RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 REG3AQ06141 175 aa11.11□□□□□ -0.63
SCNN1A-202ENST00000338748 LELP1Q5T871 98 aa11.11□□□□□ -0.63
SCNN1A-202ENST00000338748 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
SCNN1A-202ENST00000338748 CHCHD10Q8WYQ3 142 aaPredicted RBP11.09□□□□□ -0.63
SCNN1A-202ENST00000338748 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
SCNN1A-202ENST00000338748 LYRM7Q5U5X0 104 aa11.08□□□□□ -0.64
SCNN1A-202ENST00000338748 LYPD5Q6UWN5 251 aa11.08□□□□□ -0.64
SCNN1A-202ENST00000338748 MIR7-3HGQ8N6C7 128 aa11.08□□□□□ -0.64
SCNN1A-202ENST00000338748 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
SCNN1A-202ENST00000338748 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
SCNN1A-202ENST00000338748 TRBV20-1A0A075B6N2 111 aa11.07□□□□□ -0.64
SCNN1A-202ENST00000338748 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
SCNN1A-202ENST00000338748 CD164L2Q6UWJ8 174 aa11.07□□□□□ -0.64
SCNN1A-202ENST00000338748 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
SCNN1A-202ENST00000338748 C6orf226Q5I0X4 101 aa11.05□□□□□ -0.64
SCNN1A-202ENST00000338748 PFN2P35080 140 aa11.05□□□□□ -0.64
SCNN1A-202ENST00000338748 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
SCNN1A-202ENST00000338748 LINC00158P58513 81 aa11.04□□□□□ -0.64
SCNN1A-202ENST00000338748 Q8IZM0 81 aa11.04□□□□□ -0.64
SCNN1A-202ENST00000338748 COX7A2LO14548 114 aa11.04□□□□□ -0.64
SCNN1A-202ENST00000338748 FOXI1Q12951 378 aa11.04□□□□□ -0.64
SCNN1A-202ENST00000338748 WFDC10BQ8IUB3 73 aa11.04□□□□□ -0.64
SCNN1A-202ENST00000338748 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
SCNN1A-202ENST00000338748 IBA57-AS1B1ANH7 110 aa11.03□□□□□ -0.64
SCNN1A-202ENST00000338748 ENHOQ6UWT2 76 aa11.03□□□□□ -0.64
SCNN1A-202ENST00000338748 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
SCNN1A-202ENST00000338748 CLEC2BQ92478 149 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 IGKV2-28A0A075B6P5 120 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 H3BNG1 76 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 K7EIL1 84 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 IGKV2D-28P01615 120 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 CCL18P55774 89 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 LINC01561Q8N1V8 128 aa11.01□□□□□ -0.65
SCNN1A-202ENST00000338748 COL7A1Q02388 2944 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 J3QR89 54 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 COPS9Q8WXC6 57 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 DNAH9Q9NYC9 4486 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 C9JAW5 83 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 LINC00337Q8N6G1 96 aa11□□□□□ -0.65
SCNN1A-202ENST00000338748 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 MALP21145 153 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 MRAPQ8TCY5 172 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 LYSTQ99698 3801 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 SND1-IT1Q9HBX3 110 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 ESRGQ1W209 222 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 LINC00526Q96FQ7 95 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
SCNN1A-202ENST00000338748 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
SCNN1A-202ENST00000338748 SLC25A20O43772 301 aa10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 CKS1BP61024 79 aa10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 LINC01620Q4KN68 170 aa10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 C9orf116Q5BN46 136 aaPredicted RBP10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 UBE2WQ96B02 151 aa10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 DNAH1Q9P2D7 4330 aa10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 C6orf223Q8N319 242 aa10.97□□□□□ -0.65
SCNN1A-202ENST00000338748 STAB2Q8WWQ8 2551 aa10.96□□□□□ -0.66
SCNN1A-202ENST00000338748 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.66
SCNN1A-202ENST00000338748 COX6CP09669 75 aa10.95□□□□□ -0.66
SCNN1A-202ENST00000338748 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
SCNN1A-202ENST00000338748 ANKRD29Q8N6D5 301 aa10.95□□□□□ -0.66
SCNN1A-202ENST00000338748 LST1O00453 97 aa10.94□□□□□ -0.66
SCNN1A-202ENST00000338748 DEFB121Q5J5C9 76 aa10.94□□□□□ -0.66
SCNN1A-202ENST00000338748 CARD19Q96LW7 228 aa10.94□□□□□ -0.66
SCNN1A-202ENST00000338748 MDFIQ99750 246 aa10.94□□□□□ -0.66
SCNN1A-202ENST00000338748 TEN1Q86WV5 123 aa10.94□□□□□ -0.66
SCNN1A-202ENST00000338748 SPATA25Q9BR10 227 aa10.94□□□□□ -0.66
SCNN1A-202ENST00000338748 CRPP02741 224 aa10.93□□□□□ -0.66
SCNN1A-202ENST00000338748 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
SCNN1A-202ENST00000338748 SIGMAR1Q99720 223 aa10.93□□□□□ -0.66
SCNN1A-202ENST00000338748 UNQ6190/PRO20217Q6UXQ8 127 aa10.92□□□□□ -0.66
SCNN1A-202ENST00000338748 CXCL5P42830 114 aa10.92□□□□□ -0.66
SCNN1A-202ENST00000338748 KLK5Q9Y337 293 aaPredicted RBP10.92□□□□□ -0.66
SCNN1A-202ENST00000338748 TRAV13-2A0A0B4J235 113 aa10.91□□□□□ -0.66
SCNN1A-202ENST00000338748 KRTAP26-1Q6PEX3 210 aa10.9□□□□□ -0.66
SCNN1A-202ENST00000338748 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
SCNN1A-202ENST00000338748 TRBV10-2A0A0K0K1G8 114 aa10.9□□□□□ -0.66
SCNN1A-202ENST00000338748 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
SCNN1A-202ENST00000338748 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
SCNN1A-202ENST00000338748 Q8NDZ9 215 aa10.89□□□□□ -0.67
SCNN1A-202ENST00000338748 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
SCNN1A-202ENST00000338748 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
SCNN1A-202ENST00000338748 M0QXV9 152 aa10.87□□□□□ -0.67
SCNN1A-202ENST00000338748 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
SCNN1A-202ENST00000338748 COX17Q14061 63 aa10.87□□□□□ -0.67
SCNN1A-202ENST00000338748 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
SCNN1A-202ENST00000338748 LINC01556Q5JQF7 62 aa10.86□□□□□ -0.67
SCNN1A-202ENST00000338748 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
SCNN1A-202ENST00000338748 TRAV10A0A0B4J240 114 aa10.85□□□□□ -0.67
SCNN1A-202ENST00000338748 HIGD2BQ4VC39 106 aa10.85□□□□□ -0.67
SCNN1A-202ENST00000338748 LINC01600Q96MT4 127 aa10.85□□□□□ -0.67
SCNN1A-202ENST00000338748 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
SCNN1A-202ENST00000338748 DNHD1Q96M86 4753 aa10.84□□□□□ -0.67
SCNN1A-202ENST00000338748 CSMD3Q7Z407 3707 aa10.84□□□□□ -0.67
SCNN1A-202ENST00000338748 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
SCNN1A-202ENST00000338748 DNAH10Q8IVF4 4471 aa10.84□□□□□ -0.67
SCNN1A-202ENST00000338748 C6orf48Q9UBA6 75 aa10.84□□□□□ -0.67
SCNN1A-202ENST00000338748 C15orf56Q8N910 161 aa10.83□□□□□ -0.68
SCNN1A-202ENST00000338748 PRKDCP78527 4128 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms