RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DEFB131BA0A096LNP1 70 aa16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 IBA57-AS1B1ANH7 110 aa16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 RPL13AP40429 203 aaKnown RBP16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 KLK12Q9UKR0 248 aa16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 TRBV30A0A0K0K1B3 111 aa16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 MALP21145 153 aa16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 MIR7-3HGQ8N6C7 128 aa16.82■□□□□ 0.28
DNMT3A-206ENST00000406659 K7EIL1 84 aa16.81■□□□□ 0.28
DNMT3A-206ENST00000406659 DEFB121Q5J5C9 76 aa16.81■□□□□ 0.28
DNMT3A-206ENST00000406659 PRO0461Q9UI25 63 aa16.81■□□□□ 0.28
DNMT3A-206ENST00000406659 MTURNQ8N3F0 131 aa16.8■□□□□ 0.28
DNMT3A-206ENST00000406659 PRR34Q9NV39 138 aa16.79■□□□□ 0.28
DNMT3A-206ENST00000406659 K7ERU9 68 aa16.79■□□□□ 0.28
DNMT3A-206ENST00000406659 TRIAP1O43715 76 aa16.79■□□□□ 0.28
DNMT3A-206ENST00000406659 FOXI1Q12951 378 aa16.79■□□□□ 0.28
DNMT3A-206ENST00000406659 CKS1BP61024 79 aa16.78■□□□□ 0.28
DNMT3A-206ENST00000406659 CFAP161Q6P656 301 aa16.78■□□□□ 0.28
DNMT3A-206ENST00000406659 ANK2Q01484 3957 aa16.77■□□□□ 0.28
DNMT3A-206ENST00000406659 GAGE12HA6NDE8 117 aa16.77■□□□□ 0.28
DNMT3A-206ENST00000406659 PFN2P35080 140 aa16.77■□□□□ 0.28
DNMT3A-206ENST00000406659 NOTCH1P46531 2555 aa16.77■□□□□ 0.27
DNMT3A-206ENST00000406659 MRAPQ8TCY5 172 aa16.77■□□□□ 0.27
DNMT3A-206ENST00000406659 TM2D3Q9BRN9 247 aa16.77■□□□□ 0.27
DNMT3A-206ENST00000406659 COX6CP09669 75 aa16.76■□□□□ 0.27
DNMT3A-206ENST00000406659 ENHOQ6UWT2 76 aa16.76■□□□□ 0.27
DNMT3A-206ENST00000406659 C2orf82Q6UX34 121 aa16.75■□□□□ 0.27
DNMT3A-206ENST00000406659 WFDC10BQ8IUB3 73 aa16.75■□□□□ 0.27
DNMT3A-206ENST00000406659 CRPP02741 224 aa16.74■□□□□ 0.27
DNMT3A-206ENST00000406659 KIAA0087Q14695 138 aa16.74■□□□□ 0.27
DNMT3A-206ENST00000406659 TENM3Q9P273 2699 aa16.74■□□□□ 0.27
DNMT3A-206ENST00000406659 CXCL5P42830 114 aa16.74■□□□□ 0.27
DNMT3A-206ENST00000406659 ESRGQ1W209 222 aa16.74■□□□□ 0.27
DNMT3A-206ENST00000406659 ATXN8Q156A1 80 aa16.73■□□□□ 0.27
DNMT3A-206ENST00000406659 UBE2WQ96B02 151 aa16.72■□□□□ 0.27
DNMT3A-206ENST00000406659 SND1-IT1Q9HBX3 110 aa16.72■□□□□ 0.27
DNMT3A-206ENST00000406659 RNF151Q2KHN1 245 aa16.72■□□□□ 0.27
DNMT3A-206ENST00000406659 KLK5Q9Y337 293 aaPredicted RBP16.72■□□□□ 0.27
DNMT3A-206ENST00000406659 TRAV8-4A0A0B4J246 113 aa16.71■□□□□ 0.27
DNMT3A-206ENST00000406659 ETDBQ3ZM63 59 aa16.71■□□□□ 0.27
DNMT3A-206ENST00000406659 CCL18P55774 89 aa16.7■□□□□ 0.26
DNMT3A-206ENST00000406659 TRAV10A0A0B4J240 114 aa16.69■□□□□ 0.26
DNMT3A-206ENST00000406659 SMCPP49901 116 aaPredicted RBP16.69■□□□□ 0.26
DNMT3A-206ENST00000406659 TRAV13-2A0A0B4J235 113 aa16.68■□□□□ 0.26
DNMT3A-206ENST00000406659 MDFIQ99750 246 aa16.68■□□□□ 0.26
DNMT3A-206ENST00000406659 C9JAW5 83 aa16.66■□□□□ 0.26
DNMT3A-206ENST00000406659 SPAG11BQ08648 103 aa16.66■□□□□ 0.26
DNMT3A-206ENST00000406659 NBEAL1Q6ZS30 2694 aa16.65■□□□□ 0.26
DNMT3A-206ENST00000406659 COX17Q14061 63 aa16.64■□□□□ 0.25
DNMT3A-206ENST00000406659 LINC01620Q4KN68 170 aa16.64■□□□□ 0.25
DNMT3A-206ENST00000406659 C15orf53Q8NAA6 179 aa16.63■□□□□ 0.25
DNMT3A-206ENST00000406659 CLEC2BQ92478 149 aa16.63■□□□□ 0.25
DNMT3A-206ENST00000406659 IGKV2-28A0A075B6P5 120 aa16.62■□□□□ 0.25
DNMT3A-206ENST00000406659 SLC25A20O43772 301 aa16.62■□□□□ 0.25
DNMT3A-206ENST00000406659 IGKV2D-28P01615 120 aa16.62■□□□□ 0.25
DNMT3A-206ENST00000406659 LINC01556Q5JQF7 62 aa16.61■□□□□ 0.25
DNMT3A-206ENST00000406659 LINC00337Q8N6G1 96 aa16.61■□□□□ 0.25
DNMT3A-206ENST00000406659 VPS25Q9BRG1 176 aa16.61■□□□□ 0.25
DNMT3A-206ENST00000406659 C6orf223Q8N319 242 aa16.6■□□□□ 0.25
DNMT3A-206ENST00000406659 J3QR89 54 aa16.59■□□□□ 0.25
DNMT3A-206ENST00000406659 LST1O00453 97 aa16.59■□□□□ 0.25
DNMT3A-206ENST00000406659 C9orf116Q5BN46 136 aaPredicted RBP16.59■□□□□ 0.25
DNMT3A-206ENST00000406659 UNQ6190/PRO20217Q6UXQ8 127 aa16.58■□□□□ 0.24
DNMT3A-206ENST00000406659 M0QXV9 152 aa16.57■□□□□ 0.24
DNMT3A-206ENST00000406659 LINC00526Q96FQ7 95 aa16.57■□□□□ 0.24
DNMT3A-206ENST00000406659 TEN1Q86WV5 123 aa16.56■□□□□ 0.24
DNMT3A-206ENST00000406659 TRBV10-2A0A0K0K1G8 114 aa16.56■□□□□ 0.24
DNMT3A-206ENST00000406659 C10orf25Q5T742 122 aa16.56■□□□□ 0.24
DNMT3A-206ENST00000406659 MGAM2Q2M2H8 2515 aa16.55■□□□□ 0.24
DNMT3A-206ENST00000406659 ANKRD29Q8N6D5 301 aa16.55■□□□□ 0.24
DNMT3A-206ENST00000406659 CBY1Q9Y3M2 126 aa16.55■□□□□ 0.24
DNMT3A-206ENST00000406659 RPL28P46779 137 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-206ENST00000406659 KRTAP26-1Q6PEX3 210 aa16.54■□□□□ 0.24
DNMT3A-206ENST00000406659 OR13C6PQ8NH95 151 aa16.53■□□□□ 0.24
DNMT3A-206ENST00000406659 C1orf43Q9BWL3 253 aa16.53■□□□□ 0.24
DNMT3A-206ENST00000406659 DNAH10OSP0CZ25 163 aa16.52■□□□□ 0.24
DNMT3A-206ENST00000406659 NTN5Q8WTR8 489 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-206ENST00000406659 MUC7Q8TAX7 377 aa16.51■□□□□ 0.23
DNMT3A-206ENST00000406659 PPDPFLQ8WWR9 84 aa16.51■□□□□ 0.23
DNMT3A-206ENST00000406659 ZNF561-AS1K7EIQ3 104 aa16.5■□□□□ 0.23
DNMT3A-206ENST00000406659 SMIM11BQ8TCY0 68 aa16.5■□□□□ 0.23
DNMT3A-206ENST00000406659 LINC00588Q9Y4M8 146 aa16.5■□□□□ 0.23
DNMT3A-206ENST00000406659 GVQW2A0A096LPI5 108 aaPredicted RBP16.49■□□□□ 0.23
DNMT3A-206ENST00000406659 NDUFC2O95298 119 aa16.49■□□□□ 0.23
DNMT3A-206ENST00000406659 LINC01600Q96MT4 127 aa16.49■□□□□ 0.23
DNMT3A-206ENST00000406659 IGKV2D-24A0A075B6R9 120 aa16.49■□□□□ 0.23
DNMT3A-206ENST00000406659 HIGD2BQ4VC39 106 aa16.48■□□□□ 0.23
DNMT3A-206ENST00000406659 HUWE1Q7Z6Z7 4374 aaKnown RBP16.47■□□□□ 0.23
DNMT3A-206ENST00000406659 H3BT86 120 aa16.47■□□□□ 0.23
DNMT3A-206ENST00000406659 CARD19Q96LW7 228 aa16.47■□□□□ 0.23
DNMT3A-206ENST00000406659 C6orf48Q9UBA6 75 aa16.45■□□□□ 0.22
DNMT3A-206ENST00000406659 PRR3P79522 188 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-206ENST00000406659 CAMK2N2Q96S95 79 aa16.44■□□□□ 0.22
DNMT3A-206ENST00000406659 Q9HAA7 133 aa16.44■□□□□ 0.22
DNMT3A-206ENST00000406659 TRACP01848 142 aa16.43■□□□□ 0.22
DNMT3A-206ENST00000406659 C15orf56Q8N910 161 aa16.43■□□□□ 0.22
DNMT3A-206ENST00000406659 H0YGX0 51 aa16.41■□□□□ 0.22
DNMT3A-206ENST00000406659 FAM218AQ96MZ4 157 aa16.41■□□□□ 0.22
DNMT3A-206ENST00000406659 B9D2Q9BPU9 175 aa16.41■□□□□ 0.22
DNMT3A-206ENST00000406659 C2orf48Q96LS8 159 aa16.41■□□□□ 0.22
DNMT3A-206ENST00000406659 TMEM126AQ9H061 195 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms