RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 UBE2BP63146 152 aa5.9□□□□□ -1.46
NIFKP1-201ENST00000398317 ZC2HC1BQ5TFG8 222 aa5.9□□□□□ -1.46
NIFKP1-201ENST00000398317 TMEM136Q6ZRR5 245 aa5.9□□□□□ -1.46
NIFKP1-201ENST00000398317 ORMDL3Q8N138 153 aa5.9□□□□□ -1.46
NIFKP1-201ENST00000398317 PRELID3AQ96N28 172 aa5.9□□□□□ -1.46
NIFKP1-201ENST00000398317 A0A1B0GVG6 124 aa5.89□□□□□ -1.47
NIFKP1-201ENST00000398317 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
NIFKP1-201ENST00000398317 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
NIFKP1-201ENST00000398317 TMEM141Q96I45 108 aa5.89□□□□□ -1.47
NIFKP1-201ENST00000398317 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
NIFKP1-201ENST00000398317 IGLV1-50A0A075B6I6 118 aa5.88□□□□□ -1.47
NIFKP1-201ENST00000398317 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
NIFKP1-201ENST00000398317 UBE2D1P51668 147 aa5.88□□□□□ -1.47
NIFKP1-201ENST00000398317 PACRGQ96M98 296 aaPredicted RBP5.88□□□□□ -1.47
NIFKP1-201ENST00000398317 NDUFC2-KCTD14E9PQ53 114 aa5.87□□□□□ -1.47
NIFKP1-201ENST00000398317 TEX43Q6ZNM6 134 aa5.87□□□□□ -1.47
NIFKP1-201ENST00000398317 LINC00469Q8N7U9 141 aa5.87□□□□□ -1.47
NIFKP1-201ENST00000398317 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
NIFKP1-201ENST00000398317 PRR4Q16378 134 aa5.86□□□□□ -1.47
NIFKP1-201ENST00000398317 LINC00173Q6ZV60 143 aa5.86□□□□□ -1.47
NIFKP1-201ENST00000398317 ATP5L2Q7Z4Y8 100 aa5.86□□□□□ -1.47
NIFKP1-201ENST00000398317 C2orf88Q9BSF0 95 aa5.86□□□□□ -1.47
NIFKP1-201ENST00000398317 MAP1LC3AQ9H492 121 aa5.86□□□□□ -1.47
NIFKP1-201ENST00000398317 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 PRSS2P07478 247 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 Q6ZN92 141 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 LINC01561Q8N1V8 128 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 Q8N8P6 123 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 AMELXQ99217 191 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 VCX2Q9H322 139 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 CYSLTR1Q9Y271 337 aa5.85□□□□□ -1.47
NIFKP1-201ENST00000398317 NPSP0C0P6 89 aa5.84□□□□□ -1.47
NIFKP1-201ENST00000398317 CKS1BP61024 79 aa5.84□□□□□ -1.47
NIFKP1-201ENST00000398317 C6orf226Q5I0X4 101 aa5.84□□□□□ -1.47
NIFKP1-201ENST00000398317 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.47
NIFKP1-201ENST00000398317 LAMTOR2Q9Y2Q5 125 aa5.84□□□□□ -1.47
NIFKP1-201ENST00000398317 C22orf24Q9Y442 160 aa5.84□□□□□ -1.47
NIFKP1-201ENST00000398317 MUC2Q02817 5179 aa5.83□□□□□ -1.48
NIFKP1-201ENST00000398317 ZNF861PO60384 105 aa5.83□□□□□ -1.48
NIFKP1-201ENST00000398317 RPL13AP40429 203 aaKnown RBP5.83□□□□□ -1.48
NIFKP1-201ENST00000398317 ALKBH7Q9BT30 221 aaPredicted RBP5.83□□□□□ -1.48
NIFKP1-201ENST00000398317 IGIPA6NJ69 53 aa5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 TSPAN13O95857 204 aa5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 ORMDL2Q53FV1 153 aa5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 Q8IZM0 81 aa5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 CTDSP1Q9GZU7 261 aa5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 CDKN2A-AS1Q9UH64 79 aa5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 CARHSP1Q9Y2V2 147 aaKnown RBP5.82□□□□□ -1.48
NIFKP1-201ENST00000398317 NUPR1O60356 82 aa5.81□□□□□ -1.48
NIFKP1-201ENST00000398317 LBHQ53QV2 105 aaPredicted RBP5.81□□□□□ -1.48
NIFKP1-201ENST00000398317 FAM19A3Q7Z5A8 133 aa5.81□□□□□ -1.48
NIFKP1-201ENST00000398317 MT-ND4LP03901 98 aa5.8□□□□□ -1.48
NIFKP1-201ENST00000398317 HERVK_113P63121 156 aa5.8□□□□□ -1.48
NIFKP1-201ENST00000398317 GEMIN7Q9H840 131 aaKnown RBP5.8□□□□□ -1.48
NIFKP1-201ENST00000398317 A0A087X002 238 aa5.79□□□□□ -1.48
NIFKP1-201ENST00000398317 RPL37AP8A6NKH3 93 aa5.79□□□□□ -1.48
NIFKP1-201ENST00000398317 F8VRH5 84 aa5.79□□□□□ -1.48
NIFKP1-201ENST00000398317 KIAA1644Q3SXP7 199 aa5.79□□□□□ -1.48
NIFKP1-201ENST00000398317 MRPL55Q7Z7F7 128 aaKnown RBP5.79□□□□□ -1.48
NIFKP1-201ENST00000398317 NXT2Q9NPJ8 142 aaKnown RBP5.79□□□□□ -1.48
NIFKP1-201ENST00000398317 K7EMI3 77 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 BCE1O60756 84 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 SEC11AP67812 179 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 PNRC1Q12796 327 aaPredicted RBP5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 TOMM6Q96B49 74 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 TIMM17AQ99595 171 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 TP73-AS1Q9UF72 201 aa5.78□□□□□ -1.48
NIFKP1-201ENST00000398317 GAGE10A6NGK3 116 aa5.77□□□□□ -1.49
NIFKP1-201ENST00000398317 ADCYAP1P18509 176 aa5.77□□□□□ -1.49
NIFKP1-201ENST00000398317 RPL28P46779 137 aaKnown RBP5.77□□□□□ -1.49
NIFKP1-201ENST00000398317 PAPPA-AS1Q5QFB9 102 aa5.77□□□□□ -1.49
NIFKP1-201ENST00000398317 SCGB3A1Q96QR1 104 aa5.77□□□□□ -1.49
NIFKP1-201ENST00000398317 ANAPC11Q9NYG5 84 aa5.77□□□□□ -1.49
NIFKP1-201ENST00000398317 SMIM1B2RUZ4 78 aa5.76□□□□□ -1.49
NIFKP1-201ENST00000398317 G0S2P27469 103 aa5.76□□□□□ -1.49
NIFKP1-201ENST00000398317 CXCL5P42830 114 aa5.76□□□□□ -1.49
NIFKP1-201ENST00000398317 RAB5BP61020 215 aa5.76□□□□□ -1.49
NIFKP1-201ENST00000398317 TYMSOSQ8TAI1 123 aa5.76□□□□□ -1.49
NIFKP1-201ENST00000398317 COX7B2Q8TF08 81 aa5.76□□□□□ -1.49
NIFKP1-201ENST00000398317 TINCRA0A1B0GVN0 87 aa5.75□□□□□ -1.49
NIFKP1-201ENST00000398317 SPINK8P0C7L1 97 aa5.75□□□□□ -1.49
NIFKP1-201ENST00000398317 CRYGAP11844 174 aa5.75□□□□□ -1.49
NIFKP1-201ENST00000398317 PDZD11Q5EBL8 140 aa5.75□□□□□ -1.49
NIFKP1-201ENST00000398317 ERASQ7Z444 233 aa5.75□□□□□ -1.49
NIFKP1-201ENST00000398317 SCO1O75880 301 aa5.74□□□□□ -1.49
NIFKP1-201ENST00000398317 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
NIFKP1-201ENST00000398317 UBE2AP49459 152 aa5.73□□□□□ -1.49
NIFKP1-201ENST00000398317 KRTAP13-2Q52LG2 175 aa5.73□□□□□ -1.49
NIFKP1-201ENST00000398317 NKAPP1Q8N9T2 125 aa5.73□□□□□ -1.49
NIFKP1-201ENST00000398317 CST9LQ9H4G1 147 aa5.73□□□□□ -1.49
NIFKP1-201ENST00000398317 IGLV5-37A0A075B6J1 123 aa5.72□□□□□ -1.49
NIFKP1-201ENST00000398317 RAB14P61106 215 aa5.72□□□□□ -1.49
NIFKP1-201ENST00000398317 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
NIFKP1-201ENST00000398317 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
NIFKP1-201ENST00000398317 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
NIFKP1-201ENST00000398317 A0A0U1RQV1 116 aa5.71□□□□□ -1.5
NIFKP1-201ENST00000398317 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
NIFKP1-201ENST00000398317 PMVKQ15126 192 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms