RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 DNHD1Q96M86 4753 aa17.61■□□□□ 0.41
SHARPIN-202ENST00000398712 MTURNQ8N3F0 131 aa17.61■□□□□ 0.41
SHARPIN-202ENST00000398712 TRIAP1O43715 76 aa17.6■□□□□ 0.41
SHARPIN-202ENST00000398712 LINC00158P58513 81 aa17.6■□□□□ 0.41
SHARPIN-202ENST00000398712 MIR7-3HGQ8N6C7 128 aa17.6■□□□□ 0.41
SHARPIN-202ENST00000398712 IGLV10-54A0A075B6I4 117 aa17.58■□□□□ 0.41
SHARPIN-202ENST00000398712 COX6CP09669 75 aa17.58■□□□□ 0.41
SHARPIN-202ENST00000398712 MALP21145 153 aa17.57■□□□□ 0.4
SHARPIN-202ENST00000398712 C11orf45Q8TAV5 145 aa17.57■□□□□ 0.4
SHARPIN-202ENST00000398712 ATXN8Q156A1 80 aa17.56■□□□□ 0.4
SHARPIN-202ENST00000398712 PRR34Q9NV39 138 aa17.56■□□□□ 0.4
SHARPIN-202ENST00000398712 RNF151Q2KHN1 245 aa17.56■□□□□ 0.4
SHARPIN-202ENST00000398712 CXCL5P42830 114 aa17.55■□□□□ 0.4
SHARPIN-202ENST00000398712 KLK12Q9UKR0 248 aa17.55■□□□□ 0.4
SHARPIN-202ENST00000398712 NANOS2P60321 138 aaKnown RBP17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 CKS1BP61024 79 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 FOXI1Q12951 378 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 ETDBQ3ZM63 59 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 CFAP161Q6P656 301 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 SPATA25Q9BR10 227 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 PKD1L1Q8TDX9 2849 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 DNAH3Q8TD57 4116 aa17.54■□□□□ 0.4
SHARPIN-202ENST00000398712 SMCPP49901 116 aaPredicted RBP17.53■□□□□ 0.4
SHARPIN-202ENST00000398712 DEFB131BA0A096LNP1 70 aa17.52■□□□□ 0.4
SHARPIN-202ENST00000398712 PFN2P35080 140 aa17.52■□□□□ 0.4
SHARPIN-202ENST00000398712 GAGE12HA6NDE8 117 aa17.51■□□□□ 0.39
SHARPIN-202ENST00000398712 KIAA0087Q14695 138 aa17.51■□□□□ 0.39
SHARPIN-202ENST00000398712 SND1-IT1Q9HBX3 110 aa17.51■□□□□ 0.39
SHARPIN-202ENST00000398712 TRAV13-2A0A0B4J235 113 aa17.49■□□□□ 0.39
SHARPIN-202ENST00000398712 CRPP02741 224 aa17.49■□□□□ 0.39
SHARPIN-202ENST00000398712 ENHOQ6UWT2 76 aa17.49■□□□□ 0.39
SHARPIN-202ENST00000398712 C2orf82Q6UX34 121 aa17.49■□□□□ 0.39
SHARPIN-202ENST00000398712 TRAV8-4A0A0B4J246 113 aa17.48■□□□□ 0.39
SHARPIN-202ENST00000398712 PRB2P02812 416 aaPredicted RBP17.48■□□□□ 0.39
SHARPIN-202ENST00000398712 CCL18P55774 89 aa17.48■□□□□ 0.39
SHARPIN-202ENST00000398712 TM2D3Q9BRN9 247 aa17.48■□□□□ 0.39
SHARPIN-202ENST00000398712 KLK5Q9Y337 293 aaPredicted RBP17.48■□□□□ 0.39
SHARPIN-202ENST00000398712 J3QR89 54 aa17.47■□□□□ 0.39
SHARPIN-202ENST00000398712 K7EIL1 84 aa17.47■□□□□ 0.39
SHARPIN-202ENST00000398712 LINC01620Q4KN68 170 aa17.47■□□□□ 0.39
SHARPIN-202ENST00000398712 WFDC10BQ8IUB3 73 aa17.47■□□□□ 0.39
SHARPIN-202ENST00000398712 VPS25Q9BRG1 176 aa17.47■□□□□ 0.39
SHARPIN-202ENST00000398712 CBY1Q9Y3M2 126 aa17.47■□□□□ 0.39
SHARPIN-202ENST00000398712 C9JAW5 83 aa17.46■□□□□ 0.39
SHARPIN-202ENST00000398712 M0QXV9 152 aa17.45■□□□□ 0.38
SHARPIN-202ENST00000398712 SLC25A20O43772 301 aa17.45■□□□□ 0.38
SHARPIN-202ENST00000398712 COX17Q14061 63 aa17.45■□□□□ 0.38
SHARPIN-202ENST00000398712 ESRGQ1W209 222 aa17.44■□□□□ 0.38
SHARPIN-202ENST00000398712 UBE2WQ96B02 151 aa17.44■□□□□ 0.38
SHARPIN-202ENST00000398712 DEFB121Q5J5C9 76 aa17.43■□□□□ 0.38
SHARPIN-202ENST00000398712 TEN1Q86WV5 123 aa17.42■□□□□ 0.38
SHARPIN-202ENST00000398712 TRAV10A0A0B4J240 114 aa17.41■□□□□ 0.38
SHARPIN-202ENST00000398712 LST1O00453 97 aa17.41■□□□□ 0.38
SHARPIN-202ENST00000398712 SPAG11BQ08648 103 aa17.41■□□□□ 0.38
SHARPIN-202ENST00000398712 CLEC2BQ92478 149 aa17.41■□□□□ 0.38
SHARPIN-202ENST00000398712 IGKV2-28A0A075B6P5 120 aa17.4■□□□□ 0.38
SHARPIN-202ENST00000398712 IGKV2D-28P01615 120 aa17.4■□□□□ 0.38
SHARPIN-202ENST00000398712 LINC00337Q8N6G1 96 aa17.39■□□□□ 0.37
SHARPIN-202ENST00000398712 MRAPQ8TCY5 172 aa17.39■□□□□ 0.37
SHARPIN-202ENST00000398712 TRBV10-2A0A0K0K1G8 114 aa17.38■□□□□ 0.37
SHARPIN-202ENST00000398712 ANKRD29Q8N6D5 301 aa17.38■□□□□ 0.37
SHARPIN-202ENST00000398712 LINC01600Q96MT4 127 aa17.38■□□□□ 0.37
SHARPIN-202ENST00000398712 C15orf53Q8NAA6 179 aa17.36■□□□□ 0.37
SHARPIN-202ENST00000398712 PPDPFLQ8WWR9 84 aa17.36■□□□□ 0.37
SHARPIN-202ENST00000398712 RPL28P46779 137 aaKnown RBP17.35■□□□□ 0.37
SHARPIN-202ENST00000398712 LINC01556Q5JQF7 62 aa17.35■□□□□ 0.37
SHARPIN-202ENST00000398712 MUC7Q8TAX7 377 aa17.35■□□□□ 0.37
SHARPIN-202ENST00000398712 TENM3Q9P273 2699 aa17.34■□□□□ 0.37
SHARPIN-202ENST00000398712 H3BT86 120 aa17.32■□□□□ 0.36
SHARPIN-202ENST00000398712 C6orf223Q8N319 242 aa17.32■□□□□ 0.36
SHARPIN-202ENST00000398712 C9orf116Q5BN46 136 aaPredicted RBP17.3■□□□□ 0.36
SHARPIN-202ENST00000398712 UNQ6190/PRO20217Q6UXQ8 127 aa17.3■□□□□ 0.36
SHARPIN-202ENST00000398712 NDUFC2O95298 119 aa17.3■□□□□ 0.36
SHARPIN-202ENST00000398712 NOTCH1P46531 2555 aa17.29■□□□□ 0.36
SHARPIN-202ENST00000398712 C10orf25Q5T742 122 aa17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 KRTAP26-1Q6PEX3 210 aa17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 CARD19Q96LW7 228 aa17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 GVQW2A0A096LPI5 108 aaPredicted RBP17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 OR13C6PQ8NH95 151 aa17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 SMIM11BQ8TCY0 68 aa17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 NTN5Q8WTR8 489 aaPredicted RBP17.28■□□□□ 0.36
SHARPIN-202ENST00000398712 MGAM2Q2M2H8 2515 aa17.27■□□□□ 0.35
SHARPIN-202ENST00000398712 LINC00526Q96FQ7 95 aa17.27■□□□□ 0.35
SHARPIN-202ENST00000398712 TRACP01848 142 aa17.26■□□□□ 0.35
SHARPIN-202ENST00000398712 DNAH10OSP0CZ25 163 aa17.26■□□□□ 0.35
SHARPIN-202ENST00000398712 C1orf43Q9BWL3 253 aa17.26■□□□□ 0.35
SHARPIN-202ENST00000398712 ZNF561-AS1K7EIQ3 104 aa17.24■□□□□ 0.35
SHARPIN-202ENST00000398712 H0YGX0 51 aa17.22■□□□□ 0.35
SHARPIN-202ENST00000398712 C6orf48Q9UBA6 75 aa17.2■□□□□ 0.34
SHARPIN-202ENST00000398712 LINC00588Q9Y4M8 146 aa17.2■□□□□ 0.34
SHARPIN-202ENST00000398712 IGKV2D-24A0A075B6R9 120 aa17.19■□□□□ 0.34
SHARPIN-202ENST00000398712 FAM218AQ96MZ4 157 aa17.19■□□□□ 0.34
SHARPIN-202ENST00000398712 HIGD2BQ4VC39 106 aa17.18■□□□□ 0.34
SHARPIN-202ENST00000398712 NBEAL1Q6ZS30 2694 aa17.18■□□□□ 0.34
SHARPIN-202ENST00000398712 CAMK2N2Q96S95 79 aa17.17■□□□□ 0.34
SHARPIN-202ENST00000398712 C15orf56Q8N910 161 aa17.17■□□□□ 0.34
SHARPIN-202ENST00000398712 C2orf48Q96LS8 159 aa17.17■□□□□ 0.34
SHARPIN-202ENST00000398712 TMEM126AQ9H061 195 aa17.17■□□□□ 0.34
SHARPIN-202ENST00000398712 PRR3P79522 188 aaKnown RBP17.15■□□□□ 0.34
SHARPIN-202ENST00000398712 F8WDY8 70 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms