RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 UPK3BQ9BT76 320 aa10.12□□□□□ -0.79
CAPN3-207ENST00000397200 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
CAPN3-207ENST00000397200 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
CAPN3-207ENST00000397200 LINC01561Q8N1V8 128 aa10.11□□□□□ -0.79
CAPN3-207ENST00000397200 COX7B2Q8TF08 81 aa10.1□□□□□ -0.79
CAPN3-207ENST00000397200 PRO0461Q9UI25 63 aa10.1□□□□□ -0.79
CAPN3-207ENST00000397200 F8W1H4 67 aa10.09□□□□□ -0.79
CAPN3-207ENST00000397200 OCIAD2Q56VL3 154 aa10.09□□□□□ -0.79
CAPN3-207ENST00000397200 LYSTQ99698 3801 aa10.08□□□□□ -0.8
CAPN3-207ENST00000397200 H3BMG7 143 aa10.08□□□□□ -0.8
CAPN3-207ENST00000397200 PRSS2P07478 247 aa10.08□□□□□ -0.8
CAPN3-207ENST00000397200 SS18Q15532 418 aa10.08□□□□□ -0.8
CAPN3-207ENST00000397200 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
CAPN3-207ENST00000397200 IGKV3OR2-268A0A0C4DH90 116 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 TRBV20-1A0A075B6N2 111 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
CAPN3-207ENST00000397200 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
CAPN3-207ENST00000397200 LY6G6CO95867 125 aa10.06□□□□□ -0.8
CAPN3-207ENST00000397200 SOSTDC1Q6X4U4 206 aa10.06□□□□□ -0.8
CAPN3-207ENST00000397200 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
CAPN3-207ENST00000397200 Q8N3U1 123 aa10.06□□□□□ -0.8
CAPN3-207ENST00000397200 LINC00476Q8WZB0 136 aa10.06□□□□□ -0.8
CAPN3-207ENST00000397200 DAND5Q8N907 189 aa10.05□□□□□ -0.8
CAPN3-207ENST00000397200 TRBV30A0A0K0K1B3 111 aa10.04□□□□□ -0.8
CAPN3-207ENST00000397200 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
CAPN3-207ENST00000397200 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
CAPN3-207ENST00000397200 TCL1BO95988 128 aa10.04□□□□□ -0.8
CAPN3-207ENST00000397200 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
CAPN3-207ENST00000397200 NPC2P61916 151 aa10.04□□□□□ -0.8
CAPN3-207ENST00000397200 LINC00269Q8N2A0 174 aa10.04□□□□□ -0.8
CAPN3-207ENST00000397200 K7ERU9 68 aa10.03□□□□□ -0.8
CAPN3-207ENST00000397200 XCL1P47992 114 aa10.03□□□□□ -0.8
CAPN3-207ENST00000397200 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
CAPN3-207ENST00000397200 Q8IZM0 81 aa10.03□□□□□ -0.8
CAPN3-207ENST00000397200 IBA57-AS1B1ANH7 110 aa10.02□□□□□ -0.81
CAPN3-207ENST00000397200 PSMB2P49721 201 aa10.02□□□□□ -0.81
CAPN3-207ENST00000397200 REG3AQ06141 175 aa10.02□□□□□ -0.81
CAPN3-207ENST00000397200 WFDC2Q14508 124 aa10.02□□□□□ -0.81
CAPN3-207ENST00000397200 KLK12Q9UKR0 248 aa10.02□□□□□ -0.81
CAPN3-207ENST00000397200 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
CAPN3-207ENST00000397200 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
CAPN3-207ENST00000397200 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
CAPN3-207ENST00000397200 TRIAP1O43715 76 aa10□□□□□ -0.81
CAPN3-207ENST00000397200 SMCPP49901 116 aaPredicted RBP10□□□□□ -0.81
CAPN3-207ENST00000397200 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
CAPN3-207ENST00000397200 Q1RN00 199 aa10□□□□□ -0.81
CAPN3-207ENST00000397200 TTC32Q5I0X7 151 aa10□□□□□ -0.81
CAPN3-207ENST00000397200 CHCHD10Q8WYQ3 142 aaPredicted RBP10□□□□□ -0.81
CAPN3-207ENST00000397200 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
CAPN3-207ENST00000397200 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
CAPN3-207ENST00000397200 NBDYA0A0U1RRE5 68 aa9.99□□□□□ -0.81
CAPN3-207ENST00000397200 H7C2G1 150 aa9.99□□□□□ -0.81
CAPN3-207ENST00000397200 CRPP02741 224 aa9.99□□□□□ -0.81
CAPN3-207ENST00000397200 RPL13AP40429 203 aaKnown RBP9.99□□□□□ -0.81
CAPN3-207ENST00000397200 M0QXV9 152 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 COX7A2LO14548 114 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 SCGB1C2P0DMR2 95 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 FOXI1Q12951 378 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
CAPN3-207ENST00000397200 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
CAPN3-207ENST00000397200 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
CAPN3-207ENST00000397200 KRTAP1-5Q9BYS1 174 aa9.97□□□□□ -0.81
CAPN3-207ENST00000397200 LCE6AA0A183 80 aa9.96□□□□□ -0.81
CAPN3-207ENST00000397200 CXCL5P42830 114 aa9.96□□□□□ -0.81
CAPN3-207ENST00000397200 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.82
CAPN3-207ENST00000397200 M0R2N4 97 aa9.96□□□□□ -0.82
CAPN3-207ENST00000397200 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
CAPN3-207ENST00000397200 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
CAPN3-207ENST00000397200 ATXN8Q156A1 80 aa9.95□□□□□ -0.82
CAPN3-207ENST00000397200 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
CAPN3-207ENST00000397200 Q9HAA7 133 aa9.95□□□□□ -0.82
CAPN3-207ENST00000397200 IGLV10-54A0A075B6I4 117 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 COX6CP09669 75 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 LINC00158P58513 81 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 TRAV8-4A0A0B4J246 113 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 Q6ZR54 194 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
CAPN3-207ENST00000397200 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
CAPN3-207ENST00000397200 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
CAPN3-207ENST00000397200 RMI2Q96E14 147 aa9.92□□□□□ -0.82
CAPN3-207ENST00000397200 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 LST1O00453 97 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 COX17Q14061 63 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 TEN1Q86WV5 123 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
CAPN3-207ENST00000397200 KMT2AQ03164 3969 aa9.9□□□□□ -0.82
CAPN3-207ENST00000397200 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
CAPN3-207ENST00000397200 SLC25A20O43772 301 aa9.9□□□□□ -0.82
CAPN3-207ENST00000397200 CKS1BP61024 79 aa9.9□□□□□ -0.82
CAPN3-207ENST00000397200 RNF151Q2KHN1 245 aa9.9□□□□□ -0.82
CAPN3-207ENST00000397200 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms