RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 H3BT86 120 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 FAM218AQ96MZ4 157 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 TMEM86BQ8N661 226 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 INAFM1C9JVW0 142 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 TIRAPP58753 221 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 COPS9Q8WXC6 57 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 COX7A2LO14548 114 aa8.87□□□□□ -0.99
LMX1A-202ENST00000342310 TRBV10-1A0A0K0K1A3 114 aa8.86□□□□□ -0.99
LMX1A-202ENST00000342310 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
LMX1A-202ENST00000342310 PKD1L1Q8TDX9 2849 aa8.86□□□□□ -0.99
LMX1A-202ENST00000342310 RNF152Q8N8N0 203 aa8.86□□□□□ -0.99
LMX1A-202ENST00000342310 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
LMX1A-202ENST00000342310 CCL18P55774 89 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 A0A087WYN8 130 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 hADV29S1A0JD25 119 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 BEAN1Q3B7T3 259 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 A0A1B0GX51 115 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 M0QXV9 152 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
LMX1A-202ENST00000342310 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
LMX1A-202ENST00000342310 TRAV13-2A0A0B4J235 113 aa8.84□□□□□ -0.99
LMX1A-202ENST00000342310 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
LMX1A-202ENST00000342310 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
LMX1A-202ENST00000342310 FHL2Q14192 279 aa8.82□□□□□ -1
LMX1A-202ENST00000342310 GIG44P09565 113 aaPredicted RBP8.82□□□□□ -1
LMX1A-202ENST00000342310 TRAV25A0A0B4J276 109 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 HIGD2BQ4VC39 106 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 J3QKU1 62 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 FSHBP01225 129 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 HAMPP81172 84 aa8.81□□□□□ -1
LMX1A-202ENST00000342310 AKAP9Q99996 3911 aa8.8□□□□□ -1
LMX1A-202ENST00000342310 C6orf223Q8N319 242 aa8.8□□□□□ -1
LMX1A-202ENST00000342310 IGLV1-51P01701 117 aa8.8□□□□□ -1
LMX1A-202ENST00000342310 RPL18AQ02543 176 aaKnown RBP8.79□□□□□ -1
LMX1A-202ENST00000342310 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
LMX1A-202ENST00000342310 TRRAPQ9Y4A5 3859 aa8.79□□□□□ -1
LMX1A-202ENST00000342310 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
LMX1A-202ENST00000342310 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
LMX1A-202ENST00000342310 PRO0255Q9UI72 69 aa8.79□□□□□ -1
LMX1A-202ENST00000342310 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
LMX1A-202ENST00000342310 IGLV5-39A0A0G2JS06 123 aa8.78□□□□□ -1
LMX1A-202ENST00000342310 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
LMX1A-202ENST00000342310 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
LMX1A-202ENST00000342310 TMEM126AQ9H061 195 aa8.77□□□□□ -1
LMX1A-202ENST00000342310 REG3AQ06141 175 aa8.77□□□□□ -1.01
LMX1A-202ENST00000342310 LINC00643Q86TS7 51 aa8.77□□□□□ -1.01
LMX1A-202ENST00000342310 RETNQ9HD89 108 aa8.77□□□□□ -1.01
LMX1A-202ENST00000342310 LY6G6DO95868 133 aa8.76□□□□□ -1.01
LMX1A-202ENST00000342310 C6orf99Q4VX62 202 aa8.76□□□□□ -1.01
LMX1A-202ENST00000342310 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
LMX1A-202ENST00000342310 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
LMX1A-202ENST00000342310 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
LMX1A-202ENST00000342310 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
LMX1A-202ENST00000342310 IGHV3OR16-9A0A0B4J2B5 98 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 IGHV4-28A0A0C4DH34 117 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 IGKV2-28A0A075B6P5 120 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 IGKV2D-28P01615 120 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 CXCL5P42830 114 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 CMC4P56277 68 aaPredicted RBP8.75□□□□□ -1.01
LMX1A-202ENST00000342310 MRAPQ8TCY5 172 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 DSCR8Q96T75 97 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 LRRC75A-AS1Q8N1F1 130 aa8.75□□□□□ -1.01
LMX1A-202ENST00000342310 TIMM17BO60830 172 aa8.74□□□□□ -1.01
LMX1A-202ENST00000342310 HILS1P60008 231 aa8.74□□□□□ -1.01
LMX1A-202ENST00000342310 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
LMX1A-202ENST00000342310 CELA1Q9UNI1 258 aa8.74□□□□□ -1.01
LMX1A-202ENST00000342310 TRACP01848 142 aa8.73□□□□□ -1.01
LMX1A-202ENST00000342310 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
LMX1A-202ENST00000342310 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
LMX1A-202ENST00000342310 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
LMX1A-202ENST00000342310 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
LMX1A-202ENST00000342310 LINC00846Q9NV44 126 aa8.72□□□□□ -1.01
LMX1A-202ENST00000342310 IGLV5-45A0A087WSX0 123 aa8.72□□□□□ -1.01
LMX1A-202ENST00000342310 ENHOQ6UWT2 76 aa8.72□□□□□ -1.01
LMX1A-202ENST00000342310 A0A087WZ39 114 aa8.71□□□□□ -1.02
LMX1A-202ENST00000342310 ZNF561-AS1K7EIQ3 104 aa8.71□□□□□ -1.02
LMX1A-202ENST00000342310 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
LMX1A-202ENST00000342310 C20orf197Q8N268 126 aa8.71□□□□□ -1.02
LMX1A-202ENST00000342310 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
LMX1A-202ENST00000342310 ACYP1P07311 99 aa8.7□□□□□ -1.02
LMX1A-202ENST00000342310 KRTAP10-3P60369 221 aa8.7□□□□□ -1.02
LMX1A-202ENST00000342310 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
LMX1A-202ENST00000342310 IGKV2D-24A0A075B6R9 120 aa8.7□□□□□ -1.02
LMX1A-202ENST00000342310 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
LMX1A-202ENST00000342310 KMT2BQ9UMN6 2715 aaPredicted RBP8.69□□□□□ -1.02
LMX1A-202ENST00000342310 C19orf73Q9NVV2 129 aa8.69□□□□□ -1.02
LMX1A-202ENST00000342310 DEFB121Q5J5C9 76 aa8.69□□□□□ -1.02
LMX1A-202ENST00000342310 UQCRQO14949 82 aa8.68□□□□□ -1.02
LMX1A-202ENST00000342310 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
LMX1A-202ENST00000342310 H0YGX0 51 aa8.68□□□□□ -1.02
LMX1A-202ENST00000342310 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
LMX1A-202ENST00000342310 GHRHP01286 108 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms