RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 LINC00308Q8TCZ7 52 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 Q9H8V8 135 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 NBPF19A0A087WUL8 3843 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 TRAV13-1A0A0B4J241 112 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 LOC100131303A0A0U1RQF7 123 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 TRBV6-4A0A1B0GX49 114 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 H7C423 109 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 MT-ATP8P03928 68 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 XGP55808 180 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 CIRBPQ14011 172 aaKnown RBP4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 DAND5Q8N907 189 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 PPDPFQ9H3Y8 114 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 LST1O00453 97 aa4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 LINC01547P58512 204 aaPredicted RBP4.69□□□□□ -1.66
CSNK2A1-204ENST00000400227 HECTD1Q9ULT8 2610 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 NOTCH3Q9UM47 2321 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 TRGV2A0A075B6R0 118 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 TMEM262E9PQX1 116 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 H3BT86 120 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 UBE2L6O14933 153 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 COX6CP09669 75 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 HILS1P60008 231 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 HERV-K104P63124 156 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 CLEC2BQ92478 149 aa4.68□□□□□ -1.66
CSNK2A1-204ENST00000400227 TRGV4A0A0C4DH28 118 aa4.67□□□□□ -1.66
CSNK2A1-204ENST00000400227 KRTAP10-3P60369 221 aa4.67□□□□□ -1.66
CSNK2A1-204ENST00000400227 DEFB121Q5J5C9 76 aa4.67□□□□□ -1.66
CSNK2A1-204ENST00000400227 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
CSNK2A1-204ENST00000400227 LINC00612Q8N6U2 182 aa4.67□□□□□ -1.66
CSNK2A1-204ENST00000400227 COPS9Q8WXC6 57 aa4.67□□□□□ -1.66
CSNK2A1-204ENST00000400227 IGLV4-60A0A075B6I1 120 aa4.66□□□□□ -1.66
CSNK2A1-204ENST00000400227 MEIG1Q5JSS6 88 aa4.66□□□□□ -1.66
CSNK2A1-204ENST00000400227 KIR2DL5BQ8NHK3 375 aa4.66□□□□□ -1.66
CSNK2A1-204ENST00000400227 COX7B2Q8TF08 81 aa4.66□□□□□ -1.66
CSNK2A1-204ENST00000400227 UBE2WQ96B02 151 aa4.66□□□□□ -1.66
CSNK2A1-204ENST00000400227 CITED1Q99966 193 aa4.66□□□□□ -1.66
CSNK2A1-204ENST00000400227 CUBNO60494 3623 aa4.65□□□□□ -1.66
CSNK2A1-204ENST00000400227 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.66
CSNK2A1-204ENST00000400227 TRAV8-4A0A0B4J246 113 aa4.65□□□□□ -1.66
CSNK2A1-204ENST00000400227 A0A0U1RRA0 63 aa4.65□□□□□ -1.66
CSNK2A1-204ENST00000400227 TEX49A0A1B0GTD5 131 aa4.65□□□□□ -1.66
CSNK2A1-204ENST00000400227 JMJD1CQ15652 2540 aa4.65□□□□□ -1.67
CSNK2A1-204ENST00000400227 CCDC168Q8NDH2 2452 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 NIPBLQ6KC79 2804 aaeCLIP4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 IGHV3OR16-9A0A0B4J2B5 98 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 A0A1B0GV72 72 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 COX7A2LO14548 114 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 CKS1BP61024 79 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 ACANP16112 2415 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 MAST4O15021 2626 aa4.64□□□□□ -1.67
CSNK2A1-204ENST00000400227 A0A087WZ39 114 aa4.63□□□□□ -1.67
CSNK2A1-204ENST00000400227 CRLF1O75462 422 aa4.63□□□□□ -1.67
CSNK2A1-204ENST00000400227 FAM222AQ5U5X8 452 aa4.63□□□□□ -1.67
CSNK2A1-204ENST00000400227 CHCHD5Q9BSY4 110 aa4.63□□□□□ -1.67
CSNK2A1-204ENST00000400227 LINC00959A0A1B0GUT2 108 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 J3QKU1 62 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 TRACP01848 142 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 C2CD3Q4AC94 2353 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 IGKV2-28A0A075B6P5 120 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 TRAV13-2A0A0B4J235 113 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 IGKV3OR2-268A0A0C4DH90 116 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 FAM240AA0A1B0GVK7 77 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 SMIM9A6NGZ8 99 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 IBA57-AS1B1ANH7 110 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 IGKV2D-28P01615 120 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 DEFB130BP0DP73 79 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 DEFB130AP0DP74 79 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 RPL28P46779 137 aaKnown RBP4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 MRPL23Q16540 153 aaKnown RBP4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 MIR7-3HGQ8N6C7 128 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 FAM218AQ96MZ4 157 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 SMR3AQ99954 134 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 C22orf24Q9Y442 160 aa4.62□□□□□ -1.67
CSNK2A1-204ENST00000400227 ITPR2Q14571 2701 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 SETD2Q9BYW2 2564 aaPredicted RBP4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 CCL18P55774 89 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 Q6Q795 121 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 C5orf38Q86SI9 138 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 LINC01561Q8N1V8 128 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 LINC00337Q8N6G1 96 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 C15orf53Q8NAA6 179 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 SND1-IT1Q9HBX3 110 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 TOMM7Q9P0U1 55 aa4.61□□□□□ -1.67
CSNK2A1-204ENST00000400227 MTORP42345 2549 aa4.6□□□□□ -1.67
CSNK2A1-204ENST00000400227 LY6G6DO95868 133 aa4.6□□□□□ -1.67
CSNK2A1-204ENST00000400227 CRPP02741 224 aa4.6□□□□□ -1.67
CSNK2A1-204ENST00000400227 LINC00158P58513 81 aa4.6□□□□□ -1.67
CSNK2A1-204ENST00000400227 LYRM9A8MSI8 78 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 SNCGO76070 127 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 BAALC-AS2P0C853 105 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 VPREB1P12018 145 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 SS18Q15532 418 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 SMIM11BQ8TCY0 68 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 PRO0255Q9UI72 69 aa4.59□□□□□ -1.67
CSNK2A1-204ENST00000400227 C9orf66Q5T8R8 295 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms