RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 S100PP25815 95 aa10.14□□□□□ -0.79
TRAPPC1-201ENST00000303731 CXCL5P42830 114 aa10.14□□□□□ -0.79
TRAPPC1-201ENST00000303731 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
TRAPPC1-201ENST00000303731 COX19Q49B96 90 aa10.13□□□□□ -0.79
TRAPPC1-201ENST00000303731 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
TRAPPC1-201ENST00000303731 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
TRAPPC1-201ENST00000303731 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
TRAPPC1-201ENST00000303731 F8VRH5 84 aa10.12□□□□□ -0.79
TRAPPC1-201ENST00000303731 ADCYAP1P18509 176 aa10.12□□□□□ -0.79
TRAPPC1-201ENST00000303731 SCGB3A1Q96QR1 104 aa10.12□□□□□ -0.79
TRAPPC1-201ENST00000303731 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
TRAPPC1-201ENST00000303731 KIAA1644Q3SXP7 199 aa10.11□□□□□ -0.79
TRAPPC1-201ENST00000303731 KRTAP11-1Q8IUC1 163 aa10.11□□□□□ -0.79
TRAPPC1-201ENST00000303731 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
TRAPPC1-201ENST00000303731 LINC01546A6NGU7 62 aa10.1□□□□□ -0.79
TRAPPC1-201ENST00000303731 LBHQ53QV2 105 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC1-201ENST00000303731 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
TRAPPC1-201ENST00000303731 NUPR1O60356 82 aa10.09□□□□□ -0.79
TRAPPC1-201ENST00000303731 PDZD11Q5EBL8 140 aa10.09□□□□□ -0.79
TRAPPC1-201ENST00000303731 LINC00469Q8N7U9 141 aa10.09□□□□□ -0.79
TRAPPC1-201ENST00000303731 TP73-AS1Q9UF72 201 aa10.08□□□□□ -0.8
TRAPPC1-201ENST00000303731 IGLV5-45A0A087WSX0 123 aa10.07□□□□□ -0.8
TRAPPC1-201ENST00000303731 PRR26Q8N8Z3 221 aa10.07□□□□□ -0.8
TRAPPC1-201ENST00000303731 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
TRAPPC1-201ENST00000303731 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
TRAPPC1-201ENST00000303731 RPL13AP40429 203 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-201ENST00000303731 XAGE1AQ9HD64 81 aa10.06□□□□□ -0.8
TRAPPC1-201ENST00000303731 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
TRAPPC1-201ENST00000303731 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
TRAPPC1-201ENST00000303731 CST9LQ9H4G1 147 aa10.05□□□□□ -0.8
TRAPPC1-201ENST00000303731 SMCO4Q9NRQ5 59 aa10.05□□□□□ -0.8
TRAPPC1-201ENST00000303731 ZNF861PO60384 105 aa10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 KRTAP1-4P0C5Y4 121 aa10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 IFITM2Q01629 132 aa10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 PMVKQ15126 192 aa10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 RHEBQ15382 184 aa10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 CARHSP1Q9Y2V2 147 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-201ENST00000303731 H3BRM9 83 aa10.03□□□□□ -0.8
TRAPPC1-201ENST00000303731 MRPL55Q7Z7F7 128 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-201ENST00000303731 FABP9Q0Z7S8 132 aa10.02□□□□□ -0.81
TRAPPC1-201ENST00000303731 C10orf91Q5T1B1 145 aa10.01□□□□□ -0.81
TRAPPC1-201ENST00000303731 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
TRAPPC1-201ENST00000303731 RPL28P46779 137 aaKnown RBP10□□□□□ -0.81
TRAPPC1-201ENST00000303731 RPS10P5Q9NQ39 176 aa9.99□□□□□ -0.81
TRAPPC1-201ENST00000303731 RNF213Q63HN8 5207 aa9.99□□□□□ -0.81
TRAPPC1-201ENST00000303731 BCE1O60756 84 aa9.98□□□□□ -0.81
TRAPPC1-201ENST00000303731 ATP5LO75964 103 aa9.98□□□□□ -0.81
TRAPPC1-201ENST00000303731 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
TRAPPC1-201ENST00000303731 IGLV5-37A0A075B6J1 123 aa9.97□□□□□ -0.81
TRAPPC1-201ENST00000303731 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
TRAPPC1-201ENST00000303731 NKAPP1Q8N9T2 125 aa9.96□□□□□ -0.82
TRAPPC1-201ENST00000303731 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
TRAPPC1-201ENST00000303731 IGLV5-39A0A0G2JS06 123 aa9.94□□□□□ -0.82
TRAPPC1-201ENST00000303731 HBDP02042 147 aa9.94□□□□□ -0.82
TRAPPC1-201ENST00000303731 LINC00614P0C842 121 aa9.94□□□□□ -0.82
TRAPPC1-201ENST00000303731 RAB5BP61020 215 aa9.94□□□□□ -0.82
TRAPPC1-201ENST00000303731 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
TRAPPC1-201ENST00000303731 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
TRAPPC1-201ENST00000303731 NDUFA6P56556 154 aa9.93□□□□□ -0.82
TRAPPC1-201ENST00000303731 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
TRAPPC1-201ENST00000303731 A0A096LNJ9 63 aa9.92□□□□□ -0.82
TRAPPC1-201ENST00000303731 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
TRAPPC1-201ENST00000303731 COX17Q14061 63 aa9.92□□□□□ -0.82
TRAPPC1-201ENST00000303731 LPAP08519 4548 aa9.92□□□□□ -0.82
TRAPPC1-201ENST00000303731 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC1-201ENST00000303731 GAGE10A6NGK3 116 aa9.9□□□□□ -0.82
TRAPPC1-201ENST00000303731 CRYGAP11844 174 aa9.9□□□□□ -0.82
TRAPPC1-201ENST00000303731 PFN2P35080 140 aa9.89□□□□□ -0.83
TRAPPC1-201ENST00000303731 UBE2AP49459 152 aa9.89□□□□□ -0.83
TRAPPC1-201ENST00000303731 NDUFA5Q16718 116 aa9.89□□□□□ -0.83
TRAPPC1-201ENST00000303731 URB1-AS1Q96HZ7 61 aa9.89□□□□□ -0.83
TRAPPC1-201ENST00000303731 ERG28Q9UKR5 140 aa9.89□□□□□ -0.83
TRAPPC1-201ENST00000303731 SNAPINO95295 136 aa9.88□□□□□ -0.83
TRAPPC1-201ENST00000303731 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-201ENST00000303731 SVBPQ8N300 66 aa9.88□□□□□ -0.83
TRAPPC1-201ENST00000303731 APOC3P02656 99 aa9.87□□□□□ -0.83
TRAPPC1-201ENST00000303731 BAGE3Q86Y29 109 aa9.87□□□□□ -0.83
TRAPPC1-201ENST00000303731 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
TRAPPC1-201ENST00000303731 PRR4Q16378 134 aa9.86□□□□□ -0.83
TRAPPC1-201ENST00000303731 TMEM170BQ5T4T1 132 aa9.86□□□□□ -0.83
TRAPPC1-201ENST00000303731 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
TRAPPC1-201ENST00000303731 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
TRAPPC1-201ENST00000303731 IGKV2-28A0A075B6P5 120 aa9.85□□□□□ -0.83
TRAPPC1-201ENST00000303731 A0A087X002 238 aa9.85□□□□□ -0.83
TRAPPC1-201ENST00000303731 IGKV2D-28P01615 120 aa9.85□□□□□ -0.83
TRAPPC1-201ENST00000303731 PMCHL1Q16048 86 aa9.85□□□□□ -0.83
TRAPPC1-201ENST00000303731 FAM229BQ4G0N7 80 aa9.85□□□□□ -0.83
TRAPPC1-201ENST00000303731 C11orf86A6NJI1 115 aa9.84□□□□□ -0.83
TRAPPC1-201ENST00000303731 VPREB1P12018 145 aa9.84□□□□□ -0.83
TRAPPC1-201ENST00000303731 CHCHD1Q96BP2 118 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-201ENST00000303731 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-201ENST00000303731 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC1-201ENST00000303731 TRAV12-1A0A0B4J245 112 aa9.81□□□□□ -0.84
TRAPPC1-201ENST00000303731 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
TRAPPC1-201ENST00000303731 SCO1O75880 301 aa9.8□□□□□ -0.84
TRAPPC1-201ENST00000303731 TSPAN13O95857 204 aa9.8□□□□□ -0.84
TRAPPC1-201ENST00000303731 FAM19A1Q7Z5A9 133 aa9.8□□□□□ -0.84
TRAPPC1-201ENST00000303731 CTAG1AP78358 180 aa9.79□□□□□ -0.84
TRAPPC1-201ENST00000303731 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms