RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 CFAP161Q6P656 301 aa7.11□□□□□ -1.27
HDAC9-210ENST00000428307 F8W1H4 67 aa7.1□□□□□ -1.27
HDAC9-210ENST00000428307 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
HDAC9-210ENST00000428307 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
HDAC9-210ENST00000428307 MIR7-3HGQ8N6C7 128 aa7.1□□□□□ -1.27
HDAC9-210ENST00000428307 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 K7EIL1 84 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 COX7A2LO14548 114 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 MALP21145 153 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 DNAH3Q8TD57 4116 aa7.09□□□□□ -1.27
HDAC9-210ENST00000428307 TRIAP1O43715 76 aa7.09□□□□□ -1.28
HDAC9-210ENST00000428307 ETDBQ3ZM63 59 aa7.09□□□□□ -1.28
HDAC9-210ENST00000428307 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.28
HDAC9-210ENST00000428307 MDFIQ99750 246 aa7.09□□□□□ -1.28
HDAC9-210ENST00000428307 PRO0461Q9UI25 63 aa7.09□□□□□ -1.28
HDAC9-210ENST00000428307 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
HDAC9-210ENST00000428307 TRBV20-1A0A075B6N2 111 aa7.08□□□□□ -1.28
HDAC9-210ENST00000428307 H3BNG1 76 aa7.08□□□□□ -1.28
HDAC9-210ENST00000428307 CKS1BP61024 79 aa7.07□□□□□ -1.28
HDAC9-210ENST00000428307 ESRGQ1W209 222 aa7.07□□□□□ -1.28
HDAC9-210ENST00000428307 ENHOQ6UWT2 76 aa7.07□□□□□ -1.28
HDAC9-210ENST00000428307 Q8IZM0 81 aa7.07□□□□□ -1.28
HDAC9-210ENST00000428307 COPS9Q8WXC6 57 aa7.07□□□□□ -1.28
HDAC9-210ENST00000428307 UBE2WQ96B02 151 aa7.07□□□□□ -1.28
HDAC9-210ENST00000428307 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 IBA57-AS1B1ANH7 110 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 K7ERU9 68 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 FOXI1Q12951 378 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 TRBV30A0A0K0K1B3 111 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 SMCPP49901 116 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-210ENST00000428307 LINC00526Q96FQ7 95 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 PRR34Q9NV39 138 aa7.06□□□□□ -1.28
HDAC9-210ENST00000428307 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
HDAC9-210ENST00000428307 CRPP02741 224 aa7.05□□□□□ -1.28
HDAC9-210ENST00000428307 CCL18P55774 89 aa7.05□□□□□ -1.28
HDAC9-210ENST00000428307 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
HDAC9-210ENST00000428307 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
HDAC9-210ENST00000428307 COX6CP09669 75 aa7.04□□□□□ -1.28
HDAC9-210ENST00000428307 C9orf116Q5BN46 136 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-210ENST00000428307 LINC01561Q8N1V8 128 aa7.04□□□□□ -1.28
HDAC9-210ENST00000428307 C6orf223Q8N319 242 aa7.04□□□□□ -1.28
HDAC9-210ENST00000428307 CLEC2BQ92478 149 aa7.04□□□□□ -1.28
HDAC9-210ENST00000428307 C9JAW5 83 aa7.03□□□□□ -1.28
HDAC9-210ENST00000428307 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
HDAC9-210ENST00000428307 IGKV2-28A0A075B6P5 120 aa7.02□□□□□ -1.29
HDAC9-210ENST00000428307 IGKV2D-28P01615 120 aa7.02□□□□□ -1.29
HDAC9-210ENST00000428307 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
HDAC9-210ENST00000428307 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
HDAC9-210ENST00000428307 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
HDAC9-210ENST00000428307 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
HDAC9-210ENST00000428307 UNQ6190/PRO20217Q6UXQ8 127 aa7.01□□□□□ -1.29
HDAC9-210ENST00000428307 SLC25A20O43772 301 aa7.01□□□□□ -1.29
HDAC9-210ENST00000428307 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
HDAC9-210ENST00000428307 KLK5Q9Y337 293 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-210ENST00000428307 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
HDAC9-210ENST00000428307 TRAV10A0A0B4J240 114 aa7□□□□□ -1.29
HDAC9-210ENST00000428307 TRAV8-4A0A0B4J246 113 aa7□□□□□ -1.29
HDAC9-210ENST00000428307 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
HDAC9-210ENST00000428307 CXCL5P42830 114 aa7□□□□□ -1.29
HDAC9-210ENST00000428307 PRR3P79522 188 aaKnown RBP7□□□□□ -1.29
HDAC9-210ENST00000428307 PPDPFQ9H3Y8 114 aa6.99□□□□□ -1.29
HDAC9-210ENST00000428307 OR13C6PQ8NH95 151 aa6.98□□□□□ -1.29
HDAC9-210ENST00000428307 LST1O00453 97 aa6.98□□□□□ -1.29
HDAC9-210ENST00000428307 HIGD2BQ4VC39 106 aa6.98□□□□□ -1.29
HDAC9-210ENST00000428307 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
HDAC9-210ENST00000428307 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
HDAC9-210ENST00000428307 COX17Q14061 63 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 ANKRD29Q8N6D5 301 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 Q9HAA7 133 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 HUWE1Q7Z6Z7 4374 aaKnown RBP6.97□□□□□ -1.29
HDAC9-210ENST00000428307 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 C21orf62-AS1Q17RA5 79 aa6.97□□□□□ -1.29
HDAC9-210ENST00000428307 SMIM11BQ8TCY0 68 aa6.96□□□□□ -1.29
HDAC9-210ENST00000428307 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.29
HDAC9-210ENST00000428307 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.29
HDAC9-210ENST00000428307 TRBV10-2A0A0K0K1G8 114 aa6.96□□□□□ -1.3
HDAC9-210ENST00000428307 J3QR89 54 aa6.96□□□□□ -1.3
HDAC9-210ENST00000428307 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.3
HDAC9-210ENST00000428307 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
HDAC9-210ENST00000428307 C15orf53Q8NAA6 179 aa6.96□□□□□ -1.3
HDAC9-210ENST00000428307 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
HDAC9-210ENST00000428307 RPL28P46779 137 aaKnown RBP6.95□□□□□ -1.3
HDAC9-210ENST00000428307 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-210ENST00000428307 FAM218AQ96MZ4 157 aa6.95□□□□□ -1.3
HDAC9-210ENST00000428307 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
HDAC9-210ENST00000428307 Q8NDZ9 215 aa6.94□□□□□ -1.3
HDAC9-210ENST00000428307 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
HDAC9-210ENST00000428307 DNAH10OSP0CZ25 163 aa6.94□□□□□ -1.3
HDAC9-210ENST00000428307 PPDPFLQ8WWR9 84 aa6.94□□□□□ -1.3
HDAC9-210ENST00000428307 CAMK2N2Q96S95 79 aa6.93□□□□□ -1.3
HDAC9-210ENST00000428307 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
HDAC9-210ENST00000428307 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
HDAC9-210ENST00000428307 XAGE1AQ9HD64 81 aa6.93□□□□□ -1.3
HDAC9-210ENST00000428307 NCR3O14931 201 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms