RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 DIRC1Q969H9 104 aa11.7□□□□□ -0.54
SNX9-201ENST00000392185 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
SNX9-201ENST00000392185 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
SNX9-201ENST00000392185 SMIM1B2RUZ4 78 aa11.69□□□□□ -0.54
SNX9-201ENST00000392185 TRIAP1O43715 76 aa11.68□□□□□ -0.54
SNX9-201ENST00000392185 USP34Q70CQ2 3546 aa11.68□□□□□ -0.54
SNX9-201ENST00000392185 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
SNX9-201ENST00000392185 TRBV10-2A0A0K0K1G8 114 aa11.67□□□□□ -0.54
SNX9-201ENST00000392185 AMELXQ99217 191 aa11.67□□□□□ -0.54
SNX9-201ENST00000392185 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
SNX9-201ENST00000392185 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
SNX9-201ENST00000392185 SLPIP03973 132 aa11.66□□□□□ -0.54
SNX9-201ENST00000392185 NTM-AS1Q6ZSK4 140 aa11.65□□□□□ -0.54
SNX9-201ENST00000392185 CYSRT1A8MQ03 144 aa11.65□□□□□ -0.54
SNX9-201ENST00000392185 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
SNX9-201ENST00000392185 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
SNX9-201ENST00000392185 CITED1Q99966 193 aa11.64□□□□□ -0.55
SNX9-201ENST00000392185 FOXI1Q12951 378 aa11.63□□□□□ -0.55
SNX9-201ENST00000392185 HIGD2AQ9BW72 106 aa11.63□□□□□ -0.55
SNX9-201ENST00000392185 H3BT86 120 aa11.62□□□□□ -0.55
SNX9-201ENST00000392185 X6R8D5 127 aa11.62□□□□□ -0.55
SNX9-201ENST00000392185 KRTAP1-1Q07627 177 aa11.62□□□□□ -0.55
SNX9-201ENST00000392185 FAM19A5Q7Z5A7 132 aaPredicted RBP11.62□□□□□ -0.55
SNX9-201ENST00000392185 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
SNX9-201ENST00000392185 COX7BP24311 80 aa11.61□□□□□ -0.55
SNX9-201ENST00000392185 UBE2AP49459 152 aa11.61□□□□□ -0.55
SNX9-201ENST00000392185 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
SNX9-201ENST00000392185 CSDC2Q9Y534 153 aaKnown RBP11.61□□□□□ -0.55
SNX9-201ENST00000392185 A0A087WZ39 114 aa11.61□□□□□ -0.55
SNX9-201ENST00000392185 CDK2AP2O75956 126 aa11.6□□□□□ -0.55
SNX9-201ENST00000392185 IGKV2-28A0A075B6P5 120 aa11.6□□□□□ -0.55
SNX9-201ENST00000392185 TIMM17BO60830 172 aa11.6□□□□□ -0.55
SNX9-201ENST00000392185 IGKV2D-28P01615 120 aa11.6□□□□□ -0.55
SNX9-201ENST00000392185 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
SNX9-201ENST00000392185 SPANXDQ9BXN6 97 aa11.6□□□□□ -0.55
SNX9-201ENST00000392185 TEX49A0A1B0GTD5 131 aa11.59□□□□□ -0.55
SNX9-201ENST00000392185 Q8IZM0 81 aa11.59□□□□□ -0.55
SNX9-201ENST00000392185 LYPD5Q6UWN5 251 aa11.59□□□□□ -0.55
SNX9-201ENST00000392185 C14orf132Q9NPU4 83 aa11.59□□□□□ -0.55
SNX9-201ENST00000392185 IGKV3D-7A0A0C4DH55 119 aa11.58□□□□□ -0.56
SNX9-201ENST00000392185 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
SNX9-201ENST00000392185 UTP20O75691 2785 aaKnown RBP11.57□□□□□ -0.56
SNX9-201ENST00000392185 hADV29S1A0JD25 119 aa11.57□□□□□ -0.56
SNX9-201ENST00000392185 A0A096LNI7 61 aa11.57□□□□□ -0.56
SNX9-201ENST00000392185 C14orf177Q52M58 125 aa11.57□□□□□ -0.56
SNX9-201ENST00000392185 KRTAP10-3P60369 221 aa11.57□□□□□ -0.56
SNX9-201ENST00000392185 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
SNX9-201ENST00000392185 LY6G6CO95867 125 aa11.56□□□□□ -0.56
SNX9-201ENST00000392185 TRBV30A0A0K0K1B3 111 aa11.56□□□□□ -0.56
SNX9-201ENST00000392185 RBM3P98179 157 aaKnown RBP11.54□□□□□ -0.56
SNX9-201ENST00000392185 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
SNX9-201ENST00000392185 SMIM11BQ8TCY0 68 aa11.54□□□□□ -0.56
SNX9-201ENST00000392185 A0A1B0GUV1 79 aa11.54□□□□□ -0.56
SNX9-201ENST00000392185 TRACP01848 142 aa11.53□□□□□ -0.56
SNX9-201ENST00000392185 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNX9-201ENST00000392185 TMEM256-PLSCR3K7ERE1 68 aa11.53□□□□□ -0.56
SNX9-201ENST00000392185 PKIGQ9Y2B9 76 aa11.53□□□□□ -0.56
SNX9-201ENST00000392185 Q8N3U1 123 aa11.53□□□□□ -0.56
SNX9-201ENST00000392185 WFDC9Q8NEX5 89 aa11.53□□□□□ -0.56
SNX9-201ENST00000392185 RPL37AP8A6NKH3 93 aa11.52□□□□□ -0.57
SNX9-201ENST00000392185 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.57
SNX9-201ENST00000392185 CR1P17927 2039 aa11.51□□□□□ -0.57
SNX9-201ENST00000392185 FAM19A1Q7Z5A9 133 aa11.51□□□□□ -0.57
SNX9-201ENST00000392185 Q6ZQY7 126 aa11.5□□□□□ -0.57
SNX9-201ENST00000392185 NSD1Q96L73 2696 aaPredicted RBP11.5□□□□□ -0.57
SNX9-201ENST00000392185 LINC01546A6NGU7 62 aa11.49□□□□□ -0.57
SNX9-201ENST00000392185 IGHV3OR16-9A0A0B4J2B5 98 aa11.49□□□□□ -0.57
SNX9-201ENST00000392185 TRAV23DV6A0A075B6W5 121 aa11.49□□□□□ -0.57
SNX9-201ENST00000392185 Q8NAQ8 132 aa11.48□□□□□ -0.57
SNX9-201ENST00000392185 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
SNX9-201ENST00000392185 ESRGQ1W209 222 aa11.48□□□□□ -0.57
SNX9-201ENST00000392185 ACYP1P07311 99 aa11.48□□□□□ -0.57
SNX9-201ENST00000392185 LST1O00453 97 aa11.47□□□□□ -0.57
SNX9-201ENST00000392185 NREPQ16612 68 aa11.47□□□□□ -0.57
SNX9-201ENST00000392185 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
SNX9-201ENST00000392185 GIG44P09565 113 aaPredicted RBP11.46□□□□□ -0.57
SNX9-201ENST00000392185 CSNK1G2-AS1Q8NCQ2 148 aa11.45□□□□□ -0.58
SNX9-201ENST00000392185 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
SNX9-201ENST00000392185 A8MTW9 85 aa11.44□□□□□ -0.58
SNX9-201ENST00000392185 M0R378 163 aa11.44□□□□□ -0.58
SNX9-201ENST00000392185 COX17Q14061 63 aa11.44□□□□□ -0.58
SNX9-201ENST00000392185 EGFEM1PQ0D2K5 195 aa11.44□□□□□ -0.58
SNX9-201ENST00000392185 C9orf153Q5TBE3 101 aa11.44□□□□□ -0.58
SNX9-201ENST00000392185 CRYBG3Q68DQ2 2970 aa11.43□□□□□ -0.58
SNX9-201ENST00000392185 NUPR2A6NF83 97 aa11.42□□□□□ -0.58
SNX9-201ENST00000392185 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
SNX9-201ENST00000392185 APCP25054 2843 aa11.42□□□□□ -0.58
SNX9-201ENST00000392185 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
SNX9-201ENST00000392185 PPDPFQ9H3Y8 114 aa11.42□□□□□ -0.58
SNX9-201ENST00000392185 IGLV5-39A0A0G2JS06 123 aa11.41□□□□□ -0.58
SNX9-201ENST00000392185 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
SNX9-201ENST00000392185 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
SNX9-201ENST00000392185 Q6ZRU5 148 aa11.4□□□□□ -0.58
SNX9-201ENST00000392185 ASH1LQ9NR48 2969 aaKnown RBP11.39□□□□□ -0.59
SNX9-201ENST00000392185 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
SNX9-201ENST00000392185 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
SNX9-201ENST00000392185 WDFY3Q8IZQ1 3526 aa11.39□□□□□ -0.59
SNX9-201ENST00000392185 HIVEP1P15822 2718 aa11.39□□□□□ -0.59
SNX9-201ENST00000392185 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
SNX9-201ENST00000392185 B9D2Q9BPU9 175 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms