RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 COX7CP15954 63 aa8.74□□□□□ -1.01
LINC01561-201ENST00000369071 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
LINC01561-201ENST00000369071 IGLV1-51P01701 117 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 NCR3O14931 201 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 SLPIP03973 132 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 Q6JHZ5 121 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 CENPEQ02224 2701 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 C2CD3Q4AC94 2353 aa8.73□□□□□ -1.01
LINC01561-201ENST00000369071 NOTCH3Q9UM47 2321 aa8.72□□□□□ -1.01
LINC01561-201ENST00000369071 SS18Q15532 418 aa8.72□□□□□ -1.01
LINC01561-201ENST00000369071 WNK1Q9H4A3 2382 aa8.72□□□□□ -1.01
LINC01561-201ENST00000369071 ATOX1O00244 68 aa8.72□□□□□ -1.01
LINC01561-201ENST00000369071 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
LINC01561-201ENST00000369071 ABCA12Q86UK0 2595 aa8.71□□□□□ -1.02
LINC01561-201ENST00000369071 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.02
LINC01561-201ENST00000369071 Q8IZM0 81 aa8.71□□□□□ -1.02
LINC01561-201ENST00000369071 LINC00167Q96N53 147 aa8.71□□□□□ -1.02
LINC01561-201ENST00000369071 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
LINC01561-201ENST00000369071 CRYGAP11844 174 aa8.7□□□□□ -1.02
LINC01561-201ENST00000369071 XCL1P47992 114 aa8.7□□□□□ -1.02
LINC01561-201ENST00000369071 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
LINC01561-201ENST00000369071 ORMDL1Q9P0S3 153 aa8.7□□□□□ -1.02
LINC01561-201ENST00000369071 A0A1B0GUV1 79 aa8.69□□□□□ -1.02
LINC01561-201ENST00000369071 NANOS2P60321 138 aaKnown RBP8.69□□□□□ -1.02
LINC01561-201ENST00000369071 LINC01006Q8NI28 216 aa8.69□□□□□ -1.02
LINC01561-201ENST00000369071 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
LINC01561-201ENST00000369071 LINC00612Q8N6U2 182 aa8.69□□□□□ -1.02
LINC01561-201ENST00000369071 CUBNO60494 3623 aa8.69□□□□□ -1.02
LINC01561-201ENST00000369071 NIPBLQ6KC79 2804 aaeCLIP8.68□□□□□ -1.02
LINC01561-201ENST00000369071 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
LINC01561-201ENST00000369071 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
LINC01561-201ENST00000369071 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
LINC01561-201ENST00000369071 CCKP06307 115 aa8.68□□□□□ -1.02
LINC01561-201ENST00000369071 GYPEP15421 78 aa8.68□□□□□ -1.02
LINC01561-201ENST00000369071 C16orf95Q9H693 158 aa8.68□□□□□ -1.02
LINC01561-201ENST00000369071 A0A1B0GX51 115 aa8.67□□□□□ -1.02
LINC01561-201ENST00000369071 PRR3P79522 188 aaKnown RBP8.66□□□□□ -1.02
LINC01561-201ENST00000369071 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
LINC01561-201ENST00000369071 NF1P21359 2839 aa8.66□□□□□ -1.02
LINC01561-201ENST00000369071 A0A087WVE0 104 aa8.66□□□□□ -1.02
LINC01561-201ENST00000369071 Q8N814 137 aa8.66□□□□□ -1.02
LINC01561-201ENST00000369071 JMJD1CQ15652 2540 aa8.66□□□□□ -1.02
LINC01561-201ENST00000369071 LRRK2Q5S007 2527 aa8.66□□□□□ -1.02
LINC01561-201ENST00000369071 NDUFC2O95298 119 aa8.65□□□□□ -1.02
LINC01561-201ENST00000369071 KIAA0087Q14695 138 aa8.65□□□□□ -1.02
LINC01561-201ENST00000369071 CLPSL2Q6UWE3 100 aa8.65□□□□□ -1.02
LINC01561-201ENST00000369071 TLN2Q9Y4G6 2542 aa8.65□□□□□ -1.02
LINC01561-201ENST00000369071 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
LINC01561-201ENST00000369071 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
LINC01561-201ENST00000369071 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
LINC01561-201ENST00000369071 RNASE1P07998 156 aaKnown RBP8.63□□□□□ -1.03
LINC01561-201ENST00000369071 COX17Q14061 63 aa8.63□□□□□ -1.03
LINC01561-201ENST00000369071 SERP2Q8N6R1 65 aa8.63□□□□□ -1.03
LINC01561-201ENST00000369071 UPK3BQ9BT76 320 aa8.63□□□□□ -1.03
LINC01561-201ENST00000369071 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 TMEM256-PLSCR3K7ERE1 68 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 ITPR3Q14573 2671 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 A0A096LPF7 62 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 X6R8D5 127 aa8.62□□□□□ -1.03
LINC01561-201ENST00000369071 SONP18583 2426 aaKnown RBP8.61□□□□□ -1.03
LINC01561-201ENST00000369071 APCP25054 2843 aa8.61□□□□□ -1.03
LINC01561-201ENST00000369071 IGHV4-28A0A0C4DH34 117 aa8.61□□□□□ -1.03
LINC01561-201ENST00000369071 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
LINC01561-201ENST00000369071 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
LINC01561-201ENST00000369071 Q8NDZ9 215 aa8.61□□□□□ -1.03
LINC01561-201ENST00000369071 KRTAP1-1Q07627 177 aa8.6□□□□□ -1.03
LINC01561-201ENST00000369071 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
LINC01561-201ENST00000369071 J3KT08 172 aa8.59□□□□□ -1.03
LINC01561-201ENST00000369071 C9orf116Q5BN46 136 aaPredicted RBP8.59□□□□□ -1.03
LINC01561-201ENST00000369071 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
LINC01561-201ENST00000369071 CHCHD10Q8WYQ3 142 aaPredicted RBP8.59□□□□□ -1.03
LINC01561-201ENST00000369071 ATP5EP2Q5VTU8 51 aa8.59□□□□□ -1.03
LINC01561-201ENST00000369071 ANK3Q12955 4377 aaKnown RBP8.58□□□□□ -1.04
LINC01561-201ENST00000369071 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
LINC01561-201ENST00000369071 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
LINC01561-201ENST00000369071 C6orf99Q4VX62 202 aa8.58□□□□□ -1.04
LINC01561-201ENST00000369071 Q8N3U1 123 aa8.58□□□□□ -1.04
LINC01561-201ENST00000369071 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
LINC01561-201ENST00000369071 HILS1P60008 231 aa8.57□□□□□ -1.04
LINC01561-201ENST00000369071 LINC00575Q6W349 94 aa8.57□□□□□ -1.04
LINC01561-201ENST00000369071 REG3AQ06141 175 aa8.56□□□□□ -1.04
LINC01561-201ENST00000369071 TMEM258P61165 79 aa8.56□□□□□ -1.04
LINC01561-201ENST00000369071 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
LINC01561-201ENST00000369071 ANGP03950 147 aaKnown RBP8.55□□□□□ -1.04
LINC01561-201ENST00000369071 LYRM9A8MSI8 78 aa8.55□□□□□ -1.04
LINC01561-201ENST00000369071 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
LINC01561-201ENST00000369071 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
LINC01561-201ENST00000369071 KRTAP21-3Q3LHN1 58 aa8.54□□□□□ -1.04
LINC01561-201ENST00000369071 SETD2Q9BYW2 2564 aaPredicted RBP8.54□□□□□ -1.04
LINC01561-201ENST00000369071 KRTAP10-3P60369 221 aa8.54□□□□□ -1.04
LINC01561-201ENST00000369071 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
LINC01561-201ENST00000369071 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
LINC01561-201ENST00000369071 FLNAP21333 2647 aaKnown RBP8.53□□□□□ -1.04
LINC01561-201ENST00000369071 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
LINC01561-201ENST00000369071 Q6ZQT0 140 aa8.53□□□□□ -1.04
LINC01561-201ENST00000369071 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms