RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 HNRNPA3P51991 378 aaKnown RBP5.94□□□□□ -1.46
SNX27-201ENST00000368838 SS18Q15532 418 aa5.94□□□□□ -1.46
SNX27-201ENST00000368838 ESRGQ1W209 222 aa5.94□□□□□ -1.46
SNX27-201ENST00000368838 C2orf91Q6ZV80 131 aa5.94□□□□□ -1.46
SNX27-201ENST00000368838 MYMXA0A1B0GTQ4 84 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 J3QQQ9 107 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 IGHV3-30-3P0DP02 117 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 MIAQ16674 131 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 C1orf134Q5TEV5 83 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 CD164L2Q6UWJ8 174 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 Q6ZVH6 145 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 PCP2Q8IVA1 136 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 SPANXB1Q9NS25 103 aaPredicted RBP5.93□□□□□ -1.46
SNX27-201ENST00000368838 CDKN2A-AS1Q9UH64 79 aa5.93□□□□□ -1.46
SNX27-201ENST00000368838 SMIM1B2RUZ4 78 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 TMEM262E9PQX1 116 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 TIMM17BO60830 172 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 CCL18P55774 89 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 COX6A2Q02221 97 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 REG3AQ06141 175 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 KRTAP4-12Q9BQ66 201 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 TM2D2Q9BX73 214 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 TP73-AS1Q9UF72 201 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
SNX27-201ENST00000368838 TRAV13-1A0A0B4J241 112 aa5.91□□□□□ -1.46
SNX27-201ENST00000368838 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
SNX27-201ENST00000368838 M0R143 59 aa5.91□□□□□ -1.46
SNX27-201ENST00000368838 HERV-K104P63124 156 aa5.91□□□□□ -1.46
SNX27-201ENST00000368838 HSD52Q0P140 79 aa5.91□□□□□ -1.46
SNX27-201ENST00000368838 C10orf126Q8N4M7 172 aa5.91□□□□□ -1.46
SNX27-201ENST00000368838 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.46
SNX27-201ENST00000368838 NDUFA1O15239 70 aa5.9□□□□□ -1.47
SNX27-201ENST00000368838 LGALS3P17931 250 aaKnown RBP5.9□□□□□ -1.47
SNX27-201ENST00000368838 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.47
SNX27-201ENST00000368838 MAPKAPK5-AS1Q8N8E1 139 aa5.9□□□□□ -1.47
SNX27-201ENST00000368838 NBDYA0A0U1RRE5 68 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 ZNF815PA8K554 130 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 C16orf90A8MZG2 172 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 ANGP03950 147 aaKnown RBP5.89□□□□□ -1.47
SNX27-201ENST00000368838 CXCL5P42830 114 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 ENHOQ6UWT2 76 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 Q8IZM0 81 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 LINC00269Q8N2A0 174 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 DNAH5Q8TE73 4624 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 LINC00588Q9Y4M8 146 aa5.89□□□□□ -1.47
SNX27-201ENST00000368838 IBA57-AS1B1ANH7 110 aa5.88□□□□□ -1.47
SNX27-201ENST00000368838 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
SNX27-201ENST00000368838 KRTAP26-1Q6PEX3 210 aa5.88□□□□□ -1.47
SNX27-201ENST00000368838 WFDC10BQ8IUB3 73 aa5.88□□□□□ -1.47
SNX27-201ENST00000368838 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
SNX27-201ENST00000368838 SNHG12Q9BXW3 62 aa5.88□□□□□ -1.47
SNX27-201ENST00000368838 NDUFA12Q9UI09 145 aa5.88□□□□□ -1.47
SNX27-201ENST00000368838 IGHV3-64A0A075B6Q5 118 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 TRAV8-3A0A0A6YYJ7 113 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 COX7A2LO14548 114 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 APOMO95445 188 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 FOXI1Q12951 378 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 BVES-AS1Q5T3Y7 98 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 C6orf223Q8N319 242 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
SNX27-201ENST00000368838 COX11Q9Y6N1 276 aa5.87□□□□□ -1.47
SNX27-201ENST00000368838 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 CRPP02741 224 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 SPINK8P0C7L1 97 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 IFITM1P13164 125 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 LITAFQ99732 161 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 SPANXDQ9BXN6 97 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 SPANXCQ9NY87 97 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
SNX27-201ENST00000368838 A0A1B0GWB2 263 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
SNX27-201ENST00000368838 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
SNX27-201ENST00000368838 COX17Q14061 63 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 KIAA0087Q14695 138 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 SCGB1D4Q6XE38 83 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 COX7B2Q8TF08 81 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 ORAOV1Q8WV07 137 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 COPS9Q8WXC6 57 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 RMI2Q96E14 147 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
SNX27-201ENST00000368838 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.47
SNX27-201ENST00000368838 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 LOC107984156A0A0G2JMH3 177 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 ARL17AQ8IVW1 177 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 CEND1Q8N111 149 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 Q9H8V8 135 aa5.84□□□□□ -1.47
SNX27-201ENST00000368838 PRYO14603 147 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 IGHV3-30P01768 117 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 PRSS2P07478 247 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 IGHV3-30-5P0DP03 117 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 XCL1P47992 114 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 UBE2WQ96B02 151 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 C2orf48Q96LS8 159 aa5.83□□□□□ -1.48
SNX27-201ENST00000368838 GAGE12HA6NDE8 117 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms