RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CIRBPQ14011 172 aaKnown RBP5.1□□□□□ -1.59
CLCN3-202ENST00000360642 TMEM243Q9BU79 118 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 TRGV2A0A075B6R0 118 aa5.09□□□□□ -1.59
CLCN3-202ENST00000360642 LINC00308Q8TCZ7 52 aa5.09□□□□□ -1.59
CLCN3-202ENST00000360642 Q6ZRP5 223 aa5.09□□□□□ -1.59
CLCN3-202ENST00000360642 TRBV10-2A0A0K0K1G8 114 aa5.08□□□□□ -1.6
CLCN3-202ENST00000360642 KRTAP10-3P60369 221 aa5.08□□□□□ -1.6
CLCN3-202ENST00000360642 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
CLCN3-202ENST00000360642 UBE2L6O14933 153 aa5.08□□□□□ -1.6
CLCN3-202ENST00000360642 RPL13AP40429 203 aaKnown RBP5.08□□□□□ -1.6
CLCN3-202ENST00000360642 SOSTDC1Q6X4U4 206 aa5.08□□□□□ -1.6
CLCN3-202ENST00000360642 TRGV4A0A0C4DH28 118 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 COX6CP09669 75 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 UNC79Q9P2D8 2635 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 TRBV6-8A0A0A6YYG3 113 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 J3QKU1 62 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 LST1O00453 97 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 HIVEP2P31629 2446 aa5.07□□□□□ -1.6
CLCN3-202ENST00000360642 OTOGQ6ZRI0 2925 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 PRIMA1Q86XR5 153 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 KIR2DL5BQ8NHK3 375 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 IGLV4-60A0A075B6I1 120 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 TMEM262E9PQX1 116 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 MT-ATP8P03928 68 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 CLEC2BQ92478 149 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 TRRAPQ9Y4A5 3859 aa5.06□□□□□ -1.6
CLCN3-202ENST00000360642 TRAV26-1A0A087WT03 109 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 IGKV3OR2-268A0A0C4DH90 116 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 H3BT86 120 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 GAGE6Q13070 117 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 IGHV3OR16-9A0A0B4J2B5 98 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 TEX49A0A1B0GTD5 131 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 SPATA3Q8NHX4 192 aa5.05□□□□□ -1.6
CLCN3-202ENST00000360642 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
CLCN3-202ENST00000360642 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
CLCN3-202ENST00000360642 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
CLCN3-202ENST00000360642 TENM1Q9UKZ4 2725 aa5.04□□□□□ -1.6
CLCN3-202ENST00000360642 CRLF1O75462 422 aa5.04□□□□□ -1.6
CLCN3-202ENST00000360642 COX7A2LO14548 114 aa5.03□□□□□ -1.6
CLCN3-202ENST00000360642 NANOS2P60321 138 aaKnown RBP5.03□□□□□ -1.6
CLCN3-202ENST00000360642 DEFB121Q5J5C9 76 aa5.03□□□□□ -1.6
CLCN3-202ENST00000360642 UBE2WQ96B02 151 aa5.03□□□□□ -1.6
CLCN3-202ENST00000360642 DEFB130BP0DP73 79 aa5.03□□□□□ -1.6
CLCN3-202ENST00000360642 DEFB130AP0DP74 79 aa5.03□□□□□ -1.6
CLCN3-202ENST00000360642 CHCHD5Q9BSY4 110 aa5.03□□□□□ -1.6
CLCN3-202ENST00000360642 SMIM9A6NGZ8 99 aa5.02□□□□□ -1.61
CLCN3-202ENST00000360642 LY6G6DO95868 133 aa5.02□□□□□ -1.61
CLCN3-202ENST00000360642 LINC00959A0A1B0GUT2 108 aa5.02□□□□□ -1.61
CLCN3-202ENST00000360642 A0A1B0GUV1 79 aa5.02□□□□□ -1.61
CLCN3-202ENST00000360642 MIR7-3HGQ8N6C7 128 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 IGKV2-28A0A075B6P5 120 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 IGKV2D-28P01615 120 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 FAM222AQ5U5X8 452 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 TRAV8-4A0A0B4J246 113 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 IBA57-AS1B1ANH7 110 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 PRO0255Q9UI72 69 aa5.01□□□□□ -1.61
CLCN3-202ENST00000360642 A0A096LPF7 62 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 A0A1B0GV72 72 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 DEFB4AO15263 64 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 TRACP01848 142 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 RPL28P46779 137 aaKnown RBP5□□□□□ -1.61
CLCN3-202ENST00000360642 LINC00337Q8N6G1 96 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 TOMM7Q9P0U1 55 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 CKS1BP61024 79 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 C9orf66Q5T8R8 295 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 C5orf38Q86SI9 138 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
CLCN3-202ENST00000360642 FAM240AA0A1B0GVK7 77 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 LYRM9A8MSI8 78 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 SND1-IT1Q9HBX3 110 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 ATRQ13535 2644 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 CCL18P55774 89 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 LINC00158P58513 81 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 C22orf24Q9Y442 160 aa4.99□□□□□ -1.61
CLCN3-202ENST00000360642 CRPP02741 224 aa4.98□□□□□ -1.61
CLCN3-202ENST00000360642 SS18Q15532 418 aa4.98□□□□□ -1.61
CLCN3-202ENST00000360642 CLPSL2Q6UWE3 100 aa4.98□□□□□ -1.61
CLCN3-202ENST00000360642 C11orf68Q9H3H3 251 aaKnown RBP4.98□□□□□ -1.61
CLCN3-202ENST00000360642 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 Q8IZM0 81 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 SNCGO76070 127 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 XCL1P47992 114 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 DEFB135Q30KP9 77 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 Q6Q795 121 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 SMIM11BQ8TCY0 68 aa4.97□□□□□ -1.61
CLCN3-202ENST00000360642 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.62
CLCN3-202ENST00000360642 PFN2P35080 140 aa4.96□□□□□ -1.62
CLCN3-202ENST00000360642 C15orf53Q8NAA6 179 aa4.96□□□□□ -1.62
CLCN3-202ENST00000360642 APOC4P55056 127 aa4.96□□□□□ -1.62
CLCN3-202ENST00000360642 NDUFV3P56181 108 aaKnown RBP4.95□□□□□ -1.62
CLCN3-202ENST00000360642 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
CLCN3-202ENST00000360642 Q8NAQ8 132 aa4.95□□□□□ -1.62
CLCN3-202ENST00000360642 Q9HAA7 133 aa4.95□□□□□ -1.62
CLCN3-202ENST00000360642 TEP1Q99973 2627 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms