RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
SEMA3F-202ENST00000413852 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
SEMA3F-202ENST00000413852 IMUPQ9GZP8 106 aa10.16□□□□□ -0.78
SEMA3F-202ENST00000413852 INAFM2P0DMQ5 153 aa10.16□□□□□ -0.78
SEMA3F-202ENST00000413852 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
SEMA3F-202ENST00000413852 A0A1B0GX51 115 aa10.16□□□□□ -0.78
SEMA3F-202ENST00000413852 KIR2DL5BQ8NHK3 375 aa10.16□□□□□ -0.78
SEMA3F-202ENST00000413852 TRBV6-8A0A0A6YYG3 113 aa10.15□□□□□ -0.78
SEMA3F-202ENST00000413852 UQCRQO14949 82 aa10.15□□□□□ -0.78
SEMA3F-202ENST00000413852 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
SEMA3F-202ENST00000413852 HIST1H4AP62805 103 aaKnown RBP10.14□□□□□ -0.79
SEMA3F-202ENST00000413852 FHL2Q14192 279 aa10.14□□□□□ -0.79
SEMA3F-202ENST00000413852 SS18Q15532 418 aa10.14□□□□□ -0.79
SEMA3F-202ENST00000413852 LINC00526Q96FQ7 95 aa10.14□□□□□ -0.79
SEMA3F-202ENST00000413852 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
SEMA3F-202ENST00000413852 DNAJC9-AS1A6NH13 148 aa10.13□□□□□ -0.79
SEMA3F-202ENST00000413852 DEFB4AO15263 64 aa10.13□□□□□ -0.79
SEMA3F-202ENST00000413852 COX7CP15954 63 aa10.13□□□□□ -0.79
SEMA3F-202ENST00000413852 UBR5O95071 2799 aaPredicted RBP10.13□□□□□ -0.79
SEMA3F-202ENST00000413852 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
SEMA3F-202ENST00000413852 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
SEMA3F-202ENST00000413852 Q8NDZ9 215 aa10.11□□□□□ -0.79
SEMA3F-202ENST00000413852 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
SEMA3F-202ENST00000413852 A0A087WZ39 114 aa10.11□□□□□ -0.79
SEMA3F-202ENST00000413852 ITPR2Q14571 2701 aa10.1□□□□□ -0.79
SEMA3F-202ENST00000413852 WFDC11Q8NEX6 87 aa10.1□□□□□ -0.79
SEMA3F-202ENST00000413852 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
SEMA3F-202ENST00000413852 PF4P02776 101 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 GYPEP15421 78 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 C16orf74Q96GX8 76 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 HIVEP2P31629 2446 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 TRBV6-4A0A1B0GX49 114 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 NANOS2P60321 138 aaKnown RBP10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
SEMA3F-202ENST00000413852 RPL18AQ02543 176 aaKnown RBP10.08□□□□□ -0.8
SEMA3F-202ENST00000413852 DSCR8Q96T75 97 aa10.08□□□□□ -0.8
SEMA3F-202ENST00000413852 C19orf73Q9NVV2 129 aa10.08□□□□□ -0.8
SEMA3F-202ENST00000413852 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
SEMA3F-202ENST00000413852 H0YGX0 51 aa10.07□□□□□ -0.8
SEMA3F-202ENST00000413852 DEFB113Q30KQ7 82 aa10.07□□□□□ -0.8
SEMA3F-202ENST00000413852 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
SEMA3F-202ENST00000413852 USP17L23D6RBM5 183 aa10.06□□□□□ -0.8
SEMA3F-202ENST00000413852 M0R2N4 97 aa10.06□□□□□ -0.8
SEMA3F-202ENST00000413852 ORMDL1Q9P0S3 153 aa10.06□□□□□ -0.8
SEMA3F-202ENST00000413852 TENM4Q6N022 2769 aa10.06□□□□□ -0.8
SEMA3F-202ENST00000413852 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
SEMA3F-202ENST00000413852 OBSCN-AS1Q96MR7 158 aa10.05□□□□□ -0.8
SEMA3F-202ENST00000413852 ANK3Q12955 4377 aaKnown RBP10.05□□□□□ -0.8
SEMA3F-202ENST00000413852 ATOX1O00244 68 aa10.05□□□□□ -0.8
SEMA3F-202ENST00000413852 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
SEMA3F-202ENST00000413852 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
SEMA3F-202ENST00000413852 OXTP01178 125 aa10.04□□□□□ -0.8
SEMA3F-202ENST00000413852 KRTAP1-3Q8IUG1 177 aa10.04□□□□□ -0.8
SEMA3F-202ENST00000413852 TRAV25A0A0B4J276 109 aa10.04□□□□□ -0.8
SEMA3F-202ENST00000413852 Q6JHZ5 121 aa10.03□□□□□ -0.8
SEMA3F-202ENST00000413852 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
SEMA3F-202ENST00000413852 C6orf99Q4VX62 202 aa10.03□□□□□ -0.8
SEMA3F-202ENST00000413852 CRYGAP11844 174 aa10.02□□□□□ -0.81
SEMA3F-202ENST00000413852 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.81
SEMA3F-202ENST00000413852 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.81
SEMA3F-202ENST00000413852 Q8N814 137 aa10.02□□□□□ -0.81
SEMA3F-202ENST00000413852 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
SEMA3F-202ENST00000413852 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
SEMA3F-202ENST00000413852 TRRAPQ9Y4A5 3859 aa10.01□□□□□ -0.81
SEMA3F-202ENST00000413852 CCKP06307 115 aa10.01□□□□□ -0.81
SEMA3F-202ENST00000413852 UPK3BQ9BT76 320 aa10□□□□□ -0.81
SEMA3F-202ENST00000413852 TMEM86BQ8N661 226 aa10□□□□□ -0.81
SEMA3F-202ENST00000413852 LY6G6DO95868 133 aa9.99□□□□□ -0.81
SEMA3F-202ENST00000413852 SERP2Q8N6R1 65 aa9.99□□□□□ -0.81
SEMA3F-202ENST00000413852 IGLV1-51P01701 117 aa9.99□□□□□ -0.81
SEMA3F-202ENST00000413852 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
SEMA3F-202ENST00000413852 PKD1L1Q8TDX9 2849 aa9.99□□□□□ -0.81
SEMA3F-202ENST00000413852 NOTCH2Q04721 2471 aa9.99□□□□□ -0.81
SEMA3F-202ENST00000413852 GHRHP01286 108 aa9.98□□□□□ -0.81
SEMA3F-202ENST00000413852 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
SEMA3F-202ENST00000413852 J3KT08 172 aa9.97□□□□□ -0.81
SEMA3F-202ENST00000413852 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
SEMA3F-202ENST00000413852 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
SEMA3F-202ENST00000413852 HTN3P15516 51 aa9.96□□□□□ -0.81
SEMA3F-202ENST00000413852 Q8IZM0 81 aa9.96□□□□□ -0.82
SEMA3F-202ENST00000413852 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
SEMA3F-202ENST00000413852 PDZD2O15018 2839 aa9.96□□□□□ -0.82
SEMA3F-202ENST00000413852 S100A7L2Q5SY68 101 aa9.95□□□□□ -0.82
SEMA3F-202ENST00000413852 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
SEMA3F-202ENST00000413852 C20orf197Q8N268 126 aa9.94□□□□□ -0.82
SEMA3F-202ENST00000413852 UNC79Q9P2D8 2635 aa9.94□□□□□ -0.82
SEMA3F-202ENST00000413852 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 SMR3AQ99954 134 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 LAMTOR3Q9UHA4 124 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 HIVEP1P15822 2718 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 X6R8D5 127 aa9.93□□□□□ -0.82
SEMA3F-202ENST00000413852 HAMPP81172 84 aa9.92□□□□□ -0.82
SEMA3F-202ENST00000413852 REG3AQ06141 175 aa9.92□□□□□ -0.82
SEMA3F-202ENST00000413852 ZNF843Q8N446 348 aa9.92□□□□□ -0.82
SEMA3F-202ENST00000413852 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
SEMA3F-202ENST00000413852 SMIM9A6NGZ8 99 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms