RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 C16orf95Q9H693 158 aa5.69□□□□□ -1.5
CKAP2-203ENST00000378037 X6R8D5 127 aa5.69□□□□□ -1.5
CKAP2-203ENST00000378037 A0A096LNI7 61 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 TRBV6-5A0A0K0K1A5 114 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 TCL1BO95988 128 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 BEAN1Q3B7T3 259 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 UNQ6190/PRO20217Q6UXQ8 127 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 MDFIQ99750 246 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 SS18L2Q9UHA2 77 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 FOXI1Q12951 378 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 SIVA1O15304 175 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
CKAP2-203ENST00000378037 LINC00959A0A1B0GUT2 108 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 TRBV6-4A0A1B0GX49 114 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 UBE2D1P51668 147 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 SLC25A20O43772 301 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 LAMTOR3Q9UHA4 124 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 GAGE2AQ6NT46 116 aa5.67□□□□□ -1.5
CKAP2-203ENST00000378037 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.66□□□□□ -1.5
CKAP2-203ENST00000378037 CITED1Q99966 193 aa5.66□□□□□ -1.5
CKAP2-203ENST00000378037 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
CKAP2-203ENST00000378037 TEX49A0A1B0GTD5 131 aa5.65□□□□□ -1.5
CKAP2-203ENST00000378037 TRIAP1O43715 76 aa5.65□□□□□ -1.5
CKAP2-203ENST00000378037 CCL18P55774 89 aa5.65□□□□□ -1.5
CKAP2-203ENST00000378037 MIFP14174 115 aa5.64□□□□□ -1.51
CKAP2-203ENST00000378037 LINC00308Q8TCZ7 52 aa5.64□□□□□ -1.51
CKAP2-203ENST00000378037 RPL37AP8A6NKH3 93 aa5.64□□□□□ -1.51
CKAP2-203ENST00000378037 TTC32Q5I0X7 151 aa5.64□□□□□ -1.51
CKAP2-203ENST00000378037 PLAC8L1A1L4L8 177 aa5.63□□□□□ -1.51
CKAP2-203ENST00000378037 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
CKAP2-203ENST00000378037 OVOL2Q9BRP0 275 aa5.63□□□□□ -1.51
CKAP2-203ENST00000378037 LYRM9A8MSI8 78 aa5.63□□□□□ -1.51
CKAP2-203ENST00000378037 MRPS36P82909 103 aaKnown RBP5.63□□□□□ -1.51
CKAP2-203ENST00000378037 CSNK1G2-AS1Q8NCQ2 148 aa5.63□□□□□ -1.51
CKAP2-203ENST00000378037 ATXN8Q156A1 80 aa5.62□□□□□ -1.51
CKAP2-203ENST00000378037 C10orf25Q5T742 122 aa5.62□□□□□ -1.51
CKAP2-203ENST00000378037 MIAQ16674 131 aa5.62□□□□□ -1.51
CKAP2-203ENST00000378037 RNF183Q96D59 192 aa5.62□□□□□ -1.51
CKAP2-203ENST00000378037 TM2D2Q9BX73 214 aa5.62□□□□□ -1.51
CKAP2-203ENST00000378037 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
CKAP2-203ENST00000378037 HIGD1BQ9P298 99 aa5.61□□□□□ -1.51
CKAP2-203ENST00000378037 ESRGQ1W209 222 aa5.61□□□□□ -1.51
CKAP2-203ENST00000378037 TRBV20-1A0A075B6N2 111 aa5.61□□□□□ -1.51
CKAP2-203ENST00000378037 SNCGO76070 127 aa5.61□□□□□ -1.51
CKAP2-203ENST00000378037 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
CKAP2-203ENST00000378037 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
CKAP2-203ENST00000378037 BAALC-AS2P0C853 105 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 KLK9Q2XQG4 91 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 C15orf53Q8NAA6 179 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 Q8NAQ8 132 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 AMELXQ99217 191 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 C6orf99Q4VX62 202 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 PYGO1Q9Y3Y4 419 aa5.6□□□□□ -1.51
CKAP2-203ENST00000378037 LYPD5Q6UWN5 251 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 SOSTDC1Q6X4U4 206 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 C14orf132Q9NPU4 83 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 TRAV8-4A0A0B4J246 113 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 SMIM9A6NGZ8 99 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 HAMPP81172 84 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 SMIM20Q8N5G0 67 aa5.59□□□□□ -1.51
CKAP2-203ENST00000378037 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.52
CKAP2-203ENST00000378037 M0QXV9 152 aa5.59□□□□□ -1.52
CKAP2-203ENST00000378037 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.52
CKAP2-203ENST00000378037 SPATA25Q9BR10 227 aa5.59□□□□□ -1.52
CKAP2-203ENST00000378037 KLK5Q9Y337 293 aaPredicted RBP5.59□□□□□ -1.52
CKAP2-203ENST00000378037 LY6G6CO95867 125 aa5.58□□□□□ -1.52
CKAP2-203ENST00000378037 SCGB1A1P11684 91 aa5.58□□□□□ -1.52
CKAP2-203ENST00000378037 UBE2BP63146 152 aa5.58□□□□□ -1.52
CKAP2-203ENST00000378037 TAL2Q16559 108 aa5.58□□□□□ -1.52
CKAP2-203ENST00000378037 KIR2DL5BQ8NHK3 375 aa5.58□□□□□ -1.52
CKAP2-203ENST00000378037 IGKV3D-7A0A0C4DH55 119 aa5.57□□□□□ -1.52
CKAP2-203ENST00000378037 LRCOL1A6NCL2 159 aa5.57□□□□□ -1.52
CKAP2-203ENST00000378037 NDUFA1O15239 70 aa5.57□□□□□ -1.52
CKAP2-203ENST00000378037 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
CKAP2-203ENST00000378037 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
CKAP2-203ENST00000378037 K7EIL1 84 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 SCXQ7RTU7 201 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 SMIM11BQ8TCY0 68 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 IGHV3OR16-9A0A0B4J2B5 98 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 LELP1Q5T871 98 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 SIGMAR1Q99720 223 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 UFSP1Q6NVU6 142 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 CD164L2Q6UWJ8 174 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
CKAP2-203ENST00000378037 F8W1H4 67 aa5.55□□□□□ -1.52
CKAP2-203ENST00000378037 TIRAPP58753 221 aa5.55□□□□□ -1.52
CKAP2-203ENST00000378037 ANK3Q12955 4377 aaKnown RBP5.55□□□□□ -1.52
CKAP2-203ENST00000378037 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
CKAP2-203ENST00000378037 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
CKAP2-203ENST00000378037 TRAV13-2A0A0B4J235 113 aa5.54□□□□□ -1.52
CKAP2-203ENST00000378037 SPANXCQ9NY87 97 aa5.54□□□□□ -1.52
CKAP2-203ENST00000378037 A0A087WYN8 130 aa5.54□□□□□ -1.52
CKAP2-203ENST00000378037 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
CKAP2-203ENST00000378037 Q6ZRU5 148 aa5.54□□□□□ -1.52
CKAP2-203ENST00000378037 PPDPFLQ8WWR9 84 aa5.53□□□□□ -1.52
CKAP2-203ENST00000378037 A0A087WZ39 114 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms