122 aa9.75□□□□□ -0.85
ERCC3-203ENST00000445889 ENHOQ6UWT2 76 aa9.75□□□□□ -0.85
ERCC3-203ENST00000445889 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
ERCC3-203ENST00000445889 J3KT08 172 aa9.74□□□□□ -0.85
ERCC3-203ENST00000445889 DEFB135Q30KP9 77 aa9.74□□□□□ -0.85
ERCC3-203ENST00000445889 DSCR8Q96T75 97 aa9.74□□□□□ -0.85
ERCC3-203ENST00000445889 KIAA0087Q14695 138 aa9.73□□□□□ -0.85
ERCC3-203ENST00000445889 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
ERCC3-203ENST00000445889 UNQ6190/PRO20217Q6UXQ8 127 aa9.73□□□□□ -0.85
ERCC3-203ENST00000445889 PRO0255Q9UI72 69 aa9.73□□□□□ -0.85
ERCC3-203ENST00000445889 X6R8D5 127 aa9.73□□□□□ -0.85
ERCC3-203ENST00000445889 M0R2N4 97 aa9.72□□□□□ -0.85
ERCC3-203ENST00000445889 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
ERCC3-203ENST00000445889 TMEM256-PLSCR3K7ERE1 68 aa9.72□□□□□ -0.85
ERCC3-203ENST00000445889 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
ERCC3-203ENST00000445889 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
ERCC3-203ENST00000445889 REG3AQ06141 175 aa9.72□□□□□ -0.85
ERCC3-203ENST00000445889 UPK3BQ9BT76 320 aa9.71□□□□□ -0.85
ERCC3-203ENST00000445889 ATRQ13535 2644 aa9.71□□□□□ -0.86
ERCC3-203ENST00000445889 JMJD7-PLA2G4BH0Y9G9 81 aa9.71□□□□□ -0.86
ERCC3-203ENST00000445889 GHRHP01286 108 aa9.71□□□□□ -0.86
ERCC3-203ENST00000445889 A0A1B0GUV1 79 aa9.7□□□□□ -0.86
ERCC3-203ENST00000445889 KRTAP1-1Q07627 177 aa9.7□□□□□ -0.86
ERCC3-203ENST00000445889 HECTD1Q9ULT8 2610 aa9.7□□□□□ -0.86
ERCC3-203ENST00000445889 PKD1L1Q8TDX9 2849 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms