RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
COL20A1-201ENST00000358894 KLK12Q9UKR0 248 aa8.8□□□□□ -1
COL20A1-201ENST00000358894 SPART-AS1P0CW21 52 aa8.8□□□□□ -1
COL20A1-201ENST00000358894 SNURFQ9Y675 71 aa8.8□□□□□ -1
COL20A1-201ENST00000358894 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
COL20A1-201ENST00000358894 C4orf26Q17RF5 130 aa8.8□□□□□ -1
COL20A1-201ENST00000358894 CXCL5P42830 114 aa8.79□□□□□ -1
COL20A1-201ENST00000358894 INAFM1C9JVW0 142 aa8.79□□□□□ -1
COL20A1-201ENST00000358894 UPK3BQ9BT76 320 aa8.79□□□□□ -1
COL20A1-201ENST00000358894 SMIM1B2RUZ4 78 aa8.78□□□□□ -1
COL20A1-201ENST00000358894 DEFB121Q5J5C9 76 aa8.78□□□□□ -1
COL20A1-201ENST00000358894 C11orf72Q8NBR9 251 aa8.78□□□□□ -1
COL20A1-201ENST00000358894 IGSF10Q6WRI0 2623 aa8.78□□□□□ -1
COL20A1-201ENST00000358894 TRBV7-7A0A0K0K1E9 115 aa8.77□□□□□ -1
COL20A1-201ENST00000358894 TIMM17BO60830 172 aa8.77□□□□□ -1
COL20A1-201ENST00000358894 BEAN1Q3B7T3 259 aa8.77□□□□□ -1
COL20A1-201ENST00000358894 NDUFC2-KCTD14E9PQ53 114 aa8.76□□□□□ -1.01
COL20A1-201ENST00000358894 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
COL20A1-201ENST00000358894 KIR2DL5BQ8NHK3 375 aa8.76□□□□□ -1.01
COL20A1-201ENST00000358894 DEFB105AQ8NG35 78 aa8.76□□□□□ -1.01
COL20A1-201ENST00000358894 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
COL20A1-201ENST00000358894 JMJD7-PLA2G4BH0Y9G9 81 aa8.75□□□□□ -1.01
COL20A1-201ENST00000358894 HILS1P60008 231 aa8.75□□□□□ -1.01
COL20A1-201ENST00000358894 IGLV1-51P01701 117 aa8.75□□□□□ -1.01
COL20A1-201ENST00000358894 REG3AQ06141 175 aa8.74□□□□□ -1.01
COL20A1-201ENST00000358894 F8P00451 2351 aa8.74□□□□□ -1.01
COL20A1-201ENST00000358894 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
COL20A1-201ENST00000358894 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
COL20A1-201ENST00000358894 IGKV2D-24A0A075B6R9 120 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 RELNP78509 3460 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 SMIM26A0A096LP01 95 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 CHD6Q8TD26 2715 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 LINC00959A0A1B0GUT2 108 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 IBA57-AS1B1ANH7 110 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 USP24Q9UPU5 2620 aa8.73□□□□□ -1.01
COL20A1-201ENST00000358894 LY6G6DO95868 133 aa8.72□□□□□ -1.01
COL20A1-201ENST00000358894 Q8N2B8 174 aa8.72□□□□□ -1.01
COL20A1-201ENST00000358894 CAMK2N2Q96S95 79 aa8.72□□□□□ -1.01
COL20A1-201ENST00000358894 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
COL20A1-201ENST00000358894 NTM-AS1Q6ZSK4 140 aa8.72□□□□□ -1.01
COL20A1-201ENST00000358894 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
COL20A1-201ENST00000358894 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
COL20A1-201ENST00000358894 ATRQ13535 2644 aa8.71□□□□□ -1.02
COL20A1-201ENST00000358894 TEX15Q9BXT5 2789 aa8.71□□□□□ -1.02
COL20A1-201ENST00000358894 ITPR1Q14643 2758 aa8.71□□□□□ -1.02
COL20A1-201ENST00000358894 CRYGAP11844 174 aa8.7□□□□□ -1.02
COL20A1-201ENST00000358894 CCL18P55774 89 aa8.7□□□□□ -1.02
COL20A1-201ENST00000358894 SEC61GP60059 68 aa8.7□□□□□ -1.02
COL20A1-201ENST00000358894 LYRM9A8MSI8 78 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 FHL2Q14192 279 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 SMIM11BQ8TCY0 68 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
COL20A1-201ENST00000358894 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 HIGD2BQ4VC39 106 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 Q6JHZ5 121 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 FSHBP01225 129 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
COL20A1-201ENST00000358894 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
COL20A1-201ENST00000358894 NREPQ16612 68 aa8.68□□□□□ -1.02
COL20A1-201ENST00000358894 SOSTDC1Q6X4U4 206 aa8.68□□□□□ -1.02
COL20A1-201ENST00000358894 HELZ2Q9BYK8 2649 aaKnown RBP8.68□□□□□ -1.02
COL20A1-201ENST00000358894 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
COL20A1-201ENST00000358894 F8WEM9 126 aa8.67□□□□□ -1.02
COL20A1-201ENST00000358894 A0A096LNT2 108 aa8.67□□□□□ -1.02
COL20A1-201ENST00000358894 PSCAO43653 123 aa8.66□□□□□ -1.02
COL20A1-201ENST00000358894 ATP5EP2Q5VTU8 51 aa8.66□□□□□ -1.02
COL20A1-201ENST00000358894 LRCOL1A6NCL2 159 aa8.66□□□□□ -1.02
COL20A1-201ENST00000358894 PRR4Q16378 134 aa8.66□□□□□ -1.02
COL20A1-201ENST00000358894 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
COL20A1-201ENST00000358894 C6orf99Q4VX62 202 aa8.65□□□□□ -1.02
COL20A1-201ENST00000358894 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.02
COL20A1-201ENST00000358894 ZANQ9Y493 2812 aa8.65□□□□□ -1.02
COL20A1-201ENST00000358894 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
COL20A1-201ENST00000358894 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
COL20A1-201ENST00000358894 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
COL20A1-201ENST00000358894 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
COL20A1-201ENST00000358894 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.03
COL20A1-201ENST00000358894 LINC00846Q9NV44 126 aa8.65□□□□□ -1.03
COL20A1-201ENST00000358894 HRNRQ86YZ3 2850 aaPredicted RBP8.64□□□□□ -1.03
COL20A1-201ENST00000358894 A0A087WZ39 114 aa8.64□□□□□ -1.03
COL20A1-201ENST00000358894 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
COL20A1-201ENST00000358894 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL20A1-201ENST00000358894 A0A087WYN8 130 aa8.63□□□□□ -1.03
COL20A1-201ENST00000358894 MIFP14174 115 aa8.62□□□□□ -1.03
COL20A1-201ENST00000358894 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
COL20A1-201ENST00000358894 C16orf95Q9H693 158 aa8.62□□□□□ -1.03
COL20A1-201ENST00000358894 GCN1Q92616 2671 aaKnown RBP8.62□□□□□ -1.03
COL20A1-201ENST00000358894 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
COL20A1-201ENST00000358894 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
COL20A1-201ENST00000358894 LITAFQ99732 161 aa8.61□□□□□ -1.03
COL20A1-201ENST00000358894 RETNQ9HD89 108 aa8.61□□□□□ -1.03
COL20A1-201ENST00000358894 Q8IZM0 81 aa8.61□□□□□ -1.03
COL20A1-201ENST00000358894 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
COL20A1-201ENST00000358894 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
COL20A1-201ENST00000358894 NDUFC1O43677 76 aa8.6□□□□□ -1.03
COL20A1-201ENST00000358894 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
COL20A1-201ENST00000358894 IGHV3OR16-9A0A0B4J2B5 98 aa8.59□□□□□ -1.03
COL20A1-201ENST00000358894 IGHV4-30-4P0DP06 118 aa8.59□□□□□ -1.03
COL20A1-201ENST00000358894 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
COL20A1-201ENST00000358894 TRAV7A0A075B6U4 112 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms