RNA–Protein interactions for RNA: ENST00000395873.7

ZNF248-204, Transcript of zinc finger protein 248, humanhuman

TSL 3

Gene ZNF248, Length 698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-204ENST00000395873 SMCO4Q9NRQ5 59 aa13.61□□□□□ -0.23
ZNF248-204ENST00000395873 LINC01546A6NGU7 62 aa13.6□□□□□ -0.23
ZNF248-204ENST00000395873 C1orf137Q5JT78 98 aa13.6□□□□□ -0.23
ZNF248-204ENST00000395873 RPS10P5Q9NQ39 176 aa13.6□□□□□ -0.23
ZNF248-204ENST00000395873 CXCL5P42830 114 aa13.59□□□□□ -0.23
ZNF248-204ENST00000395873 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
ZNF248-204ENST00000395873 FAM19A5Q7Z5A7 132 aaPredicted RBP13.59□□□□□ -0.23
ZNF248-204ENST00000395873 MRPL18Q9H0U6 180 aaKnown RBP13.59□□□□□ -0.23
ZNF248-204ENST00000395873 FABP9Q0Z7S8 132 aa13.58□□□□□ -0.24
ZNF248-204ENST00000395873 CDKN2A-AS1Q9UH64 79 aa13.58□□□□□ -0.24
ZNF248-204ENST00000395873 NDUFA5Q16718 116 aa13.57□□□□□ -0.24
ZNF248-204ENST00000395873 FAM168BA1KXE4 195 aa13.56□□□□□ -0.24
ZNF248-204ENST00000395873 TINCRA0A1B0GVN0 87 aa13.55□□□□□ -0.24
ZNF248-204ENST00000395873 F8VRH5 84 aa13.55□□□□□ -0.24
ZNF248-204ENST00000395873 M0QXV9 152 aa13.55□□□□□ -0.24
ZNF248-204ENST00000395873 APOC3P02656 99 aa13.55□□□□□ -0.24
ZNF248-204ENST00000395873 LINC00469Q8N7U9 141 aa13.55□□□□□ -0.24
ZNF248-204ENST00000395873 UBE2BP63146 152 aa13.54□□□□□ -0.24
ZNF248-204ENST00000395873 PDZD11Q5EBL8 140 aa13.53□□□□□ -0.24
ZNF248-204ENST00000395873 SVBPQ8N300 66 aa13.53□□□□□ -0.24
ZNF248-204ENST00000395873 SNAPINO95295 136 aa13.52□□□□□ -0.25
ZNF248-204ENST00000395873 IGLV7-43P04211 117 aa13.52□□□□□ -0.25
ZNF248-204ENST00000395873 PMVKQ15126 192 aa13.52□□□□□ -0.25
ZNF248-204ENST00000395873 DIRC1Q969H9 104 aa13.52□□□□□ -0.25
ZNF248-204ENST00000395873 CST9LQ9H4G1 147 aa13.51□□□□□ -0.25
ZNF248-204ENST00000395873 IGLV5-45A0A087WSX0 123 aa13.5□□□□□ -0.25
ZNF248-204ENST00000395873 C9orf129Q5T035 196 aaKnown RBP13.5□□□□□ -0.25
ZNF248-204ENST00000395873 TRAPPC1Q9Y5R8 145 aa13.5□□□□□ -0.25
ZNF248-204ENST00000395873 SMIM1B2RUZ4 78 aa13.49□□□□□ -0.25
ZNF248-204ENST00000395873 H3BRM9 83 aa13.49□□□□□ -0.25
ZNF248-204ENST00000395873 KRTAP10-8P60410 259 aa13.48□□□□□ -0.25
ZNF248-204ENST00000395873 ODF1Q14990 250 aa13.48□□□□□ -0.25
ZNF248-204ENST00000395873 COX7B2Q8TF08 81 aa13.48□□□□□ -0.25
ZNF248-204ENST00000395873 HMCN2Q8NDA2 5059 aa13.48□□□□□ -0.25
ZNF248-204ENST00000395873 LBHQ53QV2 105 aaPredicted RBP13.47□□□□□ -0.25
ZNF248-204ENST00000395873 TNXBP22105 4242 aa13.46□□□□□ -0.26
ZNF248-204ENST00000395873 LINC00614P0C842 121 aa13.45□□□□□ -0.26
ZNF248-204ENST00000395873 RAB5BP61020 215 aa13.45□□□□□ -0.26
ZNF248-204ENST00000395873 KRTAP7-1Q8IUC3 87 aa13.45□□□□□ -0.26
ZNF248-204ENST00000395873 C18orf32Q8TCD1 76 aa13.44□□□□□ -0.26
ZNF248-204ENST00000395873 H0Y9J4 135 aa13.43□□□□□ -0.26
ZNF248-204ENST00000395873 HBDP02042 147 aa13.43□□□□□ -0.26
ZNF248-204ENST00000395873 XAGE1AQ9HD64 81 aa13.43□□□□□ -0.26
ZNF248-204ENST00000395873 NUPR1O60356 82 aa13.42□□□□□ -0.26
ZNF248-204ENST00000395873 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
ZNF248-204ENST00000395873 SPINK8P0C7L1 97 aa13.41□□□□□ -0.26
ZNF248-204ENST00000395873 IGLC3P0DOY3 106 aa13.41□□□□□ -0.26
ZNF248-204ENST00000395873 NDUFA6P56556 154 aa13.41□□□□□ -0.26
ZNF248-204ENST00000395873 KRTAP11-1Q8IUC1 163 aa13.41□□□□□ -0.26
ZNF248-204ENST00000395873 C22orf24Q9Y442 160 aa13.41□□□□□ -0.26
ZNF248-204ENST00000395873 ATP5LO75964 103 aa13.4□□□□□ -0.26
ZNF248-204ENST00000395873 MRPL55Q7Z7F7 128 aaKnown RBP13.38□□□□□ -0.27
ZNF248-204ENST00000395873 SLC7A5P1Q8MH63 180 aa13.38□□□□□ -0.27
ZNF248-204ENST00000395873 A0A096LNJ9 63 aa13.37□□□□□ -0.27
ZNF248-204ENST00000395873 IGLV1-50A0A075B6I6 118 aa13.35□□□□□ -0.27
ZNF248-204ENST00000395873 SFTA2Q6UW10 78 aa13.35□□□□□ -0.27
ZNF248-204ENST00000395873 URB1-AS1Q96HZ7 61 aa13.35□□□□□ -0.27
ZNF248-204ENST00000395873 ZNF861PO60384 105 aa13.34□□□□□ -0.27
ZNF248-204ENST00000395873 IGLV5-39A0A0G2JS06 123 aa13.33□□□□□ -0.28
ZNF248-204ENST00000395873 ZNF22P17026 224 aaPredicted RBP13.33□□□□□ -0.28
ZNF248-204ENST00000395873 RPL13AP40429 203 aaKnown RBP13.32□□□□□ -0.28
ZNF248-204ENST00000395873 PMCHL1Q16048 86 aa13.32□□□□□ -0.28
ZNF248-204ENST00000395873 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
ZNF248-204ENST00000395873 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
ZNF248-204ENST00000395873 CHCHD1Q96BP2 118 aaKnown RBP13.31□□□□□ -0.28
ZNF248-204ENST00000395873 RPL28P46779 137 aaKnown RBP13.3□□□□□ -0.28
ZNF248-204ENST00000395873 COX17Q14061 63 aa13.3□□□□□ -0.28
ZNF248-204ENST00000395873 PRR26Q8N8Z3 221 aa13.3□□□□□ -0.28
ZNF248-204ENST00000395873 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
ZNF248-204ENST00000395873 IGLV5-37A0A075B6J1 123 aa13.29□□□□□ -0.28
ZNF248-204ENST00000395873 TMEM170BQ5T4T1 132 aa13.29□□□□□ -0.28
ZNF248-204ENST00000395873 BCE1O60756 84 aa13.28□□□□□ -0.28
ZNF248-204ENST00000395873 LINC00167Q96N53 147 aa13.28□□□□□ -0.28
ZNF248-204ENST00000395873 PFN2P35080 140 aa13.27□□□□□ -0.29
ZNF248-204ENST00000395873 CBLN2Q8IUK8 224 aa13.27□□□□□ -0.29
ZNF248-204ENST00000395873 ERG28Q9UKR5 140 aa13.27□□□□□ -0.29
ZNF248-204ENST00000395873 C11orf86A6NJI1 115 aa13.26□□□□□ -0.29
ZNF248-204ENST00000395873 KRTAP1-4P0C5Y4 121 aa13.26□□□□□ -0.29
ZNF248-204ENST00000395873 CHTOPQ9Y3Y2 248 aaKnown RBP13.26□□□□□ -0.29
ZNF248-204ENST00000395873 TRAV12-1A0A0B4J245 112 aa13.24□□□□□ -0.29
ZNF248-204ENST00000395873 RPL24P83731 157 aaKnown RBP13.24□□□□□ -0.29
ZNF248-204ENST00000395873 RPL37AP8A6NKH3 93 aa13.23□□□□□ -0.29
ZNF248-204ENST00000395873 IFI27L1Q96BM0 104 aa13.23□□□□□ -0.29
ZNF248-204ENST00000395873 GAGE10A6NGK3 116 aa13.22□□□□□ -0.29
ZNF248-204ENST00000395873 UBR4Q5T4S7 5183 aa13.22□□□□□ -0.29
ZNF248-204ENST00000395873 HSBP1O75506 76 aa13.21□□□□□ -0.29
ZNF248-204ENST00000395873 SND1-IT1Q9HBX3 110 aa13.21□□□□□ -0.29
ZNF248-204ENST00000395873 UBE2AP49459 152 aa13.19□□□□□ -0.3
ZNF248-204ENST00000395873 ZNF625Q96I27 306 aaPredicted RBP13.18□□□□□ -0.3
ZNF248-204ENST00000395873 TMEM223A0PJW6 202 aa13.16□□□□□ -0.3
ZNF248-204ENST00000395873 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
ZNF248-204ENST00000395873 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
ZNF248-204ENST00000395873 VPREB1P12018 145 aa13.15□□□□□ -0.3
ZNF248-204ENST00000395873 LINC00158P58513 81 aa13.14□□□□□ -0.31
ZNF248-204ENST00000395873 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
ZNF248-204ENST00000395873 ATP6V1G1O75348 118 aa13.13□□□□□ -0.31
ZNF248-204ENST00000395873 TRGC2P03986 189 aa13.13□□□□□ -0.31
ZNF248-204ENST00000395873 CRYGAP11844 174 aa13.13□□□□□ -0.31
ZNF248-204ENST00000395873 COLCA2A8K830 154 aa13.11□□□□□ -0.31
ZNF248-204ENST00000395873 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms