RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 COMMD7Q86VX2 200 aa9.56□□□□□ -0.88
FANCA-201ENST00000305699 Q8IZM0 81 aa9.56□□□□□ -0.88
FANCA-201ENST00000305699 GNB1LQ9BYB4 327 aa9.56□□□□□ -0.88
FANCA-201ENST00000305699 CDKN2A-AS1Q9UH64 79 aa9.56□□□□□ -0.88
FANCA-201ENST00000305699 LRP2P98164 4655 aa9.55□□□□□ -0.88
FANCA-201ENST00000305699 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
FANCA-201ENST00000305699 ERASQ7Z444 233 aa9.55□□□□□ -0.88
FANCA-201ENST00000305699 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
FANCA-201ENST00000305699 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
FANCA-201ENST00000305699 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
FANCA-201ENST00000305699 DIRC1Q969H9 104 aa9.54□□□□□ -0.88
FANCA-201ENST00000305699 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
FANCA-201ENST00000305699 FABP9Q0Z7S8 132 aa9.52□□□□□ -0.89
FANCA-201ENST00000305699 COX19Q49B96 90 aa9.52□□□□□ -0.89
FANCA-201ENST00000305699 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
FANCA-201ENST00000305699 LINC01549A6NIU2 74 aa9.51□□□□□ -0.89
FANCA-201ENST00000305699 F8VRH5 84 aa9.51□□□□□ -0.89
FANCA-201ENST00000305699 FA2HQ7L5A8 372 aa9.51□□□□□ -0.89
FANCA-201ENST00000305699 MRPL18Q9H0U6 180 aaKnown RBP9.51□□□□□ -0.89
FANCA-201ENST00000305699 RPS10P5Q9NQ39 176 aa9.51□□□□□ -0.89
FANCA-201ENST00000305699 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
FANCA-201ENST00000305699 CXCL5P42830 114 aa9.49□□□□□ -0.89
FANCA-201ENST00000305699 RHEBQ15382 184 aa9.49□□□□□ -0.89
FANCA-201ENST00000305699 TINCRA0A1B0GVN0 87 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 SMIM1B2RUZ4 78 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 H0Y9J4 135 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 PMVKQ15126 192 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 PDZD11Q5EBL8 140 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 C10orf91Q5T1B1 145 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 COX7B2Q8TF08 81 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
FANCA-201ENST00000305699 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
FANCA-201ENST00000305699 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
FANCA-201ENST00000305699 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
FANCA-201ENST00000305699 C22orf24Q9Y442 160 aa9.46□□□□□ -0.9
FANCA-201ENST00000305699 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
FANCA-201ENST00000305699 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
FANCA-201ENST00000305699 NDUFA6P56556 154 aa9.44□□□□□ -0.9
FANCA-201ENST00000305699 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
FANCA-201ENST00000305699 H3BRM9 83 aa9.43□□□□□ -0.9
FANCA-201ENST00000305699 RAB5BP61020 215 aa9.42□□□□□ -0.9
FANCA-201ENST00000305699 NUPR1O60356 82 aa9.41□□□□□ -0.9
FANCA-201ENST00000305699 APOC3P02656 99 aa9.41□□□□□ -0.9
FANCA-201ENST00000305699 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
FANCA-201ENST00000305699 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
FANCA-201ENST00000305699 LINC00614P0C842 121 aa9.4□□□□□ -0.9
FANCA-201ENST00000305699 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
FANCA-201ENST00000305699 TP73-AS1Q9UF72 201 aa9.4□□□□□ -0.9
FANCA-201ENST00000305699 ZNF861PO60384 105 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 ATP5LO75964 103 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 HBDP02042 147 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 A0A096LNJ9 63 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 PMCHL1Q16048 86 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
FANCA-201ENST00000305699 RPL37AP8A6NKH3 93 aa9.38□□□□□ -0.91
FANCA-201ENST00000305699 SNAPINO95295 136 aa9.38□□□□□ -0.91
FANCA-201ENST00000305699 GAGE10A6NGK3 116 aa9.37□□□□□ -0.91
FANCA-201ENST00000305699 SVBPQ8N300 66 aa9.37□□□□□ -0.91
FANCA-201ENST00000305699 NKAPP1Q8N9T2 125 aa9.37□□□□□ -0.91
FANCA-201ENST00000305699 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
FANCA-201ENST00000305699 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
FANCA-201ENST00000305699 PFN2P35080 140 aa9.36□□□□□ -0.91
FANCA-201ENST00000305699 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
FANCA-201ENST00000305699 BCE1O60756 84 aa9.35□□□□□ -0.91
FANCA-201ENST00000305699 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
FANCA-201ENST00000305699 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
FANCA-201ENST00000305699 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
FANCA-201ENST00000305699 TMEM170BQ5T4T1 132 aa9.33□□□□□ -0.92
FANCA-201ENST00000305699 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
FANCA-201ENST00000305699 C11orf86A6NJI1 115 aa9.32□□□□□ -0.92
FANCA-201ENST00000305699 ZNF625Q96I27 306 aaPredicted RBP9.31□□□□□ -0.92
FANCA-201ENST00000305699 ERG28Q9UKR5 140 aa9.31□□□□□ -0.92
FANCA-201ENST00000305699 LPAP08519 4548 aa9.31□□□□□ -0.92
FANCA-201ENST00000305699 SCO1O75880 301 aa9.31□□□□□ -0.92
FANCA-201ENST00000305699 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
FANCA-201ENST00000305699 IGKV2-28A0A075B6P5 120 aa9.3□□□□□ -0.92
FANCA-201ENST00000305699 IGKV2D-28P01615 120 aa9.3□□□□□ -0.92
FANCA-201ENST00000305699 UBE2AP49459 152 aa9.3□□□□□ -0.92
FANCA-201ENST00000305699 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
FANCA-201ENST00000305699 COX17Q14061 63 aa9.28□□□□□ -0.92
FANCA-201ENST00000305699 SFTA2Q6UW10 78 aa9.28□□□□□ -0.92
FANCA-201ENST00000305699 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
FANCA-201ENST00000305699 CHCHD1Q96BP2 118 aaKnown RBP9.27□□□□□ -0.93
FANCA-201ENST00000305699 VPREB1P12018 145 aa9.26□□□□□ -0.93
FANCA-201ENST00000305699 YPEL4Q96NS1 127 aa9.26□□□□□ -0.93
FANCA-201ENST00000305699 CRYGAP11844 174 aa9.25□□□□□ -0.93
FANCA-201ENST00000305699 PRR4Q16378 134 aa9.25□□□□□ -0.93
FANCA-201ENST00000305699 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
FANCA-201ENST00000305699 A0A087X002 238 aa9.24□□□□□ -0.93
FANCA-201ENST00000305699 LINC00158P58513 81 aa9.24□□□□□ -0.93
FANCA-201ENST00000305699 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
FANCA-201ENST00000305699 HSBP1O75506 76 aa9.23□□□□□ -0.93
FANCA-201ENST00000305699 TSPAN13O95857 204 aa9.23□□□□□ -0.93
FANCA-201ENST00000305699 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
FANCA-201ENST00000305699 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms