RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
PRDM9-201ENST00000296682 FOXI1Q12951 378 aa6.5□□□□□ -1.37
PRDM9-201ENST00000296682 CARD19Q96LW7 228 aa6.5□□□□□ -1.37
PRDM9-201ENST00000296682 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
PRDM9-201ENST00000296682 SOSTDC1Q6X4U4 206 aa6.49□□□□□ -1.37
PRDM9-201ENST00000296682 SBSPONQ8IVN8 264 aa6.49□□□□□ -1.37
PRDM9-201ENST00000296682 REG3AQ06141 175 aa6.48□□□□□ -1.37
PRDM9-201ENST00000296682 A0A0B4J2C4 111 aa6.48□□□□□ -1.37
PRDM9-201ENST00000296682 DNAL4O96015 105 aa6.48□□□□□ -1.37
PRDM9-201ENST00000296682 CHCHD10Q8WYQ3 142 aaPredicted RBP6.48□□□□□ -1.37
PRDM9-201ENST00000296682 LITAFQ99732 161 aa6.48□□□□□ -1.37
PRDM9-201ENST00000296682 CSDC2Q9Y534 153 aaKnown RBP6.48□□□□□ -1.37
PRDM9-201ENST00000296682 MRPL23Q16540 153 aaKnown RBP6.48□□□□□ -1.37
PRDM9-201ENST00000296682 TEN1Q86WV5 123 aa6.48□□□□□ -1.37
PRDM9-201ENST00000296682 PPDPFLQ8WWR9 84 aa6.47□□□□□ -1.37
PRDM9-201ENST00000296682 COX7A2LO14548 114 aa6.47□□□□□ -1.37
PRDM9-201ENST00000296682 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
PRDM9-201ENST00000296682 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
PRDM9-201ENST00000296682 KIR2DL5BQ8NHK3 375 aa6.46□□□□□ -1.37
PRDM9-201ENST00000296682 IFITM1P13164 125 aa6.46□□□□□ -1.38
PRDM9-201ENST00000296682 KRTAP24-1Q3LI83 254 aa6.46□□□□□ -1.38
PRDM9-201ENST00000296682 SMIM9A6NGZ8 99 aa6.46□□□□□ -1.38
PRDM9-201ENST00000296682 SLPIP03973 132 aa6.46□□□□□ -1.38
PRDM9-201ENST00000296682 NANOS2P60321 138 aaKnown RBP6.46□□□□□ -1.38
PRDM9-201ENST00000296682 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
PRDM9-201ENST00000296682 LYRM9A8MSI8 78 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 Q6ZTC4 211 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 COPS9Q8WXC6 57 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 SPANXCQ9NY87 97 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 NCR3O14931 201 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 HERV-K104P63124 156 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 LINC00612Q8N6U2 182 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
PRDM9-201ENST00000296682 IGLV5-39A0A0G2JS06 123 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 CCL18P55774 89 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 TRAV8-4A0A0B4J246 113 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 TIMM17BO60830 172 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 MIFP14174 115 aa6.44□□□□□ -1.38
PRDM9-201ENST00000296682 A0A0J9YWU9 116 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 KPRPQ5T749 579 aaPredicted RBP6.43□□□□□ -1.38
PRDM9-201ENST00000296682 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 H7C423 109 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
PRDM9-201ENST00000296682 TTC32Q5I0X7 151 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 A0A087WZ39 114 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 TRBV10-2A0A0K0K1G8 114 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 LECT2O14960 151 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 WFDC10BQ8IUB3 73 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
PRDM9-201ENST00000296682 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
PRDM9-201ENST00000296682 SNCGO76070 127 aa6.41□□□□□ -1.38
PRDM9-201ENST00000296682 KRTAP10-11P60412 298 aa6.41□□□□□ -1.38
PRDM9-201ENST00000296682 Q8NAQ8 132 aa6.41□□□□□ -1.38
PRDM9-201ENST00000296682 TRAV13-2A0A0B4J235 113 aa6.41□□□□□ -1.38
PRDM9-201ENST00000296682 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
PRDM9-201ENST00000296682 DEFB131BA0A096LNP1 70 aa6.4□□□□□ -1.38
PRDM9-201ENST00000296682 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
PRDM9-201ENST00000296682 C15orf53Q8NAA6 179 aa6.4□□□□□ -1.38
PRDM9-201ENST00000296682 C11orf45Q8TAV5 145 aa6.4□□□□□ -1.38
PRDM9-201ENST00000296682 XGP55808 180 aa6.39□□□□□ -1.39
PRDM9-201ENST00000296682 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
PRDM9-201ENST00000296682 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
PRDM9-201ENST00000296682 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
PRDM9-201ENST00000296682 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
PRDM9-201ENST00000296682 LST1O00453 97 aa6.38□□□□□ -1.39
PRDM9-201ENST00000296682 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
PRDM9-201ENST00000296682 CAMK2N2Q96S95 79 aa6.38□□□□□ -1.39
PRDM9-201ENST00000296682 CYSRT1A8MQ03 144 aa6.38□□□□□ -1.39
PRDM9-201ENST00000296682 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
PRDM9-201ENST00000296682 WIPF1O43516 503 aa6.37□□□□□ -1.39
PRDM9-201ENST00000296682 LYPD5Q6UWN5 251 aa6.37□□□□□ -1.39
PRDM9-201ENST00000296682 SPATA25Q9BR10 227 aa6.37□□□□□ -1.39
PRDM9-201ENST00000296682 WFDC9Q8NEX5 89 aa6.37□□□□□ -1.39
PRDM9-201ENST00000296682 A0A087WYN8 130 aa6.37□□□□□ -1.39
PRDM9-201ENST00000296682 LELP1Q5T871 98 aa6.37□□□□□ -1.39
PRDM9-201ENST00000296682 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
PRDM9-201ENST00000296682 IGKV2-28A0A075B6P5 120 aa6.36□□□□□ -1.39
PRDM9-201ENST00000296682 A0A1B0GUV1 79 aa6.36□□□□□ -1.39
PRDM9-201ENST00000296682 IGKV2D-28P01615 120 aa6.36□□□□□ -1.39
PRDM9-201ENST00000296682 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
PRDM9-201ENST00000296682 C14orf132Q9NPU4 83 aa6.36□□□□□ -1.39
PRDM9-201ENST00000296682 C6orf99Q4VX62 202 aa6.35□□□□□ -1.39
PRDM9-201ENST00000296682 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
PRDM9-201ENST00000296682 SS18L2Q9UHA2 77 aa6.35□□□□□ -1.39
PRDM9-201ENST00000296682 CDIP1Q9H305 208 aa6.35□□□□□ -1.39
PRDM9-201ENST00000296682 ESRGQ1W209 222 aa6.34□□□□□ -1.39
PRDM9-201ENST00000296682 Q8IZM0 81 aa6.34□□□□□ -1.39
PRDM9-201ENST00000296682 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.4
PRDM9-201ENST00000296682 LAMTOR3Q9UHA4 124 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms