RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 BBC3Q96PG8 261 aaPredicted RBP7.87□□□□□ -1.15
CSGALNACT1-202ENST00000397998 A0A087WZ39 114 aa7.87□□□□□ -1.15
CSGALNACT1-202ENST00000397998 REG3AQ06141 175 aa7.87□□□□□ -1.15
CSGALNACT1-202ENST00000397998 SCXQ7RTU7 201 aa7.87□□□□□ -1.15
CSGALNACT1-202ENST00000397998 C9orf116Q5BN46 136 aaPredicted RBP7.86□□□□□ -1.15
CSGALNACT1-202ENST00000397998 KRTAP10-9P60411 292 aa7.86□□□□□ -1.15
CSGALNACT1-202ENST00000397998 DEFB121Q5J5C9 76 aa7.86□□□□□ -1.15
CSGALNACT1-202ENST00000397998 XAGE1AQ9HD64 81 aa7.86□□□□□ -1.15
CSGALNACT1-202ENST00000397998 TMEM258P61165 79 aa7.85□□□□□ -1.15
CSGALNACT1-202ENST00000397998 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
CSGALNACT1-202ENST00000397998 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
CSGALNACT1-202ENST00000397998 CCKP06307 115 aa7.84□□□□□ -1.15
CSGALNACT1-202ENST00000397998 IGHV3OR16-9A0A0B4J2B5 98 aa7.84□□□□□ -1.15
CSGALNACT1-202ENST00000397998 HILS1P60008 231 aa7.84□□□□□ -1.15
CSGALNACT1-202ENST00000397998 Q6ZQY7 126 aa7.84□□□□□ -1.16
CSGALNACT1-202ENST00000397998 FHL2Q14192 279 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 FAM19A1Q7Z5A9 133 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 CAMK2N2Q96S95 79 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 IGKV2-28A0A075B6P5 120 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 IGKV2D-28P01615 120 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 LINC00482Q8N8I6 264 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 DIRC1Q969H9 104 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 Q8N814 137 aa7.83□□□□□ -1.16
CSGALNACT1-202ENST00000397998 C5orf47Q569G3 176 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 Q8IZM0 81 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 LINC01006Q8NI28 216 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 ATP5EP2Q5VTU8 51 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 FAM104AQ969W3 186 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 LAMA5O15230 3695 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 APOC4P55056 127 aa7.82□□□□□ -1.16
CSGALNACT1-202ENST00000397998 A8MTW9 85 aa7.81□□□□□ -1.16
CSGALNACT1-202ENST00000397998 CD164L2Q6UWJ8 174 aa7.81□□□□□ -1.16
CSGALNACT1-202ENST00000397998 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
CSGALNACT1-202ENST00000397998 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
CSGALNACT1-202ENST00000397998 FAM236DA0A1B0GTK5 79 aa7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 FAM236CP0DP71 79 aa7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 IGHV4-28A0A0C4DH34 117 aa7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 SMIM9A6NGZ8 99 aa7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 NKAPP1Q8N9T2 125 aa7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 ASH1LQ9NR48 2969 aaKnown RBP7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
CSGALNACT1-202ENST00000397998 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
CSGALNACT1-202ENST00000397998 SMG1Q96Q15 3661 aaKnown RBP7.79□□□□□ -1.16
CSGALNACT1-202ENST00000397998 SPART-AS1P0CW21 52 aa7.79□□□□□ -1.16
CSGALNACT1-202ENST00000397998 COX7BP24311 80 aa7.78□□□□□ -1.16
CSGALNACT1-202ENST00000397998 NREPQ16612 68 aa7.78□□□□□ -1.16
CSGALNACT1-202ENST00000397998 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
CSGALNACT1-202ENST00000397998 IGKV2D-24A0A075B6R9 120 aa7.78□□□□□ -1.16
CSGALNACT1-202ENST00000397998 CRYGAP11844 174 aa7.78□□□□□ -1.16
CSGALNACT1-202ENST00000397998 HRCT1Q6UXD1 115 aa7.78□□□□□ -1.16
CSGALNACT1-202ENST00000397998 NDUFC2O95298 119 aa7.77□□□□□ -1.17
CSGALNACT1-202ENST00000397998 PDE6GP18545 87 aa7.77□□□□□ -1.17
CSGALNACT1-202ENST00000397998 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
CSGALNACT1-202ENST00000397998 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
CSGALNACT1-202ENST00000397998 CYSRT1A8MQ03 144 aa7.76□□□□□ -1.17
CSGALNACT1-202ENST00000397998 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
CSGALNACT1-202ENST00000397998 C1orf43Q9BWL3 253 aa7.75□□□□□ -1.17
CSGALNACT1-202ENST00000397998 LINC01600Q96MT4 127 aa7.75□□□□□ -1.17
CSGALNACT1-202ENST00000397998 RELNP78509 3460 aa7.74□□□□□ -1.17
CSGALNACT1-202ENST00000397998 COX17Q14061 63 aa7.74□□□□□ -1.17
CSGALNACT1-202ENST00000397998 C9orf66Q5T8R8 295 aa7.74□□□□□ -1.17
CSGALNACT1-202ENST00000397998 LYRM9A8MSI8 78 aa7.74□□□□□ -1.17
CSGALNACT1-202ENST00000397998 MRAPQ8TCY5 172 aa7.74□□□□□ -1.17
CSGALNACT1-202ENST00000397998 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
CSGALNACT1-202ENST00000397998 ZNF843Q8N446 348 aa7.73□□□□□ -1.17
CSGALNACT1-202ENST00000397998 CHD6Q8TD26 2715 aa7.73□□□□□ -1.17
CSGALNACT1-202ENST00000397998 TRBV10-3A0A0K0K1G6 114 aa7.72□□□□□ -1.17
CSGALNACT1-202ENST00000397998 A0A1B0GUV1 79 aa7.72□□□□□ -1.17
CSGALNACT1-202ENST00000397998 H3BQ85 93 aa7.71□□□□□ -1.17
CSGALNACT1-202ENST00000397998 C3orf84H3BNL1 204 aa7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 LINC00575Q6W349 94 aa7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 DPH3Q96FX2 82 aa7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 F8WEM9 126 aa7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 PRB2P02812 416 aaPredicted RBP7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 Q8N3U1 123 aa7.71□□□□□ -1.18
CSGALNACT1-202ENST00000397998 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
CSGALNACT1-202ENST00000397998 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
CSGALNACT1-202ENST00000397998 BPY2O14599 106 aa7.7□□□□□ -1.18
CSGALNACT1-202ENST00000397998 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
CSGALNACT1-202ENST00000397998 Q6ZVQ6 151 aa7.7□□□□□ -1.18
CSGALNACT1-202ENST00000397998 FLNAP21333 2647 aaKnown RBP7.7□□□□□ -1.18
CSGALNACT1-202ENST00000397998 HRNRQ86YZ3 2850 aaPredicted RBP7.69□□□□□ -1.18
CSGALNACT1-202ENST00000397998 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
CSGALNACT1-202ENST00000397998 MPLKIPQ8TAP9 179 aa7.69□□□□□ -1.18
CSGALNACT1-202ENST00000397998 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
CSGALNACT1-202ENST00000397998 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
CSGALNACT1-202ENST00000397998 FSHBP01225 129 aa7.68□□□□□ -1.18
CSGALNACT1-202ENST00000397998 UBE2BP63146 152 aa7.68□□□□□ -1.18
CSGALNACT1-202ENST00000397998 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
CSGALNACT1-202ENST00000397998 RMI2Q96E14 147 aa7.68□□□□□ -1.18
CSGALNACT1-202ENST00000397998 FLNCQ14315 2725 aa7.67□□□□□ -1.18
CSGALNACT1-202ENST00000397998 F8P00451 2351 aa7.67□□□□□ -1.18
CSGALNACT1-202ENST00000397998 BRK1Q8WUW1 75 aa7.67□□□□□ -1.18
CSGALNACT1-202ENST00000397998 LELP1Q5T871 98 aa7.67□□□□□ -1.18
CSGALNACT1-202ENST00000397998 DCHS2Q6V1P9 2916 aa7.67□□□□□ -1.18
CSGALNACT1-202ENST00000397998 C4orf26Q17RF5 130 aa7.66□□□□□ -1.18
CSGALNACT1-202ENST00000397998 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
CSGALNACT1-202ENST00000397998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms