RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 DPH3P1Q9H4G8 78 aa4.33□□□□□ -1.72
ECHDC1-208ENST00000436638 HHLA3Q9XRX5 114 aa4.33□□□□□ -1.72
ECHDC1-208ENST00000436638 DNAH3Q8TD57 4116 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 A8MUN3 132 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 IGLL5B9A064 214 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 TMEM256-PLSCR3K7ERE1 68 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 M0R378 163 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 COX8AP10176 69 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 HBBP68871 147 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 TWIST1Q15672 202 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 FAM74A4Q5TZK3 123 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 CFAP126Q5VTH2 177 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 TSKUQ8WUA8 353 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 PGLYRP4Q96LB8 373 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 TIMM17AQ99595 171 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 V9GYV3 84 aa4.32□□□□□ -1.72
ECHDC1-208ENST00000436638 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 hADV29S1A0JD25 119 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 HIGD1CA8MV81 97 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 COX7A2LO14548 114 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 POM121L12Q8N7R1 296 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 RNF185Q96GF1 192 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 PRO0255Q9UI72 69 aa4.31□□□□□ -1.72
ECHDC1-208ENST00000436638 IGHV4-4A0A075B6R2 117 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 A0A0J9YY99 117 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 A0A1B0GUT8 65 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 PSPHP1O15172 72 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 NUPR1O60356 82 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 MGPP08493 103 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 SCGB1C2P0DMR2 95 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 ZNF56Q15929 161 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 ZFP2Q6ZN57 461 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 C14orf178Q8N769 122 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-208ENST00000436638 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 SMIM27A0A1W2PRY6 76 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 H3BNG1 76 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 NXPH4O95158 308 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 HBDP02042 147 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 UBE2BP63146 152 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 RHOHQ15669 191 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 CASC10Q5T4H9 136 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 C2orf91Q6ZV80 131 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 LINC00337Q8N6G1 96 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 ICOSQ9Y6W8 199 aa4.29□□□□□ -1.72
ECHDC1-208ENST00000436638 FBN3Q75N90 2809 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 K7EQD1 137 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 LINC00313P59037 77 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 FP248Q71RG6 208 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 PHF5AQ7RTV0 110 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 UBE2DNLQ8IWF7 75 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 C6orf223Q8N319 242 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 SERP2Q8N6R1 65 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 VSIG2Q96IQ7 327 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 NXT2Q9NPJ8 142 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 MSRB1Q9NZV6 116 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 DNAH9Q9NYC9 4486 aa4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 HUWE1Q7Z6Z7 4374 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-208ENST00000436638 NBEAL1Q6ZS30 2694 aa4.28□□□□□ -1.73
ECHDC1-208ENST00000436638 A0A0J9YXV3 536 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 TRBV10-1A0A0K0K1A3 114 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 K7ERJ3 54 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 CXCL6P80162 114 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 C5orf38Q86SI9 138 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 SLC25A29Q8N8R3 303 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 APLNQ9ULZ1 77 aa4.27□□□□□ -1.73
ECHDC1-208ENST00000436638 MUC4Q99102 2169 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 A0A096LPF7 62 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 TIMM17BO60830 172 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 APCSP02743 223 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 ACYP1P07311 99 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 CCL18P55774 89 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 HERVK_113P61574 105 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
ECHDC1-208ENST00000436638 LY6G6CO95867 125 aa4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 INAFM2P0DMQ5 153 aa4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 C7orf65Q6ZTY9 151 aa4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 HIST1H4GQ99525 98 aa4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 UPK3BQ9BT76 320 aa4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 KIF25-AS1Q9Y6Z4 181 aa4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 PRKDCP78527 4128 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-208ENST00000436638 TRBV7-3A0A075B6L6 115 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 IGHV6-1A0A0B4J1U7 121 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms