RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
TRAPPC9-201ENST00000389328 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-201ENST00000389328 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
TRAPPC9-201ENST00000389328 MAP1AP78559 2803 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC9-201ENST00000389328 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-201ENST00000389328 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
TRAPPC9-201ENST00000389328 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
TRAPPC9-201ENST00000389328 HILS1P60008 231 aa9.36□□□□□ -0.91
TRAPPC9-201ENST00000389328 PLA2G2AP14555 144 aa9.35□□□□□ -0.91
TRAPPC9-201ENST00000389328 A0A087WZ39 114 aa9.35□□□□□ -0.91
TRAPPC9-201ENST00000389328 NTM-AS1Q6ZSK4 140 aa9.35□□□□□ -0.91
TRAPPC9-201ENST00000389328 Q8N814 137 aa9.35□□□□□ -0.91
TRAPPC9-201ENST00000389328 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 LINC00482Q8N8I6 264 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 C11orf72Q8NBR9 251 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 EYSQ5T1H1 3165 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 BPY2O14599 106 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 UBE2BP63146 152 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
TRAPPC9-201ENST00000389328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-201ENST00000389328 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
TRAPPC9-201ENST00000389328 ANKRD17O75179 2603 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-201ENST00000389328 H3BQ85 93 aa9.33□□□□□ -0.92
TRAPPC9-201ENST00000389328 Q8IZM0 81 aa9.33□□□□□ -0.92
TRAPPC9-201ENST00000389328 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 CENPEQ02224 2701 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 A8MTW9 85 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 IGLV5-45A0A087WSX0 123 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 C3orf84H3BNL1 204 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 KLK9Q2XQG4 91 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 UNQ6190/PRO20217Q6UXQ8 127 aa9.31□□□□□ -0.92
TRAPPC9-201ENST00000389328 C9orf66Q5T8R8 295 aa9.3□□□□□ -0.92
TRAPPC9-201ENST00000389328 PSCAO43653 123 aa9.29□□□□□ -0.92
TRAPPC9-201ENST00000389328 BOD1L1Q8NFC6 3051 aa9.29□□□□□ -0.92
TRAPPC9-201ENST00000389328 KIR2DL5BQ8NHK3 375 aa9.29□□□□□ -0.92
TRAPPC9-201ENST00000389328 REV3LO60673 3130 aa9.29□□□□□ -0.92
TRAPPC9-201ENST00000389328 FHL2Q14192 279 aa9.28□□□□□ -0.92
TRAPPC9-201ENST00000389328 CYSRT1A8MQ03 144 aa9.27□□□□□ -0.93
TRAPPC9-201ENST00000389328 CRYGAP11844 174 aa9.27□□□□□ -0.93
TRAPPC9-201ENST00000389328 LINC01006Q8NI28 216 aa9.27□□□□□ -0.93
TRAPPC9-201ENST00000389328 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
TRAPPC9-201ENST00000389328 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
TRAPPC9-201ENST00000389328 TRAV7A0A075B6U4 112 aa9.26□□□□□ -0.93
TRAPPC9-201ENST00000389328 LYRM9A8MSI8 78 aa9.26□□□□□ -0.93
TRAPPC9-201ENST00000389328 ZNF843Q8N446 348 aa9.26□□□□□ -0.93
TRAPPC9-201ENST00000389328 SPTBN5Q9NRC6 3674 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-201ENST00000389328 COX17Q14061 63 aa9.25□□□□□ -0.93
TRAPPC9-201ENST00000389328 Q8N3U1 123 aa9.25□□□□□ -0.93
TRAPPC9-201ENST00000389328 USP24Q9UPU5 2620 aa9.24□□□□□ -0.93
TRAPPC9-201ENST00000389328 ZNF73O43830 326 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC9-201ENST00000389328 KRTAP10-9P60411 292 aa9.24□□□□□ -0.93
TRAPPC9-201ENST00000389328 ADGRG4Q8IZF6 3080 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 TRBV10-3A0A0K0K1G6 114 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 C6orf223Q8N319 242 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 KALRNO60229 2985 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
TRAPPC9-201ENST00000389328 USP34Q70CQ2 3546 aa9.22□□□□□ -0.93
TRAPPC9-201ENST00000389328 COL6A3P12111 3177 aa9.22□□□□□ -0.93
TRAPPC9-201ENST00000389328 MIFP14174 115 aa9.22□□□□□ -0.93
TRAPPC9-201ENST00000389328 RMI2Q96E14 147 aa9.22□□□□□ -0.93
TRAPPC9-201ENST00000389328 MP68P56378 58 aa9.21□□□□□ -0.93
TRAPPC9-201ENST00000389328 Q6ZVQ6 151 aa9.21□□□□□ -0.94
TRAPPC9-201ENST00000389328 NDUFC1O43677 76 aa9.21□□□□□ -0.94
TRAPPC9-201ENST00000389328 PRR4Q16378 134 aa9.21□□□□□ -0.94
TRAPPC9-201ENST00000389328 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
TRAPPC9-201ENST00000389328 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
TRAPPC9-201ENST00000389328 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
TRAPPC9-201ENST00000389328 CDK2AP2O75956 126 aa9.2□□□□□ -0.94
TRAPPC9-201ENST00000389328 CELA1Q9UNI1 258 aa9.2□□□□□ -0.94
TRAPPC9-201ENST00000389328 C4orf26Q17RF5 130 aa9.19□□□□□ -0.94
TRAPPC9-201ENST00000389328 LINC01547P58512 204 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC9-201ENST00000389328 LINC00575Q6W349 94 aa9.19□□□□□ -0.94
TRAPPC9-201ENST00000389328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC9-201ENST00000389328 IGLV1-51P01701 117 aa9.18□□□□□ -0.94
TRAPPC9-201ENST00000389328 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
TRAPPC9-201ENST00000389328 M0R378 163 aa9.17□□□□□ -0.94
TRAPPC9-201ENST00000389328 LELP1Q5T871 98 aa9.17□□□□□ -0.94
TRAPPC9-201ENST00000389328 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
TRAPPC9-201ENST00000389328 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.94
TRAPPC9-201ENST00000389328 Q8N9L7 120 aa9.15□□□□□ -0.94
TRAPPC9-201ENST00000389328 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-201ENST00000389328 SYCNQ0VAF6 134 aa9.15□□□□□ -0.95
TRAPPC9-201ENST00000389328 TACC2O95359 2948 aa9.14□□□□□ -0.95
TRAPPC9-201ENST00000389328 MUC7Q8TAX7 377 aa9.14□□□□□ -0.95
TRAPPC9-201ENST00000389328 HIGD2AQ9BW72 106 aa9.14□□□□□ -0.95
TRAPPC9-201ENST00000389328 CFAP47Q6ZTR5 3102 aa9.14□□□□□ -0.95
TRAPPC9-201ENST00000389328 F8P00451 2351 aa9.14□□□□□ -0.95
TRAPPC9-201ENST00000389328 NDUFS5O43920 106 aa9.14□□□□□ -0.95
TRAPPC9-201ENST00000389328 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
TRAPPC9-201ENST00000389328 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
TRAPPC9-201ENST00000389328 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC9-201ENST00000389328 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
TRAPPC9-201ENST00000389328 ZNF292O60281 2723 aa9.13□□□□□ -0.95
TRAPPC9-201ENST00000389328 AKAP13Q12802 2813 aa9.12□□□□□ -0.95
TRAPPC9-201ENST00000389328 A0A096LNI7 61 aa9.12□□□□□ -0.95
TRAPPC9-201ENST00000389328 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-201ENST00000389328 WFDC10BQ8IUB3 73 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms