RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 A0A0U1RRA0 63 aa11.79□□□□□ -0.52
UBE3D-203ENST00000369747 CLPSL2Q6UWE3 100 aa11.79□□□□□ -0.52
UBE3D-203ENST00000369747 Q8N3U1 123 aa11.79□□□□□ -0.52
UBE3D-203ENST00000369747 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
UBE3D-203ENST00000369747 H7C2G1 150 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 PSMB2P49721 201 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 SS18Q15532 418 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 MEIG1Q5JSS6 88 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 LYPD5Q6UWN5 251 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 C15orf53Q8NAA6 179 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 TOMM7Q9P0U1 55 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 TCL1BO95988 128 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 WFDC2Q14508 124 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
UBE3D-203ENST00000369747 XCL1P47992 114 aa11.77□□□□□ -0.53
UBE3D-203ENST00000369747 ESRGQ1W209 222 aa11.77□□□□□ -0.53
UBE3D-203ENST00000369747 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.53
UBE3D-203ENST00000369747 MTURNQ8N3F0 131 aa11.77□□□□□ -0.53
UBE3D-203ENST00000369747 MUC7Q8TAX7 377 aa11.77□□□□□ -0.53
UBE3D-203ENST00000369747 LINC00269Q8N2A0 174 aa11.76□□□□□ -0.53
UBE3D-203ENST00000369747 LELP1Q5T871 98 aa11.76□□□□□ -0.53
UBE3D-203ENST00000369747 SCGB1C2P0DMR2 95 aa11.75□□□□□ -0.53
UBE3D-203ENST00000369747 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
UBE3D-203ENST00000369747 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
UBE3D-203ENST00000369747 Q1RN00 199 aa11.74□□□□□ -0.53
UBE3D-203ENST00000369747 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
UBE3D-203ENST00000369747 K7ERU9 68 aa11.74□□□□□ -0.53
UBE3D-203ENST00000369747 ANGP03950 147 aaKnown RBP11.74□□□□□ -0.53
UBE3D-203ENST00000369747 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
UBE3D-203ENST00000369747 REG3AQ06141 175 aa11.72□□□□□ -0.53
UBE3D-203ENST00000369747 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
UBE3D-203ENST00000369747 TRIAP1O43715 76 aa11.72□□□□□ -0.53
UBE3D-203ENST00000369747 SMCPP49901 116 aaPredicted RBP11.72□□□□□ -0.53
UBE3D-203ENST00000369747 LINC01561Q8N1V8 128 aa11.72□□□□□ -0.53
UBE3D-203ENST00000369747 PPDPFQ9H3Y8 114 aa11.72□□□□□ -0.53
UBE3D-203ENST00000369747 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
UBE3D-203ENST00000369747 RNF151Q2KHN1 245 aa11.7□□□□□ -0.54
UBE3D-203ENST00000369747 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
UBE3D-203ENST00000369747 CHCHD10Q8WYQ3 142 aaPredicted RBP11.7□□□□□ -0.54
UBE3D-203ENST00000369747 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
UBE3D-203ENST00000369747 ETDBQ3ZM63 59 aa11.7□□□□□ -0.54
UBE3D-203ENST00000369747 IGLV10-54A0A075B6I4 117 aa11.69□□□□□ -0.54
UBE3D-203ENST00000369747 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
UBE3D-203ENST00000369747 MIR7-3HGQ8N6C7 128 aa11.69□□□□□ -0.54
UBE3D-203ENST00000369747 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
UBE3D-203ENST00000369747 CCL18P55774 89 aa11.68□□□□□ -0.54
UBE3D-203ENST00000369747 C6orf226Q5I0X4 101 aa11.68□□□□□ -0.54
UBE3D-203ENST00000369747 Q8IZM0 81 aa11.68□□□□□ -0.54
UBE3D-203ENST00000369747 IBA57-AS1B1ANH7 110 aa11.68□□□□□ -0.54
UBE3D-203ENST00000369747 COX7A2LO14548 114 aa11.67□□□□□ -0.54
UBE3D-203ENST00000369747 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
UBE3D-203ENST00000369747 LINC00158P58513 81 aa11.66□□□□□ -0.54
UBE3D-203ENST00000369747 FOXI1Q12951 378 aa11.65□□□□□ -0.54
UBE3D-203ENST00000369747 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
UBE3D-203ENST00000369747 PRR34Q9NV39 138 aa11.65□□□□□ -0.54
UBE3D-203ENST00000369747 ATXN8Q156A1 80 aa11.64□□□□□ -0.55
UBE3D-203ENST00000369747 C2orf82Q6UX34 121 aa11.64□□□□□ -0.55
UBE3D-203ENST00000369747 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
UBE3D-203ENST00000369747 PFN2P35080 140 aa11.64□□□□□ -0.55
UBE3D-203ENST00000369747 COX6CP09669 75 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 ENHOQ6UWT2 76 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 C9JAW5 83 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 C3orf84H3BNL1 204 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 MALP21145 153 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 VPS25Q9BRG1 176 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
UBE3D-203ENST00000369747 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
UBE3D-203ENST00000369747 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
UBE3D-203ENST00000369747 UBE2DNLQ8IWF7 75 aa11.61□□□□□ -0.55
UBE3D-203ENST00000369747 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
UBE3D-203ENST00000369747 IGKV2-28A0A075B6P5 120 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 GAGE12HA6NDE8 117 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 SLC25A20O43772 301 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 IGKV2D-28P01615 120 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 CKS1BP61024 79 aa11.6□□□□□ -0.55
UBE3D-203ENST00000369747 CXCL5P42830 114 aa11.59□□□□□ -0.55
UBE3D-203ENST00000369747 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
UBE3D-203ENST00000369747 LINC00337Q8N6G1 96 aa11.58□□□□□ -0.55
UBE3D-203ENST00000369747 M0QXV9 152 aa11.58□□□□□ -0.56
UBE3D-203ENST00000369747 LST1O00453 97 aa11.58□□□□□ -0.56
UBE3D-203ENST00000369747 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
UBE3D-203ENST00000369747 LINC01556Q5JQF7 62 aa11.58□□□□□ -0.56
UBE3D-203ENST00000369747 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
UBE3D-203ENST00000369747 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
UBE3D-203ENST00000369747 KMT2AQ03164 3969 aa11.57□□□□□ -0.56
UBE3D-203ENST00000369747 CRPP02741 224 aa11.56□□□□□ -0.56
UBE3D-203ENST00000369747 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
UBE3D-203ENST00000369747 ANKRD29Q8N6D5 301 aa11.56□□□□□ -0.56
UBE3D-203ENST00000369747 J3QR89 54 aa11.55□□□□□ -0.56
UBE3D-203ENST00000369747 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
UBE3D-203ENST00000369747 LINC01600Q96MT4 127 aa11.55□□□□□ -0.56
UBE3D-203ENST00000369747 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
UBE3D-203ENST00000369747 TRBV10-2A0A0K0K1G8 114 aa11.54□□□□□ -0.56
UBE3D-203ENST00000369747 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
UBE3D-203ENST00000369747 COX17Q14061 63 aa11.54□□□□□ -0.56
UBE3D-203ENST00000369747 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms