RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 HERV-K104P63124 156 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 SOSTDC1Q6X4U4 206 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 FBN3Q75N90 2809 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 SS18Q15532 418 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 MTURNQ8N3F0 131 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 PRO0461Q9UI25 63 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 ERG28Q9UKR5 140 aa11.57□□□□□ -0.56
SLC6A4-202ENST00000394821 MEIG1Q5JSS6 88 aa11.56□□□□□ -0.56
SLC6A4-202ENST00000394821 SH2D6Q7Z4S9 175 aa11.56□□□□□ -0.56
SLC6A4-202ENST00000394821 DNAH7Q8WXX0 4024 aa11.56□□□□□ -0.56
SLC6A4-202ENST00000394821 DYNC2H1Q8NCM8 4307 aaKnown RBP11.55□□□□□ -0.56
SLC6A4-202ENST00000394821 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
SLC6A4-202ENST00000394821 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
SLC6A4-202ENST00000394821 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SLC6A4-202ENST00000394821 TCL1BO95988 128 aa11.54□□□□□ -0.56
SLC6A4-202ENST00000394821 PSMB2P49721 201 aa11.54□□□□□ -0.56
SLC6A4-202ENST00000394821 F8W1H4 67 aa11.54□□□□□ -0.56
SLC6A4-202ENST00000394821 REG3AQ06141 175 aa11.54□□□□□ -0.56
SLC6A4-202ENST00000394821 PLECQ15149 4684 aaKnown RBP11.53□□□□□ -0.56
SLC6A4-202ENST00000394821 STARD9Q9P2P6 4700 aa11.53□□□□□ -0.56
SLC6A4-202ENST00000394821 IGLV10-54A0A075B6I4 117 aa11.52□□□□□ -0.57
SLC6A4-202ENST00000394821 LYRM7Q5U5X0 104 aa11.51□□□□□ -0.57
SLC6A4-202ENST00000394821 CHCHD10Q8WYQ3 142 aaPredicted RBP11.51□□□□□ -0.57
SLC6A4-202ENST00000394821 Q1RN00 199 aa11.51□□□□□ -0.57
SLC6A4-202ENST00000394821 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
SLC6A4-202ENST00000394821 SCGB1C2P0DMR2 95 aa11.5□□□□□ -0.57
SLC6A4-202ENST00000394821 TRIAP1O43715 76 aa11.5□□□□□ -0.57
SLC6A4-202ENST00000394821 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
SLC6A4-202ENST00000394821 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
SLC6A4-202ENST00000394821 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
SLC6A4-202ENST00000394821 TRBV20-1A0A075B6N2 111 aa11.49□□□□□ -0.57
SLC6A4-202ENST00000394821 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
SLC6A4-202ENST00000394821 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
SLC6A4-202ENST00000394821 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
SLC6A4-202ENST00000394821 TGP01266 2768 aa11.48□□□□□ -0.57
SLC6A4-202ENST00000394821 C6orf226Q5I0X4 101 aa11.48□□□□□ -0.57
SLC6A4-202ENST00000394821 LINC01561Q8N1V8 128 aa11.48□□□□□ -0.57
SLC6A4-202ENST00000394821 C15orf53Q8NAA6 179 aa11.48□□□□□ -0.57
SLC6A4-202ENST00000394821 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 Q8IZM0 81 aa11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 COX7A2LO14548 114 aa11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 FOXI1Q12951 378 aa11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 ETDBQ3ZM63 59 aa11.47□□□□□ -0.57
SLC6A4-202ENST00000394821 IBA57-AS1B1ANH7 110 aa11.46□□□□□ -0.57
SLC6A4-202ENST00000394821 K7ERU9 68 aa11.46□□□□□ -0.57
SLC6A4-202ENST00000394821 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
SLC6A4-202ENST00000394821 COPS9Q8WXC6 57 aa11.46□□□□□ -0.57
SLC6A4-202ENST00000394821 PPDPFQ9H3Y8 114 aa11.46□□□□□ -0.57
SLC6A4-202ENST00000394821 LINC00158P58513 81 aa11.45□□□□□ -0.58
SLC6A4-202ENST00000394821 ENHOQ6UWT2 76 aa11.45□□□□□ -0.58
SLC6A4-202ENST00000394821 DNAH1Q9P2D7 4330 aa11.45□□□□□ -0.58
SLC6A4-202ENST00000394821 PFN2P35080 140 aa11.45□□□□□ -0.58
SLC6A4-202ENST00000394821 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
SLC6A4-202ENST00000394821 APLNQ9ULZ1 77 aa11.44□□□□□ -0.58
SLC6A4-202ENST00000394821 CCL18P55774 89 aa11.42□□□□□ -0.58
SLC6A4-202ENST00000394821 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
SLC6A4-202ENST00000394821 GAGE12HA6NDE8 117 aa11.41□□□□□ -0.58
SLC6A4-202ENST00000394821 MALP21145 153 aa11.41□□□□□ -0.58
SLC6A4-202ENST00000394821 IGKV2-28A0A075B6P5 120 aa11.41□□□□□ -0.58
SLC6A4-202ENST00000394821 IGKV2D-28P01615 120 aa11.41□□□□□ -0.58
SLC6A4-202ENST00000394821 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
SLC6A4-202ENST00000394821 CBY1Q9Y3M2 126 aa11.4□□□□□ -0.58
SLC6A4-202ENST00000394821 CKS1BP61024 79 aa11.4□□□□□ -0.59
SLC6A4-202ENST00000394821 ATXN8Q156A1 80 aa11.39□□□□□ -0.59
SLC6A4-202ENST00000394821 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
SLC6A4-202ENST00000394821 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
SLC6A4-202ENST00000394821 CLEC2BQ92478 149 aa11.39□□□□□ -0.59
SLC6A4-202ENST00000394821 C9JAW5 83 aa11.38□□□□□ -0.59
SLC6A4-202ENST00000394821 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
SLC6A4-202ENST00000394821 COX6CP09669 75 aa11.37□□□□□ -0.59
SLC6A4-202ENST00000394821 DNAH10OSP0CZ25 163 aa11.37□□□□□ -0.59
SLC6A4-202ENST00000394821 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
SLC6A4-202ENST00000394821 KLK5Q9Y337 293 aaPredicted RBP11.37□□□□□ -0.59
SLC6A4-202ENST00000394821 SLC25A20O43772 301 aa11.36□□□□□ -0.59
SLC6A4-202ENST00000394821 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
SLC6A4-202ENST00000394821 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
SLC6A4-202ENST00000394821 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
SLC6A4-202ENST00000394821 CRPP02741 224 aa11.35□□□□□ -0.59
SLC6A4-202ENST00000394821 CXCL5P42830 114 aa11.35□□□□□ -0.59
SLC6A4-202ENST00000394821 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
SLC6A4-202ENST00000394821 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
SLC6A4-202ENST00000394821 VPS25Q9BRG1 176 aa11.35□□□□□ -0.59
SLC6A4-202ENST00000394821 LST1O00453 97 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 C21orf62-AS1Q17RA5 79 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 C10orf25Q5T742 122 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 TRAV13-2A0A0B4J235 113 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 KRTAP26-1Q6PEX3 210 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 Q9HAA7 133 aa11.34□□□□□ -0.59
SLC6A4-202ENST00000394821 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.6
SLC6A4-202ENST00000394821 PCP4P48539 62 aa11.33□□□□□ -0.6
SLC6A4-202ENST00000394821 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
SLC6A4-202ENST00000394821 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
SLC6A4-202ENST00000394821 UNQ6190/PRO20217Q6UXQ8 127 aa11.33□□□□□ -0.6
SLC6A4-202ENST00000394821 ANKRD29Q8N6D5 301 aa11.32□□□□□ -0.6
SLC6A4-202ENST00000394821 CARD19Q96LW7 228 aa11.32□□□□□ -0.6
SLC6A4-202ENST00000394821 KRTAP1-5Q9BYS1 174 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms