RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CLEC2BQ92478 149 aa6.63□□□□□ -1.35
TRIM39-202ENST00000376659 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
TRIM39-202ENST00000376659 TEX49A0A1B0GTD5 131 aa6.62□□□□□ -1.35
TRIM39-202ENST00000376659 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
TRIM39-202ENST00000376659 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
TRIM39-202ENST00000376659 TRAV13-1A0A0B4J241 112 aa6.62□□□□□ -1.35
TRIM39-202ENST00000376659 A0A1B0GUV1 79 aa6.62□□□□□ -1.35
TRIM39-202ENST00000376659 LINC00526Q96FQ7 95 aa6.62□□□□□ -1.35
TRIM39-202ENST00000376659 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
TRIM39-202ENST00000376659 H3BT86 120 aa6.61□□□□□ -1.35
TRIM39-202ENST00000376659 hADV29S1A0JD25 119 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 TRACP01848 142 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 MALP21145 153 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 Q8NAQ8 132 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 COX7B2Q8TF08 81 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 H7C2G1 150 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 COX7A2LO14548 114 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 DNAH7Q8WXX0 4024 aa6.6□□□□□ -1.35
TRIM39-202ENST00000376659 FAM222AQ5U5X8 452 aa6.59□□□□□ -1.35
TRIM39-202ENST00000376659 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
TRIM39-202ENST00000376659 TRGV2A0A075B6R0 118 aa6.59□□□□□ -1.36
TRIM39-202ENST00000376659 KIAA0087Q14695 138 aa6.59□□□□□ -1.36
TRIM39-202ENST00000376659 DNAH9Q9NYC9 4486 aa6.58□□□□□ -1.36
TRIM39-202ENST00000376659 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
TRIM39-202ENST00000376659 FAM236DA0A1B0GTK5 79 aa6.58□□□□□ -1.36
TRIM39-202ENST00000376659 FAM236CP0DP71 79 aa6.58□□□□□ -1.36
TRIM39-202ENST00000376659 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
TRIM39-202ENST00000376659 LINC00336Q6ZUF6 198 aa6.58□□□□□ -1.36
TRIM39-202ENST00000376659 CELA1Q9UNI1 258 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 FBN1P35555 2871 aaKnown RBP6.57□□□□□ -1.36
TRIM39-202ENST00000376659 TRGV4A0A0C4DH28 118 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 A0A0U1RQV1 116 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 PRSS2P07478 247 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
TRIM39-202ENST00000376659 Q5XG85 94 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 OBSCN-AS1Q96MR7 158 aa6.57□□□□□ -1.36
TRIM39-202ENST00000376659 FASNP49327 2511 aaKnown RBP6.57□□□□□ -1.36
TRIM39-202ENST00000376659 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 Q8N3U1 123 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 Q8NDZ9 215 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 UBE2WQ96B02 151 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 LYRM9A8MSI8 78 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 COX7CP15954 63 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 PKD1L1Q8TDX9 2849 aa6.56□□□□□ -1.36
TRIM39-202ENST00000376659 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 UBE2L6O14933 153 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 CCL18P55774 89 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 OXTP01178 125 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 PFN2P35080 140 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 Q1RN00 199 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 Q8IZM0 81 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 INAFM1C9JVW0 142 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 PF4P02776 101 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 GYPEP15421 78 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 WFDC9Q8NEX5 89 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
TRIM39-202ENST00000376659 IGHV4-28A0A0C4DH34 117 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 CIRBPQ14011 172 aaKnown RBP6.54□□□□□ -1.36
TRIM39-202ENST00000376659 C9orf66Q5T8R8 295 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 C1orf195Q5TG92 126 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 SS18Q15532 418 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 C2orf82Q6UX34 121 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
TRIM39-202ENST00000376659 TEP1Q99973 2627 aaKnown RBP6.53□□□□□ -1.36
TRIM39-202ENST00000376659 C9orf129Q5T035 196 aaKnown RBP6.53□□□□□ -1.36
TRIM39-202ENST00000376659 CRYGAP11844 174 aa6.53□□□□□ -1.36
TRIM39-202ENST00000376659 TMEM258P61165 79 aa6.53□□□□□ -1.36
TRIM39-202ENST00000376659 COPS9Q8WXC6 57 aa6.53□□□□□ -1.36
TRIM39-202ENST00000376659 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 PRR34Q9NV39 138 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 A0A087WYN8 130 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 CYSTM1Q9H1C7 97 aa6.52□□□□□ -1.37
TRIM39-202ENST00000376659 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
TRIM39-202ENST00000376659 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
TRIM39-202ENST00000376659 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
TRIM39-202ENST00000376659 DEFB135Q30KP9 77 aa6.5□□□□□ -1.37
TRIM39-202ENST00000376659 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
TRIM39-202ENST00000376659 PRKDCP78527 4128 aaKnown RBP6.5□□□□□ -1.37
TRIM39-202ENST00000376659 COX6CP09669 75 aa6.5□□□□□ -1.37
TRIM39-202ENST00000376659 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
TRIM39-202ENST00000376659 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
TRIM39-202ENST00000376659 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
TRIM39-202ENST00000376659 ATP5G1P05496 136 aa6.49□□□□□ -1.37
TRIM39-202ENST00000376659 MIFP14174 115 aa6.49□□□□□ -1.37
TRIM39-202ENST00000376659 A0A096LPF7 62 aa6.48□□□□□ -1.37
TRIM39-202ENST00000376659 BRK1Q8WUW1 75 aa6.48□□□□□ -1.37
TRIM39-202ENST00000376659 KRTAP10-11P60412 298 aa6.48□□□□□ -1.37
TRIM39-202ENST00000376659 DEFB4AO15263 64 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms