RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
GPC1-205ENST00000427506 FA2HQ7L5A8 372 aa11.37□□□□□ -0.59
GPC1-205ENST00000427506 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
GPC1-205ENST00000427506 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
GPC1-205ENST00000427506 CARHSP1Q9Y2V2 147 aaKnown RBP11.37□□□□□ -0.59
GPC1-205ENST00000427506 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
GPC1-205ENST00000427506 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
GPC1-205ENST00000427506 Q8IZM0 81 aa11.36□□□□□ -0.59
GPC1-205ENST00000427506 LINC01546A6NGU7 62 aa11.34□□□□□ -0.59
GPC1-205ENST00000427506 LINC00469Q8N7U9 141 aa11.34□□□□□ -0.59
GPC1-205ENST00000427506 M0QXV9 152 aa11.32□□□□□ -0.6
GPC1-205ENST00000427506 TINCRA0A1B0GVN0 87 aa11.31□□□□□ -0.6
GPC1-205ENST00000427506 UBE2BP63146 152 aa11.31□□□□□ -0.6
GPC1-205ENST00000427506 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
GPC1-205ENST00000427506 F8VRH5 84 aa11.3□□□□□ -0.6
GPC1-205ENST00000427506 APOC3P02656 99 aa11.3□□□□□ -0.6
GPC1-205ENST00000427506 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
GPC1-205ENST00000427506 TRAPPC1Q9Y5R8 145 aa11.3□□□□□ -0.6
GPC1-205ENST00000427506 IGLV7-43P04211 117 aa11.29□□□□□ -0.6
GPC1-205ENST00000427506 CXCL5P42830 114 aa11.29□□□□□ -0.6
GPC1-205ENST00000427506 PMVKQ15126 192 aa11.29□□□□□ -0.6
GPC1-205ENST00000427506 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
GPC1-205ENST00000427506 SMIM1B2RUZ4 78 aa11.28□□□□□ -0.6
GPC1-205ENST00000427506 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
GPC1-205ENST00000427506 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
GPC1-205ENST00000427506 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
GPC1-205ENST00000427506 KRTAP10-8P60410 259 aa11.27□□□□□ -0.61
GPC1-205ENST00000427506 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
GPC1-205ENST00000427506 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
GPC1-205ENST00000427506 SNAPINO95295 136 aa11.26□□□□□ -0.61
GPC1-205ENST00000427506 NDUFA6P56556 154 aa11.26□□□□□ -0.61
GPC1-205ENST00000427506 SVBPQ8N300 66 aa11.26□□□□□ -0.61
GPC1-205ENST00000427506 DIRC1Q969H9 104 aa11.26□□□□□ -0.61
GPC1-205ENST00000427506 XAGE1AQ9HD64 81 aa11.26□□□□□ -0.61
GPC1-205ENST00000427506 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
GPC1-205ENST00000427506 LINC00614P0C842 121 aa11.25□□□□□ -0.61
GPC1-205ENST00000427506 C18orf32Q8TCD1 76 aa11.25□□□□□ -0.61
GPC1-205ENST00000427506 H3BRM9 83 aa11.24□□□□□ -0.61
GPC1-205ENST00000427506 ODF1Q14990 250 aa11.24□□□□□ -0.61
GPC1-205ENST00000427506 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
GPC1-205ENST00000427506 HMCN2Q8NDA2 5059 aa11.22□□□□□ -0.61
GPC1-205ENST00000427506 A0A096LNJ9 63 aa11.21□□□□□ -0.61
GPC1-205ENST00000427506 HBDP02042 147 aa11.21□□□□□ -0.61
GPC1-205ENST00000427506 RAB5BP61020 215 aa11.21□□□□□ -0.61
GPC1-205ENST00000427506 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
GPC1-205ENST00000427506 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
GPC1-205ENST00000427506 URB1-AS1Q96HZ7 61 aa11.21□□□□□ -0.61
GPC1-205ENST00000427506 H0Y9J4 135 aa11.2□□□□□ -0.62
GPC1-205ENST00000427506 IGLC3P0DOY3 106 aa11.19□□□□□ -0.62
GPC1-205ENST00000427506 ATP5LO75964 103 aa11.18□□□□□ -0.62
GPC1-205ENST00000427506 TNXBP22105 4242 aa11.16□□□□□ -0.62
GPC1-205ENST00000427506 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
GPC1-205ENST00000427506 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
GPC1-205ENST00000427506 NUPR1O60356 82 aa11.15□□□□□ -0.62
GPC1-205ENST00000427506 ZNF22P17026 224 aaPredicted RBP11.15□□□□□ -0.62
GPC1-205ENST00000427506 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
GPC1-205ENST00000427506 PRR26Q8N8Z3 221 aa11.15□□□□□ -0.62
GPC1-205ENST00000427506 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
GPC1-205ENST00000427506 PFN2P35080 140 aa11.13□□□□□ -0.63
GPC1-205ENST00000427506 TMEM170BQ5T4T1 132 aa11.13□□□□□ -0.63
GPC1-205ENST00000427506 ZNF861PO60384 105 aa11.12□□□□□ -0.63
GPC1-205ENST00000427506 YPEL4Q96NS1 127 aa11.12□□□□□ -0.63
GPC1-205ENST00000427506 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
GPC1-205ENST00000427506 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
GPC1-205ENST00000427506 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
GPC1-205ENST00000427506 NKAPP1Q8N9T2 125 aa11.11□□□□□ -0.63
GPC1-205ENST00000427506 LINC00167Q96N53 147 aa11.11□□□□□ -0.63
GPC1-205ENST00000427506 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
GPC1-205ENST00000427506 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
GPC1-205ENST00000427506 IGLV1-50A0A075B6I6 118 aa11.09□□□□□ -0.63
GPC1-205ENST00000427506 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
GPC1-205ENST00000427506 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
GPC1-205ENST00000427506 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
GPC1-205ENST00000427506 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
GPC1-205ENST00000427506 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
GPC1-205ENST00000427506 BCE1O60756 84 aa11.07□□□□□ -0.64
GPC1-205ENST00000427506 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
GPC1-205ENST00000427506 IFI27L1Q96BM0 104 aa11.07□□□□□ -0.64
GPC1-205ENST00000427506 HSBP1O75506 76 aa11.05□□□□□ -0.64
GPC1-205ENST00000427506 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
GPC1-205ENST00000427506 COX17Q14061 63 aa11.05□□□□□ -0.64
GPC1-205ENST00000427506 SFTA2Q6UW10 78 aa11.05□□□□□ -0.64
GPC1-205ENST00000427506 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
GPC1-205ENST00000427506 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
GPC1-205ENST00000427506 SCO1O75880 301 aa11.03□□□□□ -0.64
GPC1-205ENST00000427506 IGKV2-28A0A075B6P5 120 aa11.02□□□□□ -0.65
GPC1-205ENST00000427506 IGKV2D-28P01615 120 aa11.02□□□□□ -0.65
GPC1-205ENST00000427506 UBE2AP49459 152 aa11.02□□□□□ -0.65
GPC1-205ENST00000427506 RPL24P83731 157 aaKnown RBP11.02□□□□□ -0.65
GPC1-205ENST00000427506 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
GPC1-205ENST00000427506 TMEM223A0PJW6 202 aa11.01□□□□□ -0.65
GPC1-205ENST00000427506 TRGC2P03986 189 aa11.01□□□□□ -0.65
GPC1-205ENST00000427506 LINC00158P58513 81 aa11.01□□□□□ -0.65
GPC1-205ENST00000427506 UBR4Q5T4S7 5183 aa11.01□□□□□ -0.65
GPC1-205ENST00000427506 VPREB1P12018 145 aa11□□□□□ -0.65
GPC1-205ENST00000427506 H0Y8G0 127 aa10.99□□□□□ -0.65
GPC1-205ENST00000427506 SLC7A5P1Q8MH63 180 aa10.99□□□□□ -0.65
GPC1-205ENST00000427506 A0A0U1RRA0 63 aa10.98□□□□□ -0.65
GPC1-205ENST00000427506 ATP6V1G1O75348 118 aa10.97□□□□□ -0.65
GPC1-205ENST00000427506 SERF1AO75920 110 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms