RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 RPL32P62910 135 aaKnown RBP4.24□□□□□ -1.73
COPS3-202ENST00000417352 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
COPS3-202ENST00000417352 LINC00242Q5T6M2 205 aa4.24□□□□□ -1.73
COPS3-202ENST00000417352 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
COPS3-202ENST00000417352 MAP1LC3AQ9H492 121 aa4.24□□□□□ -1.73
COPS3-202ENST00000417352 SMDT1Q9H4I9 107 aa4.24□□□□□ -1.73
COPS3-202ENST00000417352 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 IGLV4-3A0A075B6K6 122 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 TSPAN13O95857 204 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 FAM104AQ969W3 186 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 ALKBH7Q9BT30 221 aaPredicted RBP4.23□□□□□ -1.73
COPS3-202ENST00000417352 CYSLTR1Q9Y271 337 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
COPS3-202ENST00000417352 TRBV30A0A0K0K1B3 111 aa4.22□□□□□ -1.73
COPS3-202ENST00000417352 A0A1B0GVG6 124 aa4.22□□□□□ -1.73
COPS3-202ENST00000417352 NDUFC2-KCTD14E9PQ53 114 aa4.22□□□□□ -1.73
COPS3-202ENST00000417352 TLX1NBP0CAT3 122 aa4.22□□□□□ -1.73
COPS3-202ENST00000417352 C2orf66Q6UXQ4 117 aa4.22□□□□□ -1.73
COPS3-202ENST00000417352 GEMIN7Q9H840 131 aaKnown RBP4.22□□□□□ -1.73
COPS3-202ENST00000417352 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
COPS3-202ENST00000417352 IGLV1-50A0A075B6I6 118 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 A0A1B0GXF2 115 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 MT-ND4LP03901 98 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 KIAA0087Q14695 138 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 ORMDL2Q53FV1 153 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 C9orf129Q5T035 196 aaKnown RBP4.21□□□□□ -1.74
COPS3-202ENST00000417352 ATP5L2Q7Z4Y8 100 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 Q8N8P6 123 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 CTDSP1Q9GZU7 261 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
COPS3-202ENST00000417352 RPL37AP8A6NKH3 93 aa4.2□□□□□ -1.74
COPS3-202ENST00000417352 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
COPS3-202ENST00000417352 RAB5BP61020 215 aa4.2□□□□□ -1.74
COPS3-202ENST00000417352 RAB14P61106 215 aa4.2□□□□□ -1.74
COPS3-202ENST00000417352 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
COPS3-202ENST00000417352 LBHQ53QV2 105 aaPredicted RBP4.2□□□□□ -1.74
COPS3-202ENST00000417352 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
COPS3-202ENST00000417352 GAGE10A6NGK3 116 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 HERVK_113P63121 156 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 SCGB3A1Q96QR1 104 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 CDKN2A-AS1Q9UH64 79 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 LAMTOR2Q9Y2Q5 125 aa4.19□□□□□ -1.74
COPS3-202ENST00000417352 F8VRH5 84 aa4.18□□□□□ -1.74
COPS3-202ENST00000417352 ZNF861PO60384 105 aa4.18□□□□□ -1.74
COPS3-202ENST00000417352 G0S2P27469 103 aa4.18□□□□□ -1.74
COPS3-202ENST00000417352 SEC11AP67812 179 aa4.18□□□□□ -1.74
COPS3-202ENST00000417352 KIAA1644Q3SXP7 199 aa4.18□□□□□ -1.74
COPS3-202ENST00000417352 MRPL55Q7Z7F7 128 aaKnown RBP4.18□□□□□ -1.74
COPS3-202ENST00000417352 NXT2Q9NPJ8 142 aaKnown RBP4.18□□□□□ -1.74
COPS3-202ENST00000417352 LRP2P98164 4655 aa4.18□□□□□ -1.74
COPS3-202ENST00000417352 RPL28P46779 137 aaKnown RBP4.17□□□□□ -1.74
COPS3-202ENST00000417352 UBE2AP49459 152 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 NDUFA6P56556 154 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 PNRC1Q12796 327 aaPredicted RBP4.17□□□□□ -1.74
COPS3-202ENST00000417352 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 Q8IZM0 81 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 NKAPP1Q8N9T2 125 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 AMELXQ99217 191 aa4.17□□□□□ -1.74
COPS3-202ENST00000417352 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 PRSS47A8MTI9 375 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 NUPR1O60356 82 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 CRYGAP11844 174 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 TYMSOSQ8TAI1 123 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 COX7B2Q8TF08 81 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
COPS3-202ENST00000417352 K7EMI3 77 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 SPINK8P0C7L1 97 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 ADCYAP1P18509 176 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 PFN2P35080 140 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 ERASQ7Z444 233 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 TOMM6Q96B49 74 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 LINC00167Q96N53 147 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 SMCO4Q9NRQ5 59 aa4.15□□□□□ -1.75
COPS3-202ENST00000417352 CARHSP1Q9Y2V2 147 aaKnown RBP4.15□□□□□ -1.75
COPS3-202ENST00000417352 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 BCE1O60756 84 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 ATP5LO75964 103 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 NPSP0C0P6 89 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 S100PP25815 95 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 CXCL5P42830 114 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 TIMM17AQ99595 171 aa4.14□□□□□ -1.75
COPS3-202ENST00000417352 TNXBP22105 4242 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 A0A0U1RQV1 116 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 B5MCH6 92 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 H3BRM9 83 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 SCO1O75880 301 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 FA2HQ7L5A8 372 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 CST9LQ9H4G1 147 aa4.13□□□□□ -1.75
COPS3-202ENST00000417352 A0A087X002 238 aa4.12□□□□□ -1.75
COPS3-202ENST00000417352 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
COPS3-202ENST00000417352 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms