RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 KRTAP1-1Q07627 177 aa13.71□□□□□ -0.21
FOXC1-201ENST00000380874 C19orf73Q9NVV2 129 aa13.71□□□□□ -0.21
FOXC1-201ENST00000380874 APOC4P55056 127 aa13.71□□□□□ -0.22
FOXC1-201ENST00000380874 SMIM20Q8N5G0 67 aa13.7□□□□□ -0.22
FOXC1-201ENST00000380874 CCL18P55774 89 aa13.7□□□□□ -0.22
FOXC1-201ENST00000380874 LECT2O14960 151 aa13.69□□□□□ -0.22
FOXC1-201ENST00000380874 CSNK1G2-AS1Q8NCQ2 148 aa13.69□□□□□ -0.22
FOXC1-201ENST00000380874 S100A7L2Q5SY68 101 aa13.68□□□□□ -0.22
FOXC1-201ENST00000380874 LINC00526Q96FQ7 95 aa13.67□□□□□ -0.22
FOXC1-201ENST00000380874 SLPIP03973 132 aa13.66□□□□□ -0.22
FOXC1-201ENST00000380874 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
FOXC1-201ENST00000380874 SMIM11BQ8TCY0 68 aa13.66□□□□□ -0.22
FOXC1-201ENST00000380874 IGHV3OR16-9A0A0B4J2B5 98 aa13.66□□□□□ -0.22
FOXC1-201ENST00000380874 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
FOXC1-201ENST00000380874 IGHV4-28A0A0C4DH34 117 aa13.65□□□□□ -0.22
FOXC1-201ENST00000380874 IBA57-AS1B1ANH7 110 aa13.65□□□□□ -0.22
FOXC1-201ENST00000380874 A0A087WZ39 114 aa13.65□□□□□ -0.22
FOXC1-201ENST00000380874 CHCHD10Q8WYQ3 142 aaPredicted RBP13.64□□□□□ -0.23
FOXC1-201ENST00000380874 SVIPQ8NHG7 77 aa13.64□□□□□ -0.23
FOXC1-201ENST00000380874 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
FOXC1-201ENST00000380874 KRTAP10-3P60369 221 aa13.63□□□□□ -0.23
FOXC1-201ENST00000380874 PRR3P79522 188 aaKnown RBP13.63□□□□□ -0.23
FOXC1-201ENST00000380874 REG3AQ06141 175 aa13.63□□□□□ -0.23
FOXC1-201ENST00000380874 INAFM2P0DMQ5 153 aa13.63□□□□□ -0.23
FOXC1-201ENST00000380874 Q8N3U1 123 aa13.63□□□□□ -0.23
FOXC1-201ENST00000380874 KIR2DL5BQ8NHK3 375 aa13.63□□□□□ -0.23
FOXC1-201ENST00000380874 FAM218AQ96MZ4 157 aa13.62□□□□□ -0.23
FOXC1-201ENST00000380874 SPART-AS1P0CW21 52 aa13.61□□□□□ -0.23
FOXC1-201ENST00000380874 TRACP01848 142 aa13.61□□□□□ -0.23
FOXC1-201ENST00000380874 SMIM9A6NGZ8 99 aa13.61□□□□□ -0.23
FOXC1-201ENST00000380874 C9orf116Q5BN46 136 aaPredicted RBP13.61□□□□□ -0.23
FOXC1-201ENST00000380874 NCR3O14931 201 aa13.6□□□□□ -0.23
FOXC1-201ENST00000380874 SPATA3Q8NHX4 192 aa13.6□□□□□ -0.23
FOXC1-201ENST00000380874 C14orf132Q9NPU4 83 aa13.6□□□□□ -0.23
FOXC1-201ENST00000380874 X6R8D5 127 aa13.6□□□□□ -0.23
FOXC1-201ENST00000380874 LYRM9A8MSI8 78 aa13.59□□□□□ -0.23
FOXC1-201ENST00000380874 M0QXV9 152 aa13.59□□□□□ -0.23
FOXC1-201ENST00000380874 MRPL23Q16540 153 aaKnown RBP13.59□□□□□ -0.23
FOXC1-201ENST00000380874 NDUFV3P56181 108 aaKnown RBP13.59□□□□□ -0.23
FOXC1-201ENST00000380874 A0A087WYN8 130 aa13.58□□□□□ -0.23
FOXC1-201ENST00000380874 H0YGX0 51 aa13.58□□□□□ -0.23
FOXC1-201ENST00000380874 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
FOXC1-201ENST00000380874 MRAPQ8TCY5 172 aa13.58□□□□□ -0.24
FOXC1-201ENST00000380874 SPAG11BQ08648 103 aa13.56□□□□□ -0.24
FOXC1-201ENST00000380874 RPL28P46779 137 aaKnown RBP13.55□□□□□ -0.24
FOXC1-201ENST00000380874 IGKV2-28A0A075B6P5 120 aa13.55□□□□□ -0.24
FOXC1-201ENST00000380874 IGKV2D-28P01615 120 aa13.55□□□□□ -0.24
FOXC1-201ENST00000380874 C9orf153Q5TBE3 101 aa13.55□□□□□ -0.24
FOXC1-201ENST00000380874 CELA1Q9UNI1 258 aa13.55□□□□□ -0.24
FOXC1-201ENST00000380874 FAM236AA0A1B0GUQ0 79 aa13.54□□□□□ -0.24
FOXC1-201ENST00000380874 FAM236BA0A1B0GV22 79 aa13.54□□□□□ -0.24
FOXC1-201ENST00000380874 FAM19A3Q7Z5A8 133 aa13.54□□□□□ -0.24
FOXC1-201ENST00000380874 CD164L2Q6UWJ8 174 aa13.53□□□□□ -0.24
FOXC1-201ENST00000380874 ACYP1P07311 99 aa13.53□□□□□ -0.24
FOXC1-201ENST00000380874 TENM4Q6N022 2769 aa13.53□□□□□ -0.24
FOXC1-201ENST00000380874 ORMDL1Q9P0S3 153 aa13.53□□□□□ -0.24
FOXC1-201ENST00000380874 IGKV3D-7A0A0C4DH55 119 aa13.52□□□□□ -0.25
FOXC1-201ENST00000380874 Q8IZM0 81 aa13.52□□□□□ -0.25
FOXC1-201ENST00000380874 HIVEP1P15822 2718 aa13.5□□□□□ -0.25
FOXC1-201ENST00000380874 IGHV4-30-4P0DP06 118 aa13.5□□□□□ -0.25
FOXC1-201ENST00000380874 LAMTOR3Q9UHA4 124 aa13.5□□□□□ -0.25
FOXC1-201ENST00000380874 CITED1Q99966 193 aa13.5□□□□□ -0.25
FOXC1-201ENST00000380874 A0A1B0GUV1 79 aa13.49□□□□□ -0.25
FOXC1-201ENST00000380874 C6orf223Q8N319 242 aa13.49□□□□□ -0.25
FOXC1-201ENST00000380874 OXLD1Q5BKU9 147 aa13.49□□□□□ -0.25
FOXC1-201ENST00000380874 NBPF19A0A087WUL8 3843 aa13.49□□□□□ -0.25
FOXC1-201ENST00000380874 UNQ6190/PRO20217Q6UXQ8 127 aa13.49□□□□□ -0.25
FOXC1-201ENST00000380874 ZNF561-AS1K7EIQ3 104 aa13.48□□□□□ -0.25
FOXC1-201ENST00000380874 HIST1H4AP62805 103 aaKnown RBP13.48□□□□□ -0.25
FOXC1-201ENST00000380874 RPL18AQ02543 176 aaKnown RBP13.48□□□□□ -0.25
FOXC1-201ENST00000380874 HIGD2BQ4VC39 106 aa13.48□□□□□ -0.25
FOXC1-201ENST00000380874 TMEM126AQ9H061 195 aa13.48□□□□□ -0.25
FOXC1-201ENST00000380874 XAGE1AQ9HD64 81 aa13.48□□□□□ -0.25
FOXC1-201ENST00000380874 RETNQ9HD89 108 aa13.48□□□□□ -0.25
FOXC1-201ENST00000380874 MIFP14174 115 aa13.47□□□□□ -0.25
FOXC1-201ENST00000380874 CCDC179H3BU77 68 aa13.47□□□□□ -0.25
FOXC1-201ENST00000380874 C6orf99Q4VX62 202 aa13.47□□□□□ -0.25
FOXC1-201ENST00000380874 LINC00643Q86TS7 51 aa13.46□□□□□ -0.25
FOXC1-201ENST00000380874 CXCL5P42830 114 aa13.46□□□□□ -0.26
FOXC1-201ENST00000380874 FAM240AA0A1B0GVK7 77 aa13.45□□□□□ -0.26
FOXC1-201ENST00000380874 PRB2P02812 416 aaPredicted RBP13.45□□□□□ -0.26
FOXC1-201ENST00000380874 ZNF469Q96JG9 3925 aaPredicted RBP13.44□□□□□ -0.26
FOXC1-201ENST00000380874 SDIM1Q6ZPB5 146 aa13.44□□□□□ -0.26
FOXC1-201ENST00000380874 CYSRT1A8MQ03 144 aa13.42□□□□□ -0.26
FOXC1-201ENST00000380874 LELP1Q5T871 98 aa13.41□□□□□ -0.26
FOXC1-201ENST00000380874 CAMK2N2Q96S95 79 aa13.41□□□□□ -0.26
FOXC1-201ENST00000380874 IGKV2D-24A0A075B6R9 120 aa13.39□□□□□ -0.27
FOXC1-201ENST00000380874 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
FOXC1-201ENST00000380874 NSD1Q96L73 2696 aaPredicted RBP13.38□□□□□ -0.27
FOXC1-201ENST00000380874 LINC00612Q8N6U2 182 aa13.38□□□□□ -0.27
FOXC1-201ENST00000380874 Q6Q795 121 aa13.37□□□□□ -0.27
FOXC1-201ENST00000380874 Q8NAQ8 132 aa13.36□□□□□ -0.27
FOXC1-201ENST00000380874 KPRPQ5T749 579 aaPredicted RBP13.36□□□□□ -0.27
FOXC1-201ENST00000380874 VWFP04275 2813 aa13.35□□□□□ -0.27
FOXC1-201ENST00000380874 C9orf129Q5T035 196 aaKnown RBP13.35□□□□□ -0.27
FOXC1-201ENST00000380874 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
FOXC1-201ENST00000380874 PDZD2O15018 2839 aa13.35□□□□□ -0.27
FOXC1-201ENST00000380874 C1orf43Q9BWL3 253 aa13.33□□□□□ -0.27
FOXC1-201ENST00000380874 TMEM256-PLSCR3K7ERE1 68 aa13.33□□□□□ -0.28
FOXC1-201ENST00000380874 WFDC10BQ8IUB3 73 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms