RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 K7EIL1 84 aa12.5□□□□□ -0.41
CCDC43-201ENST00000315286 COX7A2LO14548 114 aa12.5□□□□□ -0.41
CCDC43-201ENST00000315286 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
CCDC43-201ENST00000315286 MGAM2Q2M2H8 2515 aa12.5□□□□□ -0.41
CCDC43-201ENST00000315286 TRBV20-1A0A075B6N2 111 aa12.5□□□□□ -0.41
CCDC43-201ENST00000315286 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
CCDC43-201ENST00000315286 Q8IZM0 81 aa12.49□□□□□ -0.41
CCDC43-201ENST00000315286 DEFB131BA0A096LNP1 70 aa12.49□□□□□ -0.41
CCDC43-201ENST00000315286 LINC00158P58513 81 aa12.49□□□□□ -0.41
CCDC43-201ENST00000315286 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
CCDC43-201ENST00000315286 TRBV30A0A0K0K1B3 111 aa12.48□□□□□ -0.41
CCDC43-201ENST00000315286 IBA57-AS1B1ANH7 110 aa12.48□□□□□ -0.41
CCDC43-201ENST00000315286 TRIAP1O43715 76 aa12.48□□□□□ -0.41
CCDC43-201ENST00000315286 RPL13AP40429 203 aaKnown RBP12.48□□□□□ -0.41
CCDC43-201ENST00000315286 FOXI1Q12951 378 aa12.48□□□□□ -0.41
CCDC43-201ENST00000315286 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 C2orf82Q6UX34 121 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 MRAPQ8TCY5 172 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 PFN2P35080 140 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 ENHOQ6UWT2 76 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 WFDC10BQ8IUB3 73 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 SPATA25Q9BR10 227 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
CCDC43-201ENST00000315286 MALP21145 153 aa12.46□□□□□ -0.41
CCDC43-201ENST00000315286 KIAA0087Q14695 138 aa12.46□□□□□ -0.41
CCDC43-201ENST00000315286 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.41
CCDC43-201ENST00000315286 ESRGQ1W209 222 aa12.46□□□□□ -0.42
CCDC43-201ENST00000315286 TM2D3Q9BRN9 247 aa12.46□□□□□ -0.42
CCDC43-201ENST00000315286 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
CCDC43-201ENST00000315286 SMCPP49901 116 aaPredicted RBP12.45□□□□□ -0.42
CCDC43-201ENST00000315286 MDFIQ99750 246 aa12.44□□□□□ -0.42
CCDC43-201ENST00000315286 K7ERU9 68 aa12.44□□□□□ -0.42
CCDC43-201ENST00000315286 ETDBQ3ZM63 59 aa12.44□□□□□ -0.42
CCDC43-201ENST00000315286 CKS1BP61024 79 aa12.43□□□□□ -0.42
CCDC43-201ENST00000315286 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
CCDC43-201ENST00000315286 CCL18P55774 89 aa12.42□□□□□ -0.42
CCDC43-201ENST00000315286 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
CCDC43-201ENST00000315286 CFAP161Q6P656 301 aa12.41□□□□□ -0.42
CCDC43-201ENST00000315286 SND1-IT1Q9HBX3 110 aa12.41□□□□□ -0.42
CCDC43-201ENST00000315286 CRPP02741 224 aa12.4□□□□□ -0.42
CCDC43-201ENST00000315286 COX6CP09669 75 aa12.39□□□□□ -0.43
CCDC43-201ENST00000315286 ATXN8Q156A1 80 aa12.39□□□□□ -0.43
CCDC43-201ENST00000315286 KLK5Q9Y337 293 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-201ENST00000315286 CXCL5P42830 114 aa12.39□□□□□ -0.43
CCDC43-201ENST00000315286 IGKV2-28A0A075B6P5 120 aa12.38□□□□□ -0.43
CCDC43-201ENST00000315286 IGKV2D-28P01615 120 aa12.38□□□□□ -0.43
CCDC43-201ENST00000315286 TRAV8-4A0A0B4J246 113 aa12.38□□□□□ -0.43
CCDC43-201ENST00000315286 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
CCDC43-201ENST00000315286 C9JAW5 83 aa12.37□□□□□ -0.43
CCDC43-201ENST00000315286 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
CCDC43-201ENST00000315286 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
CCDC43-201ENST00000315286 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
CCDC43-201ENST00000315286 SPAG11BQ08648 103 aa12.36□□□□□ -0.43
CCDC43-201ENST00000315286 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
CCDC43-201ENST00000315286 TRAV13-2A0A0B4J235 113 aa12.35□□□□□ -0.43
CCDC43-201ENST00000315286 LINC01620Q4KN68 170 aa12.35□□□□□ -0.43
CCDC43-201ENST00000315286 C9orf116Q5BN46 136 aaPredicted RBP12.35□□□□□ -0.43
CCDC43-201ENST00000315286 SLC25A20O43772 301 aa12.34□□□□□ -0.43
CCDC43-201ENST00000315286 C10orf25Q5T742 122 aa12.34□□□□□ -0.43
CCDC43-201ENST00000315286 COX17Q14061 63 aa12.33□□□□□ -0.44
CCDC43-201ENST00000315286 UNQ6190/PRO20217Q6UXQ8 127 aa12.33□□□□□ -0.44
CCDC43-201ENST00000315286 LINC01556Q5JQF7 62 aa12.33□□□□□ -0.44
CCDC43-201ENST00000315286 KRTAP26-1Q6PEX3 210 aa12.33□□□□□ -0.44
CCDC43-201ENST00000315286 LST1O00453 97 aa12.31□□□□□ -0.44
CCDC43-201ENST00000315286 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
CCDC43-201ENST00000315286 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
CCDC43-201ENST00000315286 TEN1Q86WV5 123 aa12.3□□□□□ -0.44
CCDC43-201ENST00000315286 DNAH9Q9NYC9 4486 aa12.29□□□□□ -0.44
CCDC43-201ENST00000315286 COL7A1Q02388 2944 aa12.28□□□□□ -0.44
CCDC43-201ENST00000315286 TRBV10-2A0A0K0K1G8 114 aa12.28□□□□□ -0.44
CCDC43-201ENST00000315286 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
CCDC43-201ENST00000315286 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
CCDC43-201ENST00000315286 M0QXV9 152 aa12.28□□□□□ -0.44
CCDC43-201ENST00000315286 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
CCDC43-201ENST00000315286 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
CCDC43-201ENST00000315286 LINC00588Q9Y4M8 146 aa12.27□□□□□ -0.45
CCDC43-201ENST00000315286 SMIM11BQ8TCY0 68 aa12.26□□□□□ -0.45
CCDC43-201ENST00000315286 CARD19Q96LW7 228 aa12.26□□□□□ -0.45
CCDC43-201ENST00000315286 J3QR89 54 aa12.26□□□□□ -0.45
CCDC43-201ENST00000315286 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
CCDC43-201ENST00000315286 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
CCDC43-201ENST00000315286 LINC01600Q96MT4 127 aa12.25□□□□□ -0.45
CCDC43-201ENST00000315286 C1orf43Q9BWL3 253 aa12.25□□□□□ -0.45
CCDC43-201ENST00000315286 STAB2Q8WWQ8 2551 aa12.25□□□□□ -0.45
CCDC43-201ENST00000315286 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
CCDC43-201ENST00000315286 CBY1Q9Y3M2 126 aa12.25□□□□□ -0.45
CCDC43-201ENST00000315286 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
CCDC43-201ENST00000315286 C6orf48Q9UBA6 75 aa12.24□□□□□ -0.45
CCDC43-201ENST00000315286 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
CCDC43-201ENST00000315286 GVQW2A0A096LPI5 108 aaPredicted RBP12.23□□□□□ -0.45
CCDC43-201ENST00000315286 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
CCDC43-201ENST00000315286 NDUFC2O95298 119 aa12.23□□□□□ -0.45
CCDC43-201ENST00000315286 C15orf56Q8N910 161 aa12.23□□□□□ -0.45
CCDC43-201ENST00000315286 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
CCDC43-201ENST00000315286 Q8NDZ9 215 aa12.22□□□□□ -0.45
CCDC43-201ENST00000315286 Q9HAA7 133 aa12.22□□□□□ -0.45
CCDC43-201ENST00000315286 H3BT86 120 aa12.2□□□□□ -0.46
CCDC43-201ENST00000315286 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
CCDC43-201ENST00000315286 CAMK2N2Q96S95 79 aa12.2□□□□□ -0.46
CCDC43-201ENST00000315286 TRACP01848 142 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms